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Nonstationary demographic state-space models using unreplicated counts for species undergoing environmental stressors

A fundamental task in ecological statistics is to estimate abundance and growth rate distributions from wildlife monitoring data to inform conservation management. Modeling time series of wildlife populations presents a number of challenges from both statistical and ecological perspectives, including discreteness; lack of replication; nonstationarity; and observation, demographic, and other phenomenological processes. Nonstationary dynamics are often exhibited by populations undergoing environmental stressors. Models must account for these characteristics to produce reliable estimates of abundance and trends, yet estimation can be challenging with unreplicated data. We propose nonstationary demographic state-space models using unreplicated counts for populations undergoing environmental stressors. A reduced growth rate model matches the complexity of the unreplicated count data, and a fecundity bound on growth rate distributions allows the separation of processes affecting growth rates like environmental stressors from those affecting abundance external to growth rates like migration. NDSSMs allow for the embedding of nonstationary model components, and we explore the use of changepoints, volatility clustering, and migration processes. We apply the proposed nonstationary models in case studies of herons affected by predator/competitor reestablishment and three bat species affected by a fungal pathogen causing white-nose syndrome. Nonstationary models outperform stationary models and generalized linear mixed effects models according to model scoring and visual inspection of predictions, and provide estimates more consistent with published values. Incorporating migration improves model fit universally, even with approximate one-way immigration, most likely because populations are extirpated, recolonized, and increase multiple-fold over the upper bound set by species fecundity. In addition, estimates of the timing and severity of the environmental stressor differed for models with migration. Including nonstationary and demographic components in a fecundity-bounded growth rate model improves inference and benefits interpretability of hyperparameters. In turn, this adjusts uncertainties in predictions of abundance and growth rates over time, providing the ingredients needed for informed conservation analysis and for directing future monitoring of at-risk species.

Journal of Agricultural, Biological and Environmen

Precipitation-based flood-inundation maps for the East Fork Little Blue River and tributaries at Lee’s Summit, Missouri, 2024

The U.S. Geological Survey, in cooperation with the City of Lee’s Summit, Missouri, assessed flooding of the East Fork Little Blue River and tributaries for varying precipitation magnitudes and durations, varying antecedent runoff conditions, and projected climate-change conditions. The precipitation scenarios were used to develop a library of flood-inundation maps for a 2.95-mile reach of the East Fork Little Blue River and tributaries within the city. A two-dimensional U.S. Army Corps of Engineers Hydrologic Engineering Center–River Analysis System (HEC–RAS; ver. 6.5) rain-on-grid model was calibrated to selected runoff events representing a range of antecedent runoff conditions and hydrologic responses. Lowest adjacent grades for structures within the nearby study area were incorporated into the terrain, and depth grids and water-surface elevation grids were developed for the study area. Simulated velocities at selected bridge locations were also developed from the model. The model was calibrated using water-surface elevation data collected from water-level loggers (pressure transducers) and streamflow measurements and water-surface elevation measurements made at a reference point during runoff events. The calibrated HEC–RAS model was used to simulate streamflows from design rainfall events of 15-minute to 24-hour durations and ranging from a 100- to 0.1-percent annual exceedance probability (1-year to 1,000-year recurrence intervals). Flood-inundation maps were produced for depths at a reference location of 3 to 16 feet, or a depth exceeding the 0.1-percent annual exceedance probability interval precipitation. The results of each precipitation duration-frequency value were represented by a 1-foot-increment inundation map based on the generated peak streamflow from that rainfall event and the corresponding water-surface elevation at the East Fork Little Blue River reference location. Within the HEC–RAS model, 240 scenarios were developed from the design rainfall events with each of 3 antecedent conditions. Additional scenarios were created to simulate the effects of projected precipitation scenarios on the 100-year recurrence interval, 24-hour storm and the 100-year recurrence interval, 6-hour storm. All simulation results were assigned to a flood-inundation map condition based on the generated peak flow and corresponding water-surface elevation at the East Fork Little Blue River reference location. The flood-inundation maps are shown on a web mapping application made available to the public through the City of Lee’s Summit (hyperlink will be added when available). The flood-inundation maps are tied to real-time precipitation data obtained from the Automated Surface Observing System weather station at the Lee’s Summit Municipal Airport, accessible at https://mesonet.agron.iastate.edu/request/download.phtml?network=MO_ASOS . The availability of these maps, along with information regarding observed rainfall, could help provide emergency management personnel and residents with information that is critical for flood-response activities, such as evacuations and road closures, and for postflood recovery efforts.

Missouri

U.S. Geological Survey research and assessments supporting carbon dioxide removal

Both carbon capture and storage (CCS) and carbon dioxide removal (CDR) are methods to limit future global temperature rise and ocean acidification. CCS sequesters (stores) carbon dioxide (CO2) captured from industrial sources thereby preventing the CO2 from reaching the atmosphere. The captured CO2 is injected into underground geologic reservoirs or is converted into stable industrial products. CDR enhances natural processes or uses technical approaches to remove excess CO2 from the atmosphere. Carbon dioxide is sequestered in natural sinks such as vegetation and soil, or injected into underground reservoirs or converted into durable products. The U.S. Geological Survey (USGS) conducts research and resource assessments that support biologic and geologic CDR approaches. This report will review some of the ongoing USGS CDR research and assessment efforts.

Conference Paper

Ungulate migrations of the Western United States, volume 5

Many ungulates migrate between distinct summer and winter ranges to take advantage of spatially and temporally variable food sources and avoid threats such as predators and deep snow. In 2018, the U.S. Department of the Interior established Secretarial Order 3362, which provided Federal support to expand existing research efforts to study ungulate populations and conserve their migrations by enhancing habitat quality for ungulates across the Western United States. In response to the order, the U.S. Geological Survey (USGS) created the Corridor Mapping Team, which is a collaboration among 11 State agencies, regional and Federal partners, and an expanding number of Tribal wildlife agencies. Together, the Corridor Mapping Team maps ungulate migrations throughout the Western United States and publishes them in the USGS “Ungulate Migrations of the Western United States” report series. This report details migrations and seasonal ranges from 36 additional herds and includes 2 herd updates detailed in previous reports. The Corridor Mapping Team has mapped the migrations and seasonal ranges of 218 unique herds for the report series, including this report. The report series serves as a map-based inventory of the ungulate migrations across the Western United States for biologists, managers, policymakers, and conservation practitioners. Building on the previous report volumes in the series, volume 5 additionally describes some of the local and national initiatives that are incorporating the products, tools, and information from this growing USGS report series.

Navajo Nation

Salinas Valley integrated hydrologic and reservoir operations models, Monterey and San Luis Obispo Counties, California

The area surrounding the Salinas Valley groundwater basin in Monterey and San Luis Obispo Counties of California is a highly productive agricultural area, contributes significantly to the local economy, and provides a substantial portion of vegetables and other agricultural commodities to the Nation. This region of California provides about half of the Nation’s lettuce, celery, broccoli, and spinach each year. Thus, this agricultural area provides significant volumes of agricultural products not just for California but the entire United States. Changes in population and increased agricultural development, which includes a shift toward more water-intensive crops, and climate variability, have put increasing demand on both surface water and groundwater resources in the valley. This has resulted in water management challenges in the Salinas Valley that are predominantly related to distribution of water supply throughout the basin. Where and when the water is present in the surface and subsurface does not coincide with where and when the water is needed. To deal with the distribution issue, historically water has been used conjunctively in the valley. Conjunctive use is a water management strategy that coordinates surface water and groundwater use to maximize water availability. Groundwater is used throughout the Salinas Valley to meet water demands when surface water supplies are insufficient. Availability of surface water is constrained by climate. Precipitation and streamflow vary seasonally and year to year. Although there are two reservoirs in the Salinas Valley to capture and store water during wet periods, the only conveyance of reservoir water to coastal agricultural areas is the Salinas River. Increasing demand on groundwater and surface water resources throughout the Salinas Valley has resulted in undesirable effects of unsustainable water use, such as surface water depletion, groundwater level declines, storage depletion in the principal aquifers, and seawater intrusion. To address these escalating issues, local communities, water management agencies, and groundwater sustainability agencies are evaluating how to sustainably manage both their surface water and groundwater resources. To meet water demands and reduce undesirable effects of unsustainable water use, continued conjunctive management of surface water and groundwater would ideally incorporate strategies to deal with increases in demand and a variable climate. To evaluate the challenging water management issues in the Salinas Valley, the U.S. Geological Survey, Monterey County Water Resource Agency, and the Salinas Valley Basin Groundwater Sustainability Agency developed a comprehensive suite of models that represent the Salinas Valley Hydrogeologic system called the Salinas Valley System Model. The Salinas Valley Geologic Framework was developed to characterize the subsurface using various topographic and geologic data sources, including information on hydrogeologic units, their surfaces and extents, geologic structures, lithology, and elevations from borehole data and cross sections, as well as details on faults and existing models. The Salinas Valley Watershed Model simulates the entire Salinas River watershed. Monthly surface water inflows into the integrated hydrologic model domain were simulated using the Salinas Valley Watershed Model. The historical model uses historical climate data, water and land use data, and reservoir releases to simulate agricultural operations, including landscape water demands, diversions, and reclaimed wastewater. The operational model adds an embedded reservoir operations framework to the simulation of the historical model that allows specified operational rules to simulate reservoir releases and changes in reservoir storage. The operational model assumes current reservoir operations and constant land use, which differs from historical conditions. Thus, the operational model is a hypothetical baseline model that can be used by local water managers to evaluate and quantify potential benefits of water supply projects. Together, the geologic framework, watershed, historical, and operational models form a tool that can be used to simulate irrigated agriculture and associated reservoir operations of the integrated hydrologic system of the Salinas Valley.

EarthArXiv

Methods and guidelines for effective model calibration; with application to UCODE, a computer code for universal inverse modeling, and MODFLOWP, a computer code for inverse modeling with MODFLOW

This report documents methods and guidelines for model calibration using inverse modeling. The inverse modeling and statistical methods discussed are broadly applicable, but are presented as implemented in the computer programs UCODE, a universal inverse code that can be used with any application model, and MODFLOWP, an inverse code limited to one application model. UCODE and MODFLOWP perform inverse modeling, posed as a parameter-estimation problem, by calculating parameter values that minimize a weighted least-squares objective function using nonlinear regression. Minimization is accomplished using a modified Gauss-Newton method, and prior, or direct, information on estimated parameters can be included in the regression. Inverse modeling in many fields is plagued by problems of instability and nonuniqueness, and obtaining useful results depends on (1) defining a tractable inverse problem using simplifications appropriate to the system under investigation and (2) wise use of statistics generated using calculated sensitivities and the match between observed and simulated values, and associated graphical analyses. Fourteen guidelines presented in this work suggest ways of constructing and calibrating models of complex systems such that the resulting model is as accurate and useful as possible.

Water-Resources Investigations Report

Plan to coordinate post-earthquake investigations supported by the National Earthquake Hazards Reduction Program (NEHRP)

Introduction This report presents a plan supported by the National Earthquake Hazards Reduction Program (NEHRP) to coordinate domestic and international post-earthquake investigations (herein called “the Plan”). Post-earthquake scientific and engineering investigations are undertaken to capture critical information to understand the causes and impacts of the event, lessons from which can substantially improve the Nation’s resilience after future earthquakes. NEHRP is the Federal Government’s coordinated nationwide program to reduce risks to life and property from earthquakes. The Plan describes the activation and coordination of the four designated NEHRP Agencies in the Federal Government: Federal Emergency Management Agency, National Institute of Standards and Technology, U.S. National Science Foundation, and U.S. Geological Survey (USGS). The Plan also describes coordination between NEHRP Agencies and other organizations that may participate in pre-event and post-earthquake investigations, including non-NEHRP Federal agencies; State, regional, local, Tribal, and territorial agencies; domestic nongovernmental organizations; academic institutions and affiliated organizations; private companies; foreign governmental agencies and nongovernmental organizations; and international organizations. The Plan delineates the coordination of NEHRP post-earthquake scientific and engineering investigations to document the direct, indirect, and cascading physical and societal impacts from fault rupture and ground shaking hazards and from secondary hazards such as landslides, liquefaction, and tsunamis. In addition, the Plan identifies pre-event activities necessary to ensure that post-earthquake investigations are executed effectively. The USGS is the lead NEHRP Agency for activating and coordinating NEHRP post-earthquake investigations and for implementing this Plan. The USGS also leads coordination of the NEHRP Agencies in completing the pre-event activities identified in the Plan. The Plan has new information and supersedes USGS Circular 1242, “The Plan to Coordinate NEHRP Post-Earthquake Investigations,” which was published in 2003. This second-generation Plan was developed with the assistance of the Applied Technology Council (ATC) of Redwood City, California, under USGS contract 140G0121P0309, ATC-155. A 17-member Project Review Panel provided guidance on plan development, and input was solicited from subject matter experts representing key stakeholder groups and from participants at a public workshop.

Circular

Neutron scattering reveals fractionation of natural gas mixtures in unconventional petroleum reservoir pores: Perspectives on energy resource recovery and storage

In unconventional petroleum reservoirs hydrocarbon fluids are hosted by both mineral and organic matter pores. These pores can have diameters that range from microns to less than a single nanometer and, for unconventional reservoirs, there is evidence that small pores ( <20 nm diameter) may constitute a large proportion of the available space. Understanding subsurface volumes and how fluids behave in them can be helpful for predicting hydrocarbon production and storage in the subsurface. One area with knowledge gaps regarding hydrocarbon behavior in small pores is the possibility for mixtures to fractionate (i.e., unmix) based on pore size or pore type. Mixture fractionation as a function of pore size could impact recovery of hydrocarbons, drive compositional shifts during production, and limit fluid storage within candidate reservoirs. To investigate natural gas fractionation in small geologic pores, we applied total neutron scattering to probe methane-ethane mixtures at reservoir pressures (up to ≈30 MPa) and temperature (60°C) within a sample from the Upper Cretaceous Niobrara Formation. Neutron scattering data reveal only minor fractionation occurs between methane and ethane in 20-nm diameter sample mesopores. Increased fractionation is observed for sample micropores, with up to 72% (±1% at 1-sigma) methane found in 2 nm diameter pores following injection of a 50%-50% methane-ethane mixture. These data provide rarely available direct experimental observations of hydrocarbon mixture behavior under nanoconfinement in a sample from an important unconventional petroleum reservoir. Our results are discussed in the context of evaluating hydrocarbon resources in unconventional reservoir meso- and micropores, reconciling observed gas composition changes during production, and more broadly, understanding subsurface pore volumes within an energy storage framework.

Fuel

Top Elevation of Glacial Till and Thickness of the Big Sioux Aquifer Delineated From Electrical Resistivity Tomography Surveys Near Sioux Falls, South Dakota, 2022 and 2025

The City of Sioux Falls, South Dakota, requested the U.S. Geological Survey perform electrical resistivity surveys on three parcels of land north of the city. Electrical resistivity data were collected along a total of 22 transects during March 14–18, 2022, and November 17–21, 2025. Results from electrical resistivity surveys were used to delineate the top of glacial till deposits for the purpose of characterizing the Big Sioux aquifer near the city. Delineating geologic contacts provides important information on groundwater storage, flow dynamics, well design and placement, contaminant transport, groundwater–surface-water interactions, and regional water modeling. The top elevation of glacial till and the thickness of the Big Sioux aquifer varied among the three survey areas. The interpreted top elevation of glacial till in the North survey area decreases from east to west toward a slough, with elevations ranging from 1,403 to 1,418 feet (ft). The estimated thickness of the Big Sioux aquifer in the North survey area increased from east to west, with thicknesses ranging from 23 to 38 ft. The top elevation of glacial till in the Well 72 survey area generally decreases from northwest to southeast. Top elevations of the glacial till in the Well 72 survey area ranged from 1,400 to 1,409 ft along the southern end of transect W72_2. The estimated thickness of the Big Sioux aquifer in the Well 72 survey area was greatest along a southeast to northwest trending channel, with thicknesses ranging from 28 to 40 ft. The top elevation of glacial till in the Nose survey area generally decreases west toward the Big Sioux River. Top elevations of the glacial till in the Nose survey area ranged from 1,362 to 1,395 ft. The estimated thickness of the Big Sioux aquifer in the Nose survey area ranged from 33 to 70 ft.

South Dakota

Analysis of nutrients in the surface waters of the Georgia–Florida Coastal Plain study unit, 1970–91

During the early phase of the Georgia-Florida National Water Quality Assessment study, existing information on nutrients was compiled and analyzed in order to evaluate the nutrient concentrations within the 61,545 square mile study unit. Evaluation of the nutrient concentrations collected at surface-water sites between October 1, 1970, and September 30, 1991, utilized the environmental characteristics of land resource provinces, land use, and nonpoint and point-source discharges within the study unit. Long-term trends were investigated to determine the temporal distribution of nutrient concentrations. In order to determine a level of concern for nutrient concentrations, the U.S. Environmental Protection Agency (USEPA) guidelines were used: (1) for nitrate concentrations, the maximum contaminant level in public-drinking water supplies (10 mg/L); (2) for ammonia concentrations, the chronic exposure of aquatic organisms to un-ionized ammonia (2.1 mg/L); (3) for total-phosphorus concentrations, the recommended concentration in flowing water to discourage excessive growth of aquatic plants (0.1 mg/L); and (4) for kjeldahl concentrations, however, no guidelines were available. For sites within the 10 major river basins, median nutrient concentrations were enerally below USEPA guidelines, except for total-phosphorus concentrations where 45 percent of the medians exceeded the guideline. The only median ammonia concentration that exceeded the guideline occurred at the Swift Creek site (3.4 mg/L), in the Suwannee River basin, perhaps due to wastewater discharges. For all sites within the Withlacoochee, Aucilla, and St. Marys River basins, median concentrations of nitrate, ammonia, and total phosphorus were below the USEPA guidelines. Nutrient data at each monitoring site within each major basin were aggregated for comparisons of median nutrient concentrations among major basins. The Ochlockonee and Hillsborough River basins had the highest median nutrient concentrations, the Aucilla River basin had the lowest. Median concentrations of nitrate and ammonia among all major basins were below USEPA guidelines. The median total-phosphorus concentrations for the following river basins exceeded the USEPA guideline: Hillsborough, St. Johns, Suwannee, Ochlockonee, Satilla, Altamaha, and Ogeechee. Although nutrient concentrations within the study unit were low, long-term increasing trends were found in all four nutrients. All 18 study-unit wide nitrate trends had increasing slopes ranging from less than 0.01 to 0.07 (mg/L)/yr. The range in slope for the 13 ammonia trends was -0.03 to 0.01 (mg/L)/yr with 6 increasing trends in the northern part of the study unit. Of the 17 total-phosphorus trends found in the study unit, 10 were found at sites where the median concentration exceeded the USEPA guideline. At these 10 sites, 4 sites had increasing trends with slopes ranging from less than 0.01 to 0.07 (mg/L)/yr, 5 sites had decreasing trends with slopes ranging from -0.01 to -0.24 (mg/L)/yr, and one site showed a seasonal concentration trend. Median nutrient concentrations were significantly different among the four land resource provinces: Southern Piedmont, Southern Coastal Plain, Coastal Flatwoods, and Central Florida Ridge. As a result, nutrient concentrations among basins with similar nutrient inputs but located within different land resource provinces are not expected to be the same due to differences in the combination of factors such as soil permeability, runoff rates, and stream channel slopes. This concept is an important consideration in designing a surface-water quality network within the study area. For the most part, the Coastal Flatwoods showed the lowest median nutrient concentrations and the Southern Coastal Plain had the highest median nutrient concentrations. Lower median nitrate concentrations in surface-water basins were associated with the forest/wetland land-use category and higher median concentrations of nitrate and ammonia with the urban category when land-use percentages were classified into four land-use categories (agriculture, forest/wetland, mixed, and urban). These results were reasonable based on expected high nutrient inputs from urban areas and low inputs from forested and wetland areas. However, the lack of association between high nutrient concentrations and the agricultural land-use category was not expected since high nutrient inputs are generally needed for agriculture production.

Florida, Georgia

Multi-scale geophysical mapping of the brine and bedrock surfaces along the Dolores River, Paradox Valley, Colorado, December 2023

Total dissolved solids derived from salt dome–sourced brine in the underlying alluvial aquifer substantially increase with distance in the reach of the Dolores River that passes through Paradox Valley in southwestern Colorado. The area has been the site of salinity control operations since the 1990s to reduce salt loading to the downstream Colorado River. Previous airborne and ground/water-based electromagnetic (EM) geophysical data have successfully mapped the top of the brine surface, albeit with relatively coarse near-surface resolution and limited spatial coverage. This present December 2023 study used ground-based high-resolution EM and passive seismic (horizontal-to-vertical spectral ratio, HVSR) tools to map in detail the depth and thickness of the brine zone in the alluvial aquifer (top of the brine down to bedrock contact) in areas immediately surrounding the Dolores River where previous airborne EM (AEM) results indicated brine within 10 m of land surface. Results indicate the deepest bedrock is generally associated with the shallowest brine and local depressions in the collapse breccia (caprock to the Paradox Formation salt) may facilitate vertical migration of brine into the alluvial aquifer. Additionally, the ground-based EM mapping corroborated general patterns in depth to brine that were observed in previous AEM results while also revealing additional detail, including suspected focused brine discharge zones to the Dolores River. A river-based survey wherein EM data, channel depth and river water–specific conductance information were collected augmented these findings and indicated specific areas on both the western and eastern sides of the river where focused brine discharge may occur. This study comprises a large-scale, ground- and water-based geophysical mapping effort, including hundreds of HVSR soundings and 100s of kilometres of EM data, which were successfully translated into digital brine and bedrock surfaces that could be incorporated into groundwater modelling efforts, future well siting or other decision-making.

Colorado

Evidence of nitrate attenuation in intertidal and subtidal groundwater in a subterranean estuary at a Cape Cod embayment, East Falmouth, Massachusetts, 2015–16

Nitrogen dynamics in intertidal and nearshore subtidal groundwater (subterranean estuary) adjacent to the Seacoast Shores peninsula, Falmouth, Massachusetts, were investigated during 2015–16 by the U.S. Geological Survey. The peninsula is a densely populated residential area with septic systems and cesspools that are substantial sources of nitrogen to groundwater. The study area is in the Eel River, an estuarine saltwater embayment connected to the ocean adjacent to the western shore of the peninsula, that was the subject of an earlier study by Colman and others (2018, https://doi.org/10.3133/sir20185095 ) on nitrogen transport and transformations in groundwater between onshore and offshore locations. The previous study documented the distribution of nitrate concentrations and nitrate attenuation reactions in fresh groundwater beneath the peninsula and the estuary. The current study extended those observations with more detailed sampling and analysis of shallow groundwater from wells near discharge sites beneath the estuary. The current field investigation included sampling of existing wells and installation and sampling of clusters of wells and temporary sampling points in the subterranean estuary, including (1) shallow transects 0.3 to 1.2 meters (m) deep extending from 1 to 13.5 m offshore and (2) deeper wells (from 1.83 to 4.88 m deep) extending from 4.3 to 14.3 m offshore. Measurements of hydraulic-head gradients 2–5 m below the sediment/water interface in the intertidal and nearshore subtidal zones indicated that groundwater flow generally was upwards (towards the estuary) under all tide conditions in October 2016. The magnitude of the gradient was greatest during low tide conditions, indicating that groundwater discharge likely decreased during high tides. Measurements of specific conductance in shallow groundwater in the subterranean estuary in three transects perpendicular to shore were consistent with the existence of saltwater flow cells (infiltration of overlying saline water, mixing with fresh groundwater, and discharge to the overlying saline water) in the intertidal and nearshore subtidal regions. The size of these flow cells was variable in space and time and dependent on the elevation of the tide (spring or neap). At this location in the Eel River subterranean estuary, and offshore to at least 13.5 m, offshore flow of fresh groundwater apparently prevented a deeper saltwater wedge from discharging to the surface. Nitrate concentrations in shallow groundwater (30 to 122 centimeters [cm] depth) were variable in space and time, ranging from not detectable to 600 micromoles per liter (μmol/L) (8.4 milligrams per liter as N), and were highest in June 2016 at depths from 61 to 122 cm below the sediment/water interface and from 4 to 9 m offshore. Nitrate generally was not detectable in saline shallow groundwater at 30-cm depth or at any depth from 30 to 122 cm from 10 to 13.5 m offshore. Dissolved oxygen concentrations were suboxic (less than 16 μmol/L) in 60 percent of the sampled subterranean groundwater beneath the intertidal and subtidal zones. In the remaining sites, the range of dissolved oxygen concentrations was from 18 to 272 μmol/L and the median concentration was 43 μmol/L. Evidence for microbial nitrate reduction (denitrification and possibly anammox) was provided by the distribution of the reaction product nitrogen gas (excess N 2 , or N 2MIC ), as determined from analysis of the dissolved nitrogen gas and argon gas (Ar) concentrations in groundwater samples. Excess nitrogen gas provided evidence for nitrate reduction in shallow groundwater below the subtidal and, to a lesser extent, intertidal zones adjacent to the Seacoast Shores peninsula. These zones, where evidence for nitrate reduction was detected, were in fresh and brackish groundwater near subtidal or intertidal saltwater cells where discharging fresh groundwater mixed with infiltrating saline water. Infiltrating seawater may have supplied organic carbon, one of several potential electron donors that are required for denitrification. Other potential electron donors, such as organic carbon, iron, manganese, hydrogen, methane, ammonium, elemental sulfur, or sulfide phases, may have been supplied by the estuarine sediments. Drainage from surface runoff near the shore also may have supplied organic carbon to fresh groundwater near the intertidal saltwater cell. The highest amounts of nitrate converted to excess nitrogen gas were estimated to be in the range of 230 to 430 μmol/L in nearly fresh groundwater near the subtidal saltwater cell at depths of 61 to 122 cm below the sediment/water interface and from 10 to 13.5 m offshore. Evidence of denitrification within 10 m of the shore was sparse (generally limited to less than 50 μmol/L of N 2 -N) despite the presence of high nitrate concentrations. The spatial distribution of estimated nitrate reduction in the intertidal and nearshore subtidal fresh and brackish groundwater may be related to local variability in the distribution of reactive electron donors in those zones. Variations in the amount of nitrate reduction to nitrogen gas were not clearly related to potential aqueous electron donors such as dissolved organic carbon, nor to potential reaction products such as alkalinity, but may have been controlled by combinations of aqueous and solid-phase reactants. The distribution of relatively shallow fresh groundwater containing nitrate could indicate potential nitrate discharge areas in the lower intertidal zone and uncertain locations farther offshore; however, the data did not extend all the way to the sediment/water interface or to the offshore freshwater limit. This study confirmed substantial loss of nitrate from some of the fresh and brackish groundwater in shallow subestuarine sediments prior to discharge but did not quantify how much nitrate eventually discharged to the estuary.

Massachusetts

Connecting flood-related fluvial erosion and deposition with vulnerable downstream road-stream crossings

Fluvial erosion is increasingly responsible for infrastructure and building damages associated with floods as the intensity of extreme rainfalls hit rural and urban rivers in a variety of climate settings across the United States. Extreme floods in 2016 and 2018 caused widespread culvert blockages and road failures, including extensive damage along steep tributaries and ravines in the Marengo River, Wisconsin, watershed during 2016 and 2018. A study conducted by the U.S. Geological Survey (USGS), Wisconsin Wetlands Association (WWA), Ashland County, and the Northwest Wisconsin Regional Planning Commission (NWRPC) investigated the special concern of fluvial erosion hazards (FEHs) associated with gullying, streamside landslides, and the loss of wetland storage in headwaters. In 2019, a pilot study was begun to map and classify ephemeral and perennial streams and wetlands in terms of their sensitivity to FEHs. This study combined data from field-based rapid geomorphic assessments (RGAs) coupled with a stream network-wide geographic information system (GIS) approach for mapping stream segments, referred to as fluvial process zones (FPZ), sensitive to erosion, deposition, and channel change. The GIS approach used nationally available 10-meter (m) resolution topology and an extended stream network to map FPZs based on Strahler stream order, stream power, channel slope, presence of adjacent steep valley sides and headwater flats, and adjacent landform setting. Bankfull channel widths derived from RGA-based hydraulic geometry curves combined with drainage areas, an estimate of bankfull flow, and channel slope were used to calculate specific stream power for the FPZs. Lastly, the FPZs were characterized by their location within three major landform settings that affect erosion potential. The resulting vulnerability maps provided a screening framework to identify FPZs that are sensitive to incision, gullying and mass wasting along steep headwater ephemeral channels, as well as downstream perennial channels that have the potential for valley-side landslides, coarse sediment deposition, and channel change. Lastly, each FPZ was characterized in terms of hydrologic alteration associated with ditching. The vulnerability mapping products and rankings of sensitivity of FPZs will ultimately be used by Ashland County and their collaborators to prioritize natural flood management projects that mitigate FEHs, restore hydrology, and reconnect channels with adjacent wetlands and floodplains.

Wisconsin

Simulation of groundwater flow in the Silurian aquifer, eastern Iowa, 2020–45

The Silurian aquifer is an important water source for municipalities, industry, and rural households and communities in eastern Iowa, including Johnson County. Increasing demand for groundwater from the aquifer indicated that analytical tools may be beneficial to quantify groundwater resources and inform water-management decisions for the aquifer. The U.S. Geological Survey, in cooperation with the Johnson County Board of Supervisors, developed conceptual and numerical groundwater models to simulate water levels in the Silurian aquifer, determine groundwater budgets, and forecast changes in groundwater levels through 2045. A MODFLOW numerical model was constructed to match water levels for 2020 through 2022. Model performance was assessed by comparing simulated and observed water-level hydrographs at several pumping and monitoring wells. Hydrograph comparison indicates that the model simulates water levels accurately at monitoring wells that are not near areas of pumping and generally overpredicts water levels near pumping wells, while accurately simulating the drawdown trend over time at pumping wells. This transient model framework was then used to predict water levels through 2045 in a scenario of moderate drought and increased groundwater withdrawals. Results from the predictive model indicate as much as 13 meters of additional drawdown in 2045 from 2020 water levels in the area of pumping wells.

Iowa

Regional characterization of coal resources in the U.S. Gulf Coast

There is increasing interest in extracting critical minerals (CM), including rare earth elements (REE), from coals in the United States to address the overreliance on imported REE. The U.S. Gulf Coast and the Williston basins are the two major lignite-bearing basins within the country. Recent REE and CM studies of the lignite in these basins have indicated that the coals may be a viable source material for REE and CM extraction. To evaluate in-place coal as a potential source of REE and CM, the coal resources need to be quantified. This study presents the results of a regional analysis of the U.S. Gulf Coast lignite and bituminous coal resources that might be available as potential sources of REE and CM. The resource analysis used kriging methods to develop isopleth maps of cumulative coal thickness throughout the region using data from 31,181 drill holes and other data points. The estimated total coal resource in the Gulf Coast is about 83 billion metric tons in the upper 90 m (~ 300 ft) of the subsurface. Texas accounted for 40 percent (32 billion metric tons) of the total resource, followed by Mississippi (24 %, 20 billion metric tons), Louisiana (14 %, 12 billion metric tons), Tennessee (10 %, 8.5 billion metric tons), and Arkansas (6 %, 5.1 billion metric tons). The remaining states each accounted for less than 5 percent of the total resource. Georgia had the smallest resource estimated at 7 million metric tons. Here we report the first known state-wide lignite resource estimates for Georgia, Kentucky (820 million metric tons), and Missouri (1,800 million metric tons). A comparison of the results of this study with those of previous Gulf Coast and Williston Basin resource studies is difficult because each study used different data sources, assessment methodologies, overburden depths, and qualifying coal thicknesses. Coal-power electric generation has sharply decreased in past decades and mining of these coals for CM and REE could provide additional co-products such as activated carbon and other uses such as fertilizer (soil enhancer).

EarthArXiv

Estimating the probability of export restrictions to inform mineral criticality

To assess risks associated with advanced technologies’ supply chain disruptions, governmental agencies and others have developed mineral “criticality” assessments, with criticality described using the economic impact and probability of supply chain disruptions. Previous work developed subjective supply risk indicators to approximate this probability, typically combining several factors such as supply diversity and trading partners’ political stability, where indicator weightings can substantially impact results. This work explicitly quantifies export barrier probability using an ensemble of machine learning classifiers, with probability estimates informed by exogenous variables, including prior barrier implementation and global export dominance. Major differences in high-probability countries and commodities are observed across models, but the ensemble method highlights Indonesia, China, Tanzania, and the United States as particularly high risk. The Supplementary Data File provides export barrier probability estimates for each analyzed country-commodity pair, enabling a direct, quantitative, objective contribution to assessing mineral criticality, enhancing risk identification and prioritization for policymakers.

Resources, Conservation, and Recycling

AAPG Energy and Minerals Division Tight Oil and Gas Committee Activities and Commodity Report for 2021-2022: Tuscaloosa Marine Shale, Gulf Coast basin, Louisiana and Mississippi

The Upper Cretaceous Tuscaloosa marine shale (TMS) potential production area encompasses 20.4 million acres across central Louisiana (LA), southern Mississippi (MS), southwestern Alabama (AL), and a small southwestern section of the Florida panhandle (Hackley et al., 2018). It remains a minor and largely undeveloped unconventional shale oil play with production from the TMS confined along the east-west LA-MS State boundary (Fig. 1). The mean undiscovered, technically recoverable resources in the TMS are estimated at 1.5 billion barrels of oil and 4.6 trillion cubic feet of gas (Hackley et al., 2018). Geochemical analyses of source rock solvent extracts and oil samples indicate that, in the play area, the TMS is the primary source of shale oil produced from the TMS as well as of accumulated oils in the underlying conventional reservoirs of the lower Tuscaloosa (Hackley et al., 2020). The API gravity of TMS oils ranges from approximately 34 to 46 degrees (Hackley et al., 2020; Croke et al., 2020).

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