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Coastal typology: An integrative "neutral" technique for coastal zone characterization and analysis

Typology, the 'study or systematic classification of types that have characteristics or traits in common', has become a commonly used term and technique in coastal zone studies over the past two decades. At least part of this is due to adoption by the first Land-Ocean Interactions in the Coastal Zone (LOICZ) project of a typological approach as a way to understand and organize the daunting diversity of natural and human systems comprising the world coastal zone, and to the concurrent development of tools and databases to support systematic applications. This paper reviews some of the history of the term 'typology' and the concepts and techniques that it subsumes, and discusses its adoption and adaptation in coastal studies. It also addresses the continued and increasing relevance of typology to the continuation of the LOICZ project and its objectives, and outlines the opportunities and challenges involved in realizing the potentials of the approach - both within LOICZ and for the scientific and coastal zone communities in general. ?? 2007 Elsevier Ltd. All rights reserved.

Estuarine, Coastal and Shelf Science

Enhancing quantitative approaches for assessing community resilience

Scholars from many different intellectual disciplines have attempted to measure, estimate, or quantify resilience. However, there is growing concern that lack of clarity on the operationalization of the concept will limit its application. In this paper, we discuss the theory, research development and quantitative approaches in ecological and community resilience. Upon noting the lack of methods that quantify the complexities of the linked human and natural aspects of community resilience, we identify several promising approaches within the ecological resilience tradition that may be useful in filling these gaps. Further, we discuss the challenges for consolidating these approaches into a more integrated perspective for managing social-ecological systems.

Journal of Environmental Management

Local environment and individuals’ beliefs: The dynamics shaping public support for sustainability policy in an agricultural landscape

Agricultural landscapes are the bleeding-edge in the advancement of sustainability and climate change adaptation. Our study focuses on how individual support for sustainability policy is shaped in coupled natural and human systems. We present an agent-based model in which a cultural decision-rule quantifies the probability that a stakeholder decides to support an easement policy for a region in the Central Great Plains, USA. Our model defines a cultural threshold used to assess how culturally meaningful the policy is for each stakeholder. The individual cultural threshold is estimated using the value-belief-norm framework and is modified by perceived changes in the environment. Results demonstrated that few stakeholders support the policy in the average cultural setting (8.9%). However, enough stakeholders would support the policy under a lower cultural threshold (40.7%). Our results indicate that sustainability policies do not need to be cheap if they are culturally meaningful.

Kansas

The Landsat Burned Area algorithm and products for the conterminous United States

Complete and accurate burned area map data are needed to document spatial and temporal patterns of fires, to quantify their drivers, and to assess the impacts on human and natural systems. In this study, we developed the Landsat Burned Area (BA) algorithm, an update from the Landsat Burned Area Essential Climate Variable (BAECV) algorithm. Here, we present the BA algorithm and products, changes relative to the BAECV algorithm and products, and updated validation metrics. We also present spatial and temporal patterns of burned area across the conterminous U.S., how burned area varies in relation to the number of operational Landsat sensors, and a comparison with other burned area datasets, including the BAECV, Monitoring Trends in Burn Severity (MTBS), GeoMAC, and Moderate Resolution Imaging Spectroradiometer (MODIS) MCD64A1.006 data. The BA algorithm identifies burned areas in analysis ready data (ARD) time-series of Landsat imagery from 1984 through 2018 using machine learning, thresholding, and image segmentation. Validation with reference data from high-resolution commercial satellite imagery resulted in omission and commission error rates averaging 19% and 41%, respectively. In comparison, validation with Landsat reference data had omission and commission error rates averaging 40% and 28%, respectively when burned areas in cultivated crops and pasture/hay land-cover types were excluded. Both validation tests documented lower commission error rates relative to the BAECV products. The amount of burned area detected varies not only in response to climate but also with the number of operational sensors and scenes collected. The combined amount of burned area detected by multiple sensors was larger than from any individual sensor, but there was no significant difference between individual sensors. Therefore, we used BA products from individual sensors to assess trends over time and all available sensors to compare with other existing BA products. From 1984 through 2018, annual burned area averaged 30,000 km2, ranged between 14,000 km2 in 1991 and 46,500 km2 in 2012, and increased over time at a rate of 356 km2/year. Compared to existing burned area products, the new Landsat BA products identified 29% more burned area than the BAECV products (1984–2015), 183% more than the MTBS/GeoMAC products (1984–2018), and 56% more than the MCD64A1.006 products (2003–2018). The products had similar patterns of year-to-year variability; the R2 values of linear regressions between annual burned area were >0.70 with the BAECV products and the MTBS/GeoMAC products, but somewhat lower for the MCD64A1.006 product (R2 = 0.66). The BA products are routinely produced as new Landsat data are collected and provide a unique data source to monitor and assess the spatial and temporal patterns and the impacts of fire.

Remote Sensing of Environment

Landsat 9: Empowering open science and applications through continuity

The history of Earth observation from space is well reflected through the Landsat program. With data collection beginning with Landsat-1 in 1972, the program has evolved technical capabilities while maintaining continuity of land observations. In so doing, Landsat has provided a critical reference for assessing long-term changes to Earth's land environment due to both natural and human forcing. Poised for launch in mid-2021, the joint NASA-USGS Landsat 9 mission will continue this important data record. In many respects Landsat 9 is a clone of Landsat-8. The Operational Land Imager-2 (OLI-2) is largely identical to Landsat 8 OLI, providing calibrated imagery covering the solar reflected wavelengths. The Thermal Infrared Sensor-2 (TIRS-2) improves upon Landsat 8 TIRS, addressing known issues including stray light incursion and a malfunction of the instrument scene select mirror. In addition, Landsat 9 adds redundancy to TIRS-2, thus upgrading the instrument to a 5-year design life commensurate with other elements of the mission. Initial performance testing of OLI-2 and TIRS-2 indicate that the instruments are of excellent quality and expected to match or improve on Landsat 8 data quality. Landsat-9 will maintain the current data acquisition rate of up to 740 scenes per day, with these scenes available from the Landsat archive at no cost to users. In this communication, we provide background and rationale for the Landsat 9 mission, describe the instrument payloads and ground system, and discuss data products available from the Landsat 9 mission through USGS.

Remote Sensing of Environment

Estuarine submerged aquatic vegetation habitat provides organic carbon storage across a shifting landscape

Submerged aquatic vegetation (SAV) thrives across the estuarine salinity gradient providing valuable ecosystem services. Within the saline portion of estuaries, seagrass areas are frequently cited as hotspots for their role in capturing and retaining organic carbon (C org ). Non-seagrass SAV, located in the fresh to brackish estuarine areas, may also retain significant soil C org , yet their role remains unquantified. Given rapidly occurring landscape and salinity changes due to human and natural disturbances, landscape level carbon pool estimates from estuarine SAV habitat blue carbon estimates are needed. We assessed C org stocks in SAV habitat soils from estuarine freshwater to saline habitats (interior deltaic) to saline barrier islands (Chandeleur Island) within the Mississippi River Delta Plain (MRDP), Louisiana, USA. SAV habitats contain C org stocks equivalent to those reported for other estuarine vegetation types (seagrass, salt marsh, mangrove). Interior deltaic SAV C org stocks (231.6 ± 19.5 Mg C org ha −1 ) were similar across the salinity gradient, and significantly higher than at barrier island sites (56.6 ± 10.4 Mg C org ha −1 ). Within the MRDP, shallow water SAV habitat covers up to an estimated 28,000 ha, indicating that soil C org storage is potentially 6.4 ± 0.1 Tg representing an unaccounted C org pool. Extrapolated across Louisiana, and the Gulf of Mexico, this represents a major unaccounted pool of soil C org . As marshes continue to erode, the ability of coastal SAV habitat to offset some of the lost carbon sequestration may be valuable. Our estimates of C org sequestration rates indicated that conversion of eroding marsh to potential SAV habitat may help to offset the reduction of C org sequestration rates. Across Louisiana, we estimated SAV to offset this loss by as much as 79,000 Mg C yr −1 between the 1960s and 2000s.

Louisiana

Measurement of fecal glucocorticoids in parrotfishes to assess stress

Coral reefs are in decline worldwide from a combination of natural and human forces. The environmental compromises faced by coral reef habitats and their associated fishes are potentially stressful, and in this study we examined the potential for assessing stress levels in coral reef fish. We determined the feasibility of using fecal casts from parrotfishes for remote assessment of stress-related hormones (cortisol and corticosterone), and the response of these hormones to the stress of restraint and hypoxia. Measurement of these hormones in fecal extracts by high performance liquid chromatography (HPLC) was validated using mass spectrometry, chemical derivitization, and radioactive tracer methods. In aquarium-adapted parrotfish, baseline levels of cortisol and corticosterone averaged 3.4??1.1 and 14.8??2.8ng/g feces, respectively, across 32 days. During 13 days of periodic stress these hormones, respectively, average 10.8-fold and 3.2-fold greater than baseline, with a return to near baseline during a 23-day follow-up. Testosterone was also measured as a reference hormone which is not part of the stress-response axis. Levels of this hormone were similar across the study. These fecal hormones were also measured in a field study of parrotfish in 10 fringing coral reef areas around the Caribbean Island of St. John, US Virgin Islands. Extracts of remotely collected fecal casts of three parrotfish species revealed no difference in respective average hormone levels among these species. Also, there was no difference in respective hormone levels between aquarium and field environments. However, levels of both cortisol and corticosterone, but not testosterone, were elevated in two of the 10 reef sites surveyed. This study demonstrates that parrotfish fecals can be collected in aquarium and field conditions and that steroid hormones in these fecals can be extracted and reliably measured. The study also demonstrates that cortisol and corticosterone in parrotfish fecals can be used as an indicator of the stress-response which is unlikely to be masked by intrinsic variability in the sample source, environment or methodology. ?? 2003 Elsevier Science (USA). All rights reserved.

General and Comparative Endocrinology

Degradation of marine ecosystems and decline of fishery resources in marine protected areas in the US Virgin Islands

The large number of marine protected areas (MPAs) in the Caribbean (over 100) gives a misleading impression of the amount of protection the reefs and other marine resources in this region are receiving. This review synthesizes information on marine resources in two of the first MPAs established in the USA, namely Virgin Islands National Park (1962) and Buck Island Reef National Monument (1961), and provides compelling evidence that greater protection is needed, based on data from some of the longest running research projects on coral reefs, reef fish assemblages, and seagrass beds for the Caribbean. Most of the stresses affecting marine resources throughout the Caribbean (e.g. damage from boats, hurricanes and coral diseases) are also causing deterioration in these MPAs. Living coral cover has decreased and macroalgal cover has increased. Seagrass densities have decreased because of storms and anchor damage. Intensive fishing in the US Virgin Islands has caused loss of spawning aggregations and decreases in mean fish size and abundance. Groupers and snappers are far less abundant and herbivorous fishes comprise a greater proportion of samples than in the 1960s. Effects of intensive fishing are evident even within MPA boundaries. Although only traditional fishing with traps of 'conventional design' is allowed, commercial trap fishing is occurring. Visual samples of fishes inside and outside Virgin Islands National 'Park showed no significant differences in number of species, biomass, or mean size of fishes. Similarly, the number of fishes per trap was statistically similar inside and outside park waters. These MPAs have not been effective because an unprecedented combination of natural and human factors is assaulting the resources, some of the greatest damage is from stresses outside the control of park managers (e.g. hurricanes), and enforcement of the few regulations has been limited. Fully functioning MPAs which prohibit fishing and other extractive uses (e.g. no-take marine reserves) could reverse some of the degradation, allowing replenishment of the fishery resources and recovery of benthic habitats.

Environmental Conservation

Incidence of the enterococcal surface protein ( esp ) gene in human and animal fecal sources

The occurrence of the enterococcal surface protein ( esp ) gene in the opportunistic pathogens Enterococcus faecalis and E. faecium is well-documented in clinical research. Recently, the esp gene has been proposed as a marker of human pollution in environmental waters; however, information on its relative incidence in various human and animal fecal sources is limited. We have determined the occurrence of the esp gene in enterococci from human ( n = 64) and animal ( n = 233) fecal samples by polymerase chain reaction using two primer sets: one presumably specific for E. faecium ( esp fm ) and the other for both E. faecalis and E. faecium ( esp fs/fm ). We believe that this research is the first to explore the use of esp fs/fm for the detection of human waste in natural environmental settings. The incidence in human sources was 93.1% esp fm and 100% esp fs/fm in raw sewage influent; 30% for both esp fm and esp fs/fm in septic waste; and 0% esp fm and 80% esp fs/fm in active pit toilets. The overall occurrence of the gene in animal feces was 7.7% ( esp fs/fm ) and 4.7% ( esp fm ); animal types with positive results included dogs (9/43, all esp fm ), gulls (10/34, esp fs/fm ; 2/34, esp fm ), mice (3/22, all esp fs/fm ), and songbirds (5/55, all esp fs/fm ). The esp gene was not detected in cat (0/34), deer (0/4), goose (0/18), or raccoon (0/23) feces. The inconsistent occurrence, especially in septic and pit toilet sewage, suggests a low statistical power of discrimination between animal and human sources, which means a large number of replicates should be collected. Both esp fm and esp fs/fm were common in raw sewage, but neither one efficiently differentiated between animal and other human sources.

Environmental Science & Technology

Leveraging risk communication science across US federal agencies

Many US federal agencies apply principles from risk communication science across a wide variety of hazards. In so doing, they identify key research and practice gaps that, if addressed, could help better serve the nation’s communities and greatly enhance practice, research, and policy development.

Nature Human Behavior

Emerging methods for the study of coastal ecosystem landscape structure and change

Coastal landscapes are heterogeneous, dynamic, and evolve over a range of time scales due to intertwined climatic, geologic, hydrologic, biologic, and meteorological processes, and are also heavily impacted by human development, commercial activities, and resource extraction. A diversity of complex coastal systems around the globe, spanning glaciated shorelines to tropical atolls, wetlands, and barrier islands are responding to multiple human and natural drivers. Interdisciplinary research based on remote-sensing observations linked to process studies and models is required to understand coastal ecosystem landscape structure and change. Moreover, new techniques for coastal mapping and monitoring are increasingly serving the needs of policy-makers and resource managers across local, regional, and national scales. Emerging remote-sensing methods associated with a diversity of instruments and platforms are a key enabling element of integrated coastal ecosystem studies. These investigations require both targeted and synoptic mapping, and involve the monitoring of formative processes such as hydrodynamics, sediment transport, erosion, accretion, flooding, habitat modification, land-cover change, and biogeochemical fluxes.

International Journal of Remote Sensing

Global land ice measurements from space (GLIMS): remote sensing and GIS investigations of the Earth's cryosphere

Concerns over greenhouse‐gas forcing and global temperatures have initiated research into understanding climate forcing and associated Earth‐system responses. A significant component is the Earth's cryosphere, as glacier‐related, feedback mechanisms govern atmospheric, hydrospheric and lithospheric response. Predicting the human and natural dimensions of climate‐induced environmental change requires global, regional and local information about ice‐mass distribution, volumes, and fluctuations. The Global Land‐Ice Measurements from Space (GLIMS) project is specifically designed to produce and augment baseline information to facilitate glacier‐change studies. This requires addressing numerous issues, including the generation of topographic information, anisotropic‐reflectance correction of satellite imagery, data fusion and spatial analysis, and GIS‐based modeling. Field and satellite investigations indicate that many small glaciers and glaciers in temperate regions are downwasting and retreating, although detailed mapping and assessment are still required to ascertain regional and global patterns of ice‐mass variations. Such remote sensing/GIS studies, coupled with field investigations, are vital for producing baseline information on glacier changes, and improving our understanding of the complex linkages between atmospheric, lithospheric, and glaciological processes.

Geocarto International

Regional patterns in U.S. wildfire activity: The critical role of ignition sources

As extreme wildfires increase globally, understanding their causes is critical for effective management. While climate and housing growth are commonly linked to rising fire activity, the role of specific ignition sources—particularly human-caused—remains understudied. Analyzing a 79-year dataset (1940–2019) from U.S. Forest Service regions across the continental United States, we found that different ignition sources in different regions have been a major driver of wildfire trends, accounting for 60%–80% of the interannual variation in fire frequency and approximately 20% in area burned across most U.S. regions. Lightning and campfires were the dominant sources in western regions, while arson drove fire activity east of the Mississippi River. Trends also varied significantly by region and over time, with housing growth explaining more in terms of fire frequency and climate primarily influencing area burned. Importantly, frequent fires often originated from different sources than those causing the largest areas burned. Prevention of human-caused ignitions, such as campfires and arson, could offer efficient and effective strategies to mitigate wildfire impacts on human and natural systems under changing climate and land-use conditions.

contiguous United States

6&6: A transdisciplinary approach to art-science collaboration

Despite an historical connection between the arts and sciences, in the past century, the two disciplines have been greatly siloed. However, there is a renewed interest in collaboration across the arts and sciences to support conservation practice by understanding and communicating complex environmental, social, and cultural challenges in novel ways. 6&6 was created as a transdisciplinary art–science initiative to promote a deeper appreciation of the Sonoran Desert. Six artists and six scientists were paired to create work that explored conservation issues in the Sonoran Desert and the Gulf of California. In-depth interviews were conducted with the artists and scientists throughout the 4-year initiative to understand the impact of 6&6 on their personal and professional behaviors and outlook. The findings from this case study reveal the role that intensive, place-based, and transdisciplinary art–science programs can play in shaping narratives to better communicate the patterns and processes of nature and human–environment interactions.

Arizona, Baja California, Baja California Sur, Cal

Genomic data characterize reproductive ecology patterns in Michigan invasive Red Swamp Crayfish (Procambarus clarkii)

The establishment and spread of invasive species are directly related to intersexual interactions as dispersal and reproductive success are related to distribution, effective population size, and population growth. Accordingly, populations established by r-selected species are particularly difficult to suppress or eradicate. One such species, the red swamp crayfish ( Procambarus clarkii ) is established globally at considerable ecological and financial costs to natural and human communities. Here, we develop a single nucleotide polymorphism (SNP) loci panel for P. clarkii using restriction-associated DNA-sequencing data. We use the SNP panel to successfully genotype 1800 individuals at 930 SNPs in southeastern Michigan, USA. Genotypic data were used to reconstruct pedigrees, which enabled the characterization of P. clarkii's mating system and statistical tests for associations among environmental, demographic, and phenotypic predictors and adult reproductive success estimates. We identified juvenile cohorts using genotype-based pedigrees, body size, and sampling timing, which elucidated the breeding phenology of multiple introduced populations. We report a high prevalence of multiple paternity in each surveyed waterbody, indicating polyandry in this species. We highlight the use of newly developed rapid genomic assessment tools for monitoring population reproductive responses, effective population sizes, and dispersal during ongoing control efforts.

Evolutionary Applications

Risk analysis for biological hazards: What we need to know about invasive species

Risk analysis for biological invasions is similar to other types of natural and human hazards. For example, risk analysis for chemical spills requires the evaluation of basic information on where a spill occurs; exposure level and toxicity of the chemical agent; knowledge of the physical processes involved in its rate and direction of spread; and potential impacts to the environment, economy, and human health relative to containment costs. Unlike typical chemical spills, biological invasions can have long lag times from introduction and establishment to successful invasion, they reproduce, and they can spread rapidly by physical and biological processes. We use a risk analysis framework to suggest a general strategy for risk analysis for invasive species and invaded habitats. It requires: (1) problem formation (scoping the problem, defining assessment endpoints); (2) analysis (information on species traits, matching species traits to suitable habitats, estimating exposure, surveys of current distribution and abundance); (3) risk characterization (understanding of data completeness, estimates of the “potential” distribution and abundance; estimates of the potential rate of spread; and probable risks, impacts, and costs); and (4) risk management (containment potential, costs, and opportunity costs; legal mandates and social considerations and information science and technology needs).

Risk Analysis

The North American Freshwater Migratory Fish Database (NAFMFD): Characterizing the migratory life histories of freshwater fishes of Canada, the United States and Mexico

Aim Migratory freshwater fishes are those that must access discrete habitats to complete their life cycles. Freshwater fish migrations occur around the world and provide numerous ecosystem services for humans and natural systems; however, many migratory species are in decline globally. A limiting factor to successfully conserve freshwater migratory fishes is that the migratory life histories of many species are unknown or only partially described. To provide researchers with critical and comprehensive information to conserve migratory fishes, we developed the North American Freshwater Migratory Fish Database (NAFMFD). Location Canada, Mexico and the United States. Taxon Freshwater fish. Methods To develop this database, we assigned migratory status, pattern and behaviour to a comprehensive list of freshwater fish species found throughout North America. We assembled the database which included assignments (i.e. migratory status, pattern and behaviour) as well as the sources used to make the assignments. Researchers and managers from across North America reviewed the database for completeness and accuracy on the migratory life histories of fishes. Results The database synthesizes current knowledge of migratory status, pattern and behaviour of native and non-native freshwater fishes throughout North America, including 1250 species representing 79 families and 325 genera. Results showcase the diversity of migratory life histories of freshwater fishes on the continent, including that at least 25% of North American freshwater fishes are migratory, 23% are non-migratory and 44% have undetermined migratory status. Main conclusions NAFMFD improves the quality of migratory data accessible to researchers, which supports a more holistic understanding of the threats encountered by migratory fishes, including habitat fragmentation. The approach we used in developing NAFMFD can provide guidance for developing similar databases in other regions. Collectively, our work offers new insights into the range of freshwater fish migratory life histories, stimulating a need to better understand this diversity globally.

Journal of Biogeography

An integrated Riverine Environmental Flow Decision Support System (REFDSS) to evaluate the ecological effects of alternative flow scenarios on river ecosystems

In regulated rivers, managers must evaluate competing flow release scenarios that attempt to balance both human and natural needs. Meeting these natural flow needs is complex due to the myriad of interacting physical and hydrological factors that affect ecosystems. Tools that synthesize the voluminous scientific data and models on these factors will facilitate management of these systems. Here, we present the Riverine Environmental Flow Decision Support System (REFDSS), a tool that enables evaluation of competing flow scenarios and other variables on instream habitat. We developed a REFDSS for the Upper Delaware River, USA, a system that is regulated by three headwater reservoirs. This version of the REFDSS has the ability to integrate any set of spatially explicit data and synthesizes modeled discharge for three competing management scenarios, flow-specific 2-D hydrodynamic modeled estimates of local hydrologic conditions (e.g., depth, velocity, shear stress, etc.) at a fine pixel-scale (1 m 2 ), and habitat suitability criteria (HSC) for a variety of taxa. It contains all individual model outputs, computationally integrates these data, and outputs the amount of potentially available habitat for a suite of species of interest under each flow release scenario. Users have the flexibility to change the time period of interest and vary the HSC. The REFDSS was developed to enable side-by-side evaluation of different flow management scenarios and their effects on potential habitat availability, allowing managers to make informed decisions on the best flow scenarios. An exercise comparing two alternative flow scenarios to a baseline scenario for several key species is presented. The Upper Delaware REFDSS was robust to minor changes in HSC (± 10 %). The general REFDSS platform was developed as a user-friendly Windows desktop application that was designed to include other potential parameters of interest (e.g., temperature) and for transferability to other riverine systems.

New Jersey, Pennsylvania