Geology Reports⌕ Search

SEARCH · Geology Reports

Results for “Journal of Nature Conservation”

Search indexed USGS publications on groundwater, aquifers, geologic maps, mineral resources and earthquakes. Explore source records by subject and place.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 181 records · Page 10Linked to original sources
USGS2017

Greater sage-grouse population trends across Wyoming

The scale at which analyses are performed can have an effect on model results and often one scale does not accurately describe the ecological phenomena of interest (e.g., population trends) for wide-ranging species: yet, most ecological studies are performed at a single, arbitrary scale. To best determine local and regional trends for greater sage-grouse ( Centrocercus urophasianus ) in Wyoming, USA, we modeled density-independent and -dependent population growth across multiple spatial scales relevant to management and conservation (Core Areas [habitat encompassing approximately 83% of the sage-grouse population on ∼24% of surface area in Wyoming], local Working Groups [7 regional areas for which groups of local experts are tasked with implementing Wyoming's statewide sage-grouse conservation plan at the local level], Core Area status (Core Area vs. Non-Core Area) by Working Groups, and Core Areas by Working Groups). Our goal was to determine the influence of fine-scale population trends (Core Areas) on larger-scale populations (Working Group Areas). We modeled the natural log of change in population size ( peak M lek counts) by time to calculate the finite rate of population growth ( λ ) for each population of interest from 1993 to 2015. We found that in general when Core Area status (Core Area vs. Non-Core Area) was investigated by Working Group Area, the 2 populations trended similarly and agreed with the overall trend of the Working Group Area. However, at the finer scale where Core Areas were analyzed separately, Core Areas within the same Working Group Area often trended differently and a few large Core Areas could influence the overall Working Group Area trend and mask trends occurring in smaller Core Areas. Relatively close fine-scale populations of sage-grouse can trend differently, indicating that large-scale trends may not accurately depict what is occurring across the landscape (e.g., local effects of gas and oil fields may be masked by increasing larger populations).

Wyoming↗
USGS2012

Colonizing the world in spite of reduced MHC variation

Reduced immune gene diversity is thought to negatively affect the capacity of organisms to adapt to pathogen challenges, which represent a major force in natural selection. Genes of the Major Histocompatibility Complex (MHC) are the most widely invoked adaptive loci in conservation biology, and have become the most popular genetic markers to investigate pathogen-host interactions in vertebrates. Although MHC genes are the most polymorphic genes described in the vertebrate genome, the extent to which MHC diversity determines the long-term persistence of populations is, unclear and often debated, as recent studies have documented the occurrence of natural populations thriving even after a depletion of MHC diversity caused by genetic drift. Here, we show that some phylogenetically related species belonging to the Falco genus (Aves: Falconidae) present a dramatically low MHC variability that has not precluded, nevertheless, the successful colonization of almost all existing regions and habitats worldwide. We found evidence for two remarkably different patterns of MHC variation within the genus. While kestrels show a high MHC variation according to the general theory, falcons exhibit an ancestrally low intra- and inter-specific MHC allelic diversity. We provide compelling evidence that this pattern is not caused by the degeneration of functional genes into pseudogenes, the inadvertent analyses of paralogous MHC genes, or the devastating action of genetic drift. Instead, our results strongly support the idea of an evolutionary transition driven and maintained by natural selection from primarily highly variable towards low polymorphic, but functional and expressed, MHC genes with species-specific pathogen-recognition capabilities.

Journal of Evolutionary Biology↗
USGS2003

Genetic comparison of lake sturgeon populations: Differentiation based on allelic frequencies at seven microsatellite loci

The lake sturgeon (Acipenser fulvescens) has recently become a high priority for restoration management because of the near extinction of the species from many areas of North America. The identification of the level of population differentiation that naturally exists among lake sturgeon populations will be useful in the development of management plans to conserve and restore diversity, and in the choice of donor populations to use for re-introduction. Genetic variation among and within 210 lake sturgeon collected from seven locations (St. Lawrence River, Des Prairies River (tributary to the St. Lawrence River), Mattagami River (Hudson Bay drainage), Menominee River (Lake Michigan drainage), Wolf River (Lake Michigan drainage), Niagara River, and Lake Erie) was examined based on allelic variation at seven microsatellite loci (four disomic and three putative tetrasomic). High levels of variability were detected at these loci. Analyses revealed an average of 8.6 alleles per locus (range 5 to 12 alleles per locus) and heterozygosity values at the four disomic loci ranging from 0.46 to 0.66. Multivariate factor analysis of Nei's genetic distance values produced three distinct population groups that were organized by geography: 1) Mattagami (northern Quebec), 2) Menominee/ Wolf (Lake Michigan - Wisconsin), and 3) St. Lawrence/ Des Prairies/ Niagara/ Erie (lower Great Lakes). Differences based on G-tests summed over all loci occurred between all possible paired comparisons of the collections (P < 0.01). These analyses indicated that lake sturgeon populations are differentiated within the Great Lakes basin. Managers of this species will need to identify individual populations in their jurisdictions and provide separate consideration for their conservation and rehabilitation.

Journal of Great Lakes Research↗
USGS2025

Evidence for size‐based predation risk during Atlantic salmon (Salmo salar) smolt migration.

Hatchery supplementation is frequently employed during the conservation and recovery of imperilled salmon populations. At the smolt stage, hatchery rearing practices often produce individuals that are larger than wild conspecifics. Under this ‘bigger is better’ strategy, it is assumed that larger fish are less susceptible to predation during migration. We tested this hypothesis on hatchery-reared Atlantic salmon ( Salmo salar ) smolts with fork lengths representative of those of natural and hatchery origins, allowing us to isolate the influence of size from rearing history. From May to June 2023 we characterized predation risk for acoustic-tagged ( n = 50) and tethered ( n = 192) smolts of various sizes through a mostly free-flowing section of the Penobscot River, Maine, USA. Across both methods, more than 50% of smolts were predated, with the majority of predation events being attributed to smallmouth bass ( Micropterus dolomieu ). Tethered smolts of all sizes experienced similar predation risk. In the acoustic telemetry component of this study, smaller, wild-sized smolts incurred greater overall mortality relative to standard hatchery sizes (95% vs. 75%), the majority of which occurred within 3 km of the release site. Collectively, these results allude to a strong predation influence imposed by smallmouth bass on smolts in freshwater sections of the Penobscot River and small-bodied migrants may incur greater predation risk, particularly near stocking sites.

Journal of Fish Biology↗
USGS2022

Distribution probability of the Virginia northern flying squirrel in the High Allegheny Mountains

In the central Appalachians of Virginia and West Virginia, the Virginia northern flying squirrel ( Glaucomys sabrinus fuscus ; VNFS) is a subspecies of northern flying squirrel generally associated with red spruce ( Picea rubens )-dominated forests at high elevations. Listed as endangered by the U.S. Fish and Wildlife Service from 1985 to 2013, the VNFS currently is the subject of a 10-year post-delisting assessment. Still considered a state-listed species in Virginia and a species of greatest conservation need in West Virginia, the VNFS serves as a focal target for red spruce restoration activities in the High Allegheny Region (HAR) of the two states. Owing to the cryptic nature of VNFS and its low detection probability in live-capture surveys, managers in the region rely on habitat models to assess probable presence. Using long-term nest-box, live-trapping, and radio-telemetry data matched with updated high elevation forest-type coverage data for the region, we created a new VNFS resource selection function and spatial coverage map. Inputting red spruce cover, increasing elevation, and decreasing landform index (increasing site shelteredness) composed the best model explaining VNFS occurrence. The calculated amount of low-quality habitat was congruent with previous modeling efforts; however, inclusion of more VNFS occurrence records in the current effort indicated that previous efforts substantially underestimated the amount (>400%) of extant high quality VNFS habitat. We estimate the HAR to contain approximately 197,952 ha with ≥0.50 predicted probability of occurrence of VNFS. In addition to potentially improving current and future VNFS live-capture surveys, with this model managers may better target forests for red spruce restoration to increase high elevation forest ecological integrity and to improve habitat patch connectedness for VNFS.

Maryland, Virginia, West Virginia↗
USGS2011

Long-term population dynamics of a managed burrowing owl colony

We analyzed the population dynamics of a burrowing owl (Athene cunicularia) colony at Mineta San Jose International Airport in San Jose, California, USA from 1990-2007. This colony was managed by using artificial burrows to reduce the occurrence of nesting owls along runways and within major airport improvement projects during the study period. We estimated annual reproduction in natural and artificial burrows and age-specific survival rates with mark-recapture techniques, and we estimated the relative contribution of these vital rates to population dynamics using a life table response experiment. The breeding colony showed 2 distinct periods of change: high population growth from 7 nesting pairs in 1991 to 40 pairs in 2002 and population decline to 17 pairs in 2007. Reproduction was highly variable: annual nesting success (pairs that raised =1 young) averaged 79% and ranged from 36% to 100%, whereas fecundity averaged 3.36 juveniles/pair and ranged from 1.43 juveniles/pair to 4.54 juveniles/pair. We estimated annual adult survival at 0.710 during the period of colony increase from 1996 to 2001 and 0.465 during decline from 2002 to 2007, but there was no change in annual survival of juveniles between the 2 time periods. Long-term population growth rate (lambda) estimated from average vital rates was lambda a =1.072 with lambda i =1.288 during colony increase and lambda d =0.921 (DELTA lambda=0.368) during decline. A life table response experiment showed that change in adult survival rate during increasing and declining phases explained more than twice the variation in growth rate than other vital rates. Our findings suggest that management and conservation of declining burrowing owl populations should address factors that influence adult survival.

California↗
USGS2016

How will predicted land-use change affect waterfowl spring stopover ecology? Inferences from an individual-based model

Habitat loss, habitat fragmentation, overexploitation and climate change pose familiar and new challenges to conserving natural populations throughout the world. One approach conservation planners may use to evaluate the effects of these challenges on wildlife populations is scenario planning. We developed an individual-based model to evaluate the effects of future land use and land cover changes on spring-migrating dabbling ducks in North America. We assessed the effects of three Intergovernmental Panel on Climate Change emission scenarios (A1B, A2 and B1) on dabbling duck stopover duration, movement distances and mortality. We specifically focused on migration stopover duration because previous research has demonstrated that individuals arriving earlier on the nesting grounds exhibit increased reproductive fitness. Compared to present conditions, all three scenarios increased stopover duration and movement distances of agent ducks. Although all three scenarios presented migrating ducks with increased amounts of wetland habitat, scenarios also contained substantially less cropland, which decreased overall carrying capacity of the study area. Synthesis and applications . Land-use change may increase waterfowl spring migration stopover duration in the midcontinent region of North America due to reduced landscape energetic carrying capacity. Climate change will alter spatial patterns of crop distributions with corn and rice production areas shifting to different regions. Thus, conservation planners will have to address population-level energetic implications of shifting agricultural food resources and increased uncertainty in yearly precipitation patterns within the next 50 years.

Journal of Applied Ecology↗
USGS2019

Diversity and abundance of wild bees in an agriculturally dominated landscape of eastern Colorado

Agricultural intensification has resulted in loss of natural and semi-natural habitats impacting several important ecosystem services. One group of organisms that has suffered greatly are the bees and hence pollination, the supporting ecosystem service they complete. The United States Department of Agriculture (USDA) Conservation Reserve Program (CRP) has implemented conservation practices designed to improve habitat for pollinators in agroecosystems by paying to recover environmentally sensitive agricultural land from production, and restoring them by planting native grass mixes, pollinator-friendly legumes and wildflowers. Our study, aimed at demonstrating the efficacy of this practice, measured diversity and abundance of wild bee genera in the agricultural landscape of eastern semiarid regions of Colorado, USA, where CRP practices were implemented. Over our 3-year study, we obtained a total of 16,207 bees belonging to 51 genera. We found inconsistent differences in number of bee genera and abundance of bees in CRP fields supplemented with wildflowers compared to those with conventional grass seed mix. However, we observed only a 40–80% overlap in bee genera between fields supplemented with wildflowers and those with grass seed mixes indicating that diversity was enhanced by having both habitats. With the caveat that 3 years is a very short period to see appreciable changes, our results suggest that recovering environmentally sensitive land can strengthen pollinator populations in landscapes dominated by agricultural activities. In addition, periodic evaluation and maintenance of these recovered lands will further support the efforts towards revitalization of ecosystem services in these areas.

Colorado↗
USGS2004

Assessing biodiversity in Nuevo Leon, Mexico: Are nature reserves the answer?

The Mexican state of Nuevo Leon, located in the northeastern portion of the country, currently has 26 state and three federal nature reserves covering approximately 4.5% of its land area. These reserves were established for a variety of reasons not necessarily related to conservation purposes. In 2000 in response to a growing concern about the lack of organized conservation reserve planning to protect the important biological and physical features of Mexico, the Mexican Commission for Knowledge and Use of Biodiversity proposed 12 new terrestrial reserves for Nuevo Leon. The new reserves, if established, would increase the proportion of protected lands in the state to almost 24% of the state's land area. We compiled a Geographic Information System (GIS) analysis using digital thematic maps of physical and ecological features to examine how well the existing and proposed reserves incorporated the major biological and physical features of the state. The existing reserves are located primarily in regions with elevations > 1,000-1,500 m, on less productive soils, and are dominated by pine and oak forest cover types. As a result, the state's dominant biotic region - low elevation coastal plain with xeric scrub vegetation - is disproportionately under represented in the current reserve system. The new reserves would expand the protection of biophysical resources throughout the state. However, the inclusion of important resources in the low elevation coastal lands would still be limited.

Nuevo Leon↗
USGS2026

Exploring trip preference heterogeneity in away-from-home birdwatchers using a discrete choice experiment

Birdwatching has grown in popularity worldwide and birdwatchers have emerged as an important constituency for wildlife and habitat conservation. To help promote wetland conservation, agencies and managers need to understand birdwatchers' desired trip experiences. We conducted national web-based surveys of American and Canadian birdwatchers by employing a discrete choice experiment to explore birdwatching trip preferences. We also collected information about participation in birdwatching and recreation specialization. We used latent class analysis to identify groups of birdwatchers with similar preferences. Our analysis indicated that birdwatchers were not homogeneous in their preferences. The seven attributes and associated attribute levels that were presented to participants (travel distance, site naturalness, bird rarity, the presence of waterfowl and wetlands, ease of access, species diversity and the number of birds seen) were all relevant, to varying degrees, in decisions about whether to take a birdwatching trip. We identified five latent classes of birdwatchers in the United States and Canada. ‘Nature seekers’ prioritised setting naturalness; ‘local birdwatchers’ strongly preferred shorter travel distances; ‘list-focused birdwatchers’ prioritised bird rarity and diversity; whereas ‘site-focused birdwatchers’ prioritised on-site characteristics above bird-related characteristics; and ‘casual birdwatchers’ were most likely to opt out of taking a trip. We found variation in recreation specialization and avidity levels across all the classes. Some classes ( e.g. list-focused birdwatchers) tend to be more specialised and more avid than others ( e.g. casual and local birdwatchers). Recognising the diversity of birdwatcher trip preferences can help outdoor recreation and wildlife managers provide a variety of suitable settings, services, and experiences.

Journal of Outdoor Recreation and Tourism↗
USGS2018

A multiscale investigation of habitat use and within-river distribution of sympatric sand darter species

The western sand darter Ammocrypta clara, and eastern sand darter Ammocrypta pellucida, are sand-dwelling fishes of conservation concern. Past research has emphasized the importance of studying individual populations of conservation concern, while recent research has revealed the importance of incorporating landscape scale processes that structure habitat mosaics and local populations. We examined habitat use and distributions of western and eastern sand darters in the lower Elk River of West Virginia. At the sandbar habitat use scale, western sand darters were detected in sandbars with greater area, higher proportions of coarse grain sand and faster bottom current velocity, while the eastern sand darter used a wider range of sandbar habitats. The landscape scale analysis revealed that contributing drainage area was an important predictor for both species, while sinuosity, which presumably represents valley type, also contributed to the western sand darter’s habitat suitability. Sandbar quality (area, grain size, and velocity) and fluvial geomorphic variables (drainage area and valley type) are likely key driving factors structuring sand darter distributions in the Elk River. This multiscale study of within-river species distribution and habitat use is unique, given that only a few sympatric populations are known of western and eastern sand darters.

West Virginia↗
USGS2013

An evaluation of liquid ammonia (ammonium hydroxide) as a candidate piscicide

Eradication of populations of nonnative aquatic species for the purpose of reintroducing native fish is often difficult because very few effective tools are available for removing aquatic organisms. This creates the need to evaluate new chemicals that could be used as management tools for native fish conservation. Ammonia is a natural product of fish metabolism and is naturally present in the environment at low levels, yet is known to be toxic to most aquatic species. Our objective was to determine the feasibility of using liquid ammonia as a fisheries management tool by evaluating its effectiveness at killing undesirable aquatic species and its persistence in a pond environment. A suite of invasive aquatic species commonly found in the southwestern USA were introduced into two experimental outdoor ponds located at the Rocky Mountain Research Station in Flagstaff, Arizona. Each pond was treated with ammonium hydroxide (29%) at 38 ppm. This target concentration was chosen because previous studies using anhydrous ammonia reported incomplete fish kills in ponds at concentrations less than 30 ppm. Water quality was monitored for 49 d to determine how quickly the natural bacteria in the environment converted the ammonia to nitrate. Ammonia levels remained above 8 ppm for 24 and 18 d, respectively, in ponds 1 and 2. Nitrite levels in each pond began to rise approximately 14 d after dosing with ammonia and stayed above 5 ppm for an additional 21 d in pond 1 and 18 d in pond 2. After 49 d all water in both ponds was drained and no fish, crayfish, or tadpoles were found to have survived the treatment, but aquatic turtles remained alive and appeared unaffected. Liquid ammonia appears to be an effective tool for removing many problematic invasive aquatic species and may warrant further investigation as a piscicide.

North American Journal of Fisheries Management↗
USGS2023

Baiting and banding: Expert opinion on how bait trapping may influence the occurrence of highly pathogenic avian influenza (HPAI) among dabbling ducks

A Eurasian lineage highly pathogenic avian influenza virus (HPAIV) of the clade 2.3.4.4b (Goose/Guangdong lineage) was detected in migratory bird populations in North America in December 2021, and it, along with its reassortants, have since caused wild and domestic bird outbreaks across the continent. Relative to previous outbreaks, HPAIV cases among wild birds in 2022 exhibited wider geographic extent within North America and higher levels of mortality, suggesting the potential for population-level impacts. Given the possible conservation implications of HPAIV in wild birds, natural resource managers have sought guidance on actions that may mitigate negative effects of disease among North American bird populations, including modification of existing management practices. Banding of waterfowl is a critical tool for population management for several harvested species in North America, but some banding techniques, such as bait trapping, can lead to increased congregation of waterfowl, potentially altering HPAIV transmission. We used an expert opinion exercise to assess how bait trapping of dabbling ducks in Canada may influence HPAIV transmission and wild bird health. The expert group found that it is moderately likely that bait trapping of dabbling ducks in wetlands will significantly increase the transmission of HPAIV among individual ducks, but there is a low probability that this will result in significant population-level effects on North American dabbling ducks. Considering the lack of empirical work studying how capture and handling methods may change transmission of HPAIV among waterfowl, as well as the importance of bait trapping for waterfowl management in North America, future work should focus on filling knowledge gaps pertaining to the influence of baiting on HPAIV occurrence to better inform banding procedures and management decision making.

Journal of Wildlife Diseases↗
USGS2024

A genetic assessment of natural barriers for isolating a habitat network proposed for Greenback Cutthroat Trout reintroduction

Objective: Native inland trout conservation efforts rely on physical barriers to exclude nonnative salmonids from target habitats. We used genetic techniques to evaluate a series of natural waterfalls for their potential to serve as barriers to prevent nonnative salmonids from entering a proposed reintroduction area for federally threatened Greenback Cutthroat Trout Oncorhynchus virginalis stomias . Methods: Genetic samples were collected from nonnative Brook Trout Salvelinus fontinalis at 11 sampling reaches above and below natural waterfalls (height: ~1–3 m under base flow conditions) along a 33-km segment of Colorado's upper Cache la Poudre River near the outflow of the proposed reintroduction area. To evaluate whether upstream movement of Brook Trout is restricted by any of these waterfalls, we characterized longitudinal trends in genetic diversity along the river corridor and examined patterns of genetic differentiation and population structure in relation to waterfall locations using a panel of microsatellites. Result: We found no evidence that the waterfalls served as complete movement barriers for nonnative Brook Trout based on genetic clustering analyses, estimates of population differentiation, and longitudinal genetic patterns. Our multilocus assessment did not identify alleles restricted to downstream reaches, and the river segment was genetically homogenized. Conclusion: Our evaluation suggests that the existing waterfalls do not fully prevent upstream movement by nonnative Brook Trout, and thus barrier modification would be needed to establish an isolated Greenback Cutthroat Trout population in the proposed wilderness area.

Colorado↗
USGS2021

Coalescent methods reconstruct contributions of natural colonization and stocking to origins of Michigan inland Cisco (Coregonus artedi)

Fish population structure in previously glaciated regions is often influenced by natural colonization processes and human-mediated dispersal, including fish stocking. Endemic populations are of conservation interest because they may contain rare and unique genetic variation. While coregonines are native to certain Michigan inland lakes, some were stocked with fish from Great Lakes sources, calling into question the origin of extant populations. While most stocking targeted lake whitefish ( Coregonus clupeaformis ), cisco ( C. artedi ) were also stocked from the Great Lakes to inland waterbodies. We used population genetic data (microsatellite genotypes and mitochondrial (mt)DNA sequences), coalescent modeling, and approximate Bayesian computation to investigate the origins of 12 inland Michigan cisco populations. The spatial distribution of mtDNA haplotypes suggests Michigan is an introgression zone for two ancestral cisco lineages associated with separate glacial refugia. Low levels of genetic diversity and high levels of genetic divergence were observed for populations located well inland of the Great Lakes relative to populations occupying waterbodies near the Great Lakes. Estimates of recent Great Lakes gene flow ranged from 27 to 48% for populations near the Great Lakes shoreline but were substantially lower (under 8%) for populations further inland. Inland lakes with elevated recent gene flow estimates may have been recipients of stocked coregonine fry, including cisco. Low levels of genetic diversity paired with a high likelihood of endemism as indicated by strong genetic divergence and low Great Lakes population inputs suggest the analyzed cisco populations occupying southern Michigan kettle lakes are of elevated conservation interest.

Michigan↗
USGS2003

Conservation assessment of current and proposed nature reserves of Tamaulipas State, Mexico

The Mexican state of Tamaulipas located in the northeastern portion of the country currently has five state nature reserves covering slightly less than 3% of its land area. These reserves were established for a variety of reasons, many unrelated to the protection of biological resources. In 2000 in response to a growing concern about the lack of organized conservation reserve planning to protect the important biological and physical features of Mexico, the Mexican Commission for Knowledge and Use of Biodiversity (CONABIO) proposed 13 new terrestrial reserves for Tamaulipas. If established these new reserves would increase the proportion of terrestrial protected lands in the state to over 21%. We compiled a geographic information system (GIS) using existing digital thematic maps of physical and biological features to examine how the existing and proposed reserves might serve to protect the biodiversity and physical features of the state. We found that most of the existing protected sites occur in areas with elevations > 1000-2000 m with temperate climate and dominated by pine forest, oak forest, and cloud forest vegetation cover types. The state's dominant biotic region - low elevation coastal plain with tropical and arid climate types and xeric scrub vegetation - is disproportionately underrepresented in the current reserve system. The creation of the proposed areas would substantially increase the protection of mid and high elevation lands. The largest gap in the protected lands network would be low elevation, level, coastal lands.

Tamaulipas↗
USGS2010

Land use and small mammal predation effects on shortgrass prairie birds

Grassland birds endemic to the central shortgrass prairie ecoregion of the United States have experienced steep and widespread declines over the last 3 decades, and factors influencing reproductive success have been implicated. Nest predation is the major cause of nest failure in passerines, and nesting success for some shortgrass prairie birds is exceptionally low. The 3 primary land uses in the central shortgrass prairie ecoregion are native shortgrass prairie rangeland (62), irrigated and nonirrigated cropland (29), and Conservation Reserve Program (CRP, 8). Because shortgrasscropland edges and CRP may alter the community of small mammal predators of grassland bird nests, I sampled multiple sites on and near the Pawnee National Grasslands in northeast Colorado, USA, to evaluate 1) whether small mammal species richness and densities were greater in CRP fields and shortgrass prairiecropland edges compared to shortgrass prairie habitats, and 2) whether daily survival probabilities of ground-nesting grassland bird nests were negatively correlated with densities of small mammals. Small mammal species richness and densities, estimated using trapping webs, were generally greater along edges and on CRP sites compared to shortgrass sites. Vegetation did not differ among edges and shortgrass sites but did differ among CRP and shortgrass sites. Daily survival probabilities of artificial nests at edge and CRP sites and natural nests at edge sites did not differ from shortgrass sites, and for natural nests small mammal densities did not affect nest survival. However, estimated daily survival probability of artificial nests was inversely proportional to thirteen-lined ground squirrel (Spermophilus tridecemlineatus) densities. In conclusion, these data suggest that although land-use patterns on the shortgrass prairie area in my study have substantial effects on the small mammal community, insufficient data existed to determine whether land-use patterns or small mammal density were affecting grassland bird nest survival. These findings will be useful to managers for predicting the effects of land-use changes in the shortgrass prairie on small mammal communities and avian nest success. ?? 2010 The Wildlife Society.

Journal of Wildlife Management↗
USGS2021

Conservation genomics of the threatened western spadefoot, Spea hammondii, in urbanized southern California

Populations of the western spadefoot ( Spea hammondii ) in southern California occur in one of the most urbanized and fragmented landscapes on the planet and have lost up to 80% of their native habitat. Orange County is one of the last strongholds for this pond-breeding amphibian in the region, and ongoing restoration efforts targeting S. hammondii have involved habitat protection and the construction of artificial breeding ponds. These efforts have successfully increased breeding activity, but genetic characterization of the populations, including estimates of effective population size and admixture between the gene pools of constructed artificial and natural ponds, has never been undertaken. Using thousands of genome-wide single-nucleotide polymorphisms, we characterized the population structure, genetic diversity, and genetic connectivity of spadefoots in Orange County to guide ongoing and future management efforts. We identified at least two, and possibly three major genetic clusters, with additional substructure within clusters indicating that individual ponds are often genetically distinct. Estimates of landscape resistance suggest that ponds on either side of the Los Angeles Basin were likely interconnected historically but intense urban development has rendered them essentially isolated, and the resulting risk of interruption to natural metapopulation dynamics appears to be high. Resistance surfaces show that the existing artificial ponds were well-placed and connected to natural populations by low-resistance corridors. Toad samples from all ponds (natural and artificial) returned extremely low estimates of effective population size, possibly due to a bottleneck caused by a recent multi-year drought. Management efforts should focus on maintaining gene flow among natural and artificial ponds by both assisted migration and construction of new ponds to bolster the existing pond network in the region.

California↗