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At least 181 records · Page 10Linked to original sources
USGS2008

Anti-tick biological control agents: assessment and future perspectives

Widespread and increasing resistance to most available acaracides threatens both global livestock industries and public health. This necessitates better understanding of ticks and the diseases they transmit in the development of new control strategies. Ticks: Biology, Disease and Control is written by an international collection of experts and covers in-depth information on aspects of the biology of the ticks themselves, various veterinary and medical tick-borne pathogens, and aspects of traditional and potential new control methods. A valuable resource for graduate students, academic researchers and professionals, the book covers the whole gamut of ticks and tick-borne diseases from microsatellites to satellite imagery and from exploiting tick saliva for therapeutic drugs to developing drugs to control tick populations. It encompasses the variety of interconnected fields impinging on the economically important and biologically fascinating phenomenon of ticks, the diseases they transmit and methods of their control.

Book chapter↗
USGS2005

Biology and conservation of Xantus's Murrelet: Discovery, taxonomy and distribution

The biology of Xantus's Murrelets Synthliboramphus hypoleucus is similar in many respects to better-studied Ancient Murrelets S. antiquus, especially regarding morphology and the species' precocial mode of post-hatching development. It nests mainly in rock crevices but also under shrubs on islands in southern California, United States, and northwestern Baja California, Mexico (27 o N to 34 o N). The species was discovered in 1859 by Janos Xantus. Two subspecies ( S. h. hypoleucus and S. h. scrippsi ) are recognized that show limited evidence of interbreeding. At sea, closely related Craveri's Murrelets S. craveri co-occur with Xantus's Murrelets off California and western Baja California during half the year, but the former species has a discrete breeding range in the Gulf of California, Mexico. Breeding was documented at 13 island groups between 1863 and 1976. Post-breeding dispersal as far north as central British Columbia, Canada (c. 52 o N) was observed in the 1940s to 1960s. A few Xantus's Murrelets disperse south of breeding colonies to Magdalena Bay, Baja California (c. 24 o N). The southernmost record is the type specimen collected by Xantus near Cabo San Lucas, Baja California (c. 23 o N). Chief threats to this species include introduced mammalian predators on breeding islands, heightened predation by natural predators in human-modified island habitats, and oil pollution. In January 2005, a Pacific Seabird Group special symposium, "Biology and conservation of the Xantus's Murrelet," highlighted conservation concerns and promoted publication of recent studies of this little-known alcid, with nine symposium papers published in this issue of Marine Ornithology. Much of what we know about Xantus's Murrelets has been learned in recent years, and many aspects of biology remain to be described.

Marine Ornithology: Journal of Seabird Research an↗
USGS2004

The Colorado Plateau: cultural, biological, and physical research

Stretching from the four corners of Arizona, New Mexico, Colorado, and Utah, the Colorado Plateau is a natural laboratory for a wide range of studies. This volume presents 23 original articles drawn from more than 100 research projects presented at the Sixth Biennial Conference of Research on the Colorado Plateau. This scientific gathering revolved around research, inventory, and monitoring of lands in the region. The book's contents cover management techniques for cultural, biological, and physical resources, representing collaborative efforts among federal, university, and private sector scientists and land managers. Chapters on cultural concerns cover benchmarks of modern southwestern anthropological knowledge, models of past human activity and impact of modern visitation at newly established national monuments, challenges in implementing the 1964 Wilderness Act, and opportunities for increased federal research on Native American lands. The section on biological resources comprises sixteen chapters, with coverage that ranges from mammalian biogeography to responses of elk at the urban-wildland interface. Additional biological studies include the effects of fire and grazing on vegetation; research on bald eagles at Grand Canyon and tracking wild turkeys using radio collars; and management of palentological resources. Two final chapters on physical resources consider a proposed rerouting of the Rio de Flag River in urban Flagstaff, Arizona, and an examination of past climate patterns over the Plateau, using stream flow records and tree ring data. In light of similarities in habitat and climate across the Colorado Plateau, techniques useful to particular management units have been found to be applicable in many locations. This volume highlights an abundance of research that will prove useful for all of those working in the region, as well as for others seeking comparative studies that integrate research into land management actions.

Utah;Colorado;Arizona;New Mexico↗
USGS1998

Status and trends of the nation's biological resources

This report is a comprehensive summary of the status and trends of our nation’s biological resources. The report describes the major processes and factors affecting biological resources, and it treats regional status and trends. Authors of the chapters and boxes in this two-volume report were drawn from federal and state agencies, universities, and private organizations, reflecting the U.S. Geological Survey’s national partnership approach to providing comprehensive, reliable information about our biological resources. Following scientific tradition, each chapter and box was peer-reviewed by anonymous scientific reviewers.

Report↗
USGS2012

Expanding biological data standards development processes for US IOOS: visual line transect observing community for mammal, bird, and turtle data

The US Integrated Ocean Observing System (IOOS) has recently adopted standards for biological core variables in collaboration with the US Geological Survey/Ocean Biogeographic Information System (USGS/OBIS-USA) and other federal and non-federal partners. In this Community White Paper (CWP) we provide a process to bring into IOOS a rich new source of biological observing data, visual line transect surveys, and to establish quality data standards for visual line transect observations, an important source of at-sea bird, turtle and marine mammal observation data. The processes developed through this exercise will be useful for other similar biogeographic observing efforts, such as passive acoustic point and line transect observations, tagged animal data, and mark-recapture (photo-identification) methods. Furthermore, we suggest that the processes developed through this exercise will serve as a catalyst for broadening involvement by the larger marine biological data community within the goals and processes of IOOS.

Conference Paper↗
USGS2002

Preface: Proceedings of the seventh international symposium on the biology and management of corigonid fishes

This volume is the proceedings of the Seventh International Symposium on the Biology and Management of Coregonid Fishes (ISBMCF). As in all six preceding symposia, the seventh meeting of the ISBMCF provided an international forum for the scientific review and discussion of the various taxonomic, biological, ecological, and management issues that surround this important group of Holarctic fishes. The collection of presentations for this conference was addressed in the following convened sessions: Genetics, Stocking, Fisheries, and Biology, as well as special sessions on Lake Baikal, Russia and Lake Femund, Norway. The conference comprised 53 oral and 58 poster presentations by scientists from Canada, the United Kingdom, France, Switzerland, Germany, Finland, Norway, Poland, Russia, and the United States. In total, there were 162 participants, including an unprecedented 18 scientists from Russia as the result of additional, concerted support.

Book chapter↗
USGS1999

Biological effects of the 1997/98 ENSO in Cook Inlet, Alaska

We have been conducting detailed studies of the biology of seabirds in relation to oceanography and forage fish ecology in lower Cook Inlet, Alaska, since 1995. This fortuitously allowed us to document biological effects of the 1997/98 ENSO in this region. Anomalously warm sea surface temperatures (SSTs) were observed in the Gulf of Alaska (GOA) beginning in June of 1997, but not in Cook Inlet until September, 1997. Warm temperature anomalies at the surface and at depth persisted until May of 1998, when temperatures returned to average in the GOA and Cook Inlet. Thus, temperature anomalies occurred outside the core window of productivity (June–August) for forage fish and seabirds in both 1997 and 1998. Abundance or production of phytoplankton, zooplankton, fish, and seabirds in lower Cook Inlet varied among years, and overall appeared to be depressed in 1998. We observed a few biological anomalies that might be attributed to ENSO effects: (1) a significant die-off of Common Murres occurred in March–May of 1998, (2) murres and Black-legged Kittiwakes were physiologically stressed during the 1998 breeding season, (3) murres failed to reproduce at one colony in 1998, (4) kittiwake breeding success was lower than usual at colonies in 1998, and (5) phenology of breeding was later in 1998 for both murres and kittiwakes. We presume that seabird die-offs, reduced productivity and delayed phenology were linked to a reduction or delay in food availability, but the mechanism by which anomalously warm water temperatures in winter reduce forage fish availability during the summer breeding season for seabirds is not known.

Alaska↗
USGS2020

Biology characterization breakout report

The primary goal of the biology characterization breakout group was to identify the strategies, tools, data priorities, and key partnerships needed to conduct baseline biological characterizations of deep-sea benthic environments across the U.S. EEZ in the Pacific. Discussions focused primarily on priorities for the characterization of deep-water (>200-meter depths) benthic biological communities; however, the group also emphasized that such characterizations need to be linked to efforts to characterize the overlying water column. The group was tasked with identifying how to prioritize exploration and characterization efforts, including how to identify priority geographic areas and specific methodologies needed to execute exploration activities. The expert community that provided input included representatives from various stakeholder groups actively working on deep-sea issues across the Pacific, including researchers and managers from government agencies, academic institutions, nongovernmental institutions, and the private sector. This report provides a summary of specific guidance identified as key for the successful exploration of deep-sea benthic habitats within the U.S. EEZ in the Pacific, as well as in adjacent international waters.

Conference Paper↗
USGS2023

Bridging the gap between mathematical biology and undergraduate education using applicable natural resource modeling

Mathematical biology is a wide field of study with many venues that undergraduate students can access through research. However, the topics of study for these students can be overwhelming, and many topics of study yield either only trivial results or abstract outcomes that are nonintuitive and diffcult to understand. We have used natural resource modeling, and more specifically, a partnership between academic researchers and federal scientists, as a bridge between undergraduate research and mathematical biology. Our collaboration is an interdisciplinary team that combines biology, mathematics, and statistics professors with government research scientists. As a team, we have mentored students through opportunities such as a Research Experiences for Undergraduates and other projects. In this article, we provide an overview of how we develop questions for undergraduates and outline two case studies, both of which resulted in peer reviewed journal articles. Last, we describe how we also transfer the results from these undergraduate projects to resource managers so the results may be applied to real world problems.

Letters in Biomathematics↗
USGS2009

Gap Analysis -A geographic approach to planning for biological diversity

The Mission of the Gap Analysis Project (GAP) is to promote conservation by providing broad geographic information on biological diversity to resource managers, planners, and policy makers who can use the information to make informed decisions. As part of the National Biological Information Infrastructure (NBII) —a collaborative program to provide increased access to data and information on the nation’s biological resources--GAP data and analytical tools have been used in hundreds of applications: from basic research to comprehensive state wildlife plans; from educational projects in schools to ecoregional assessments of biodiversity. The challenge: keeping common species common means protecting them BEFORE they become threatened. To do this on a state or regional basis requires key information such as land cover descriptions, predicted distribution maps for native animals, and an assessment of the level of protection currently given to those plants and animals. GAP works cooperatively with Federal, state, and local natural resource professionals and academics to provide this kind of information. GAP activities focus on the creation of state and regional databases and maps that depict patterns of land management, land cover, and biodiversity. These data can be used to identify “gaps” in conservation--instances where an animal or plant community is not adequately represented on the existing network of conservation lands. GAP is administered through the U.S. Geological Survey. Through building partnerships among disparate groups, GAP hopes to foster the kind of collaboration that is needed to address conservation issues on a broad scale.

GAP Bulletin↗
USGS1997

An evaluation of the rust fungus Gymnoconia nitensas a potential biological control agent for alien Rubus species in Hawaii

The rust fungus Gymnoconia nitens infects blackberry ( Rubus argutus ) systemically in regions of the continental United States, producing bright yellow–orange masses of spores on newly developing floricanes during springtime. In tests to determine the suitability of this rust as a biological control agent for R. penetrans in Hawaii, a species now thought to be conspecific with R. argutus, rooted cuttings of the Hawaiian plants were grown at North Carolina State University, inoculated, and observed. Other introduced weedy Rubus spp. in Hawaii, including R. ellipticus, R. rosifolius, and R. glaucus, as well as the two endemic species R. hawaiensis and R. macraei, also were inoculated. No species of Rubus are of commercial importance in Hawaii, but the protection of the native species, of which R. macraei is rare, was of utmost concern. The native Hawaiian species did not survive well in North Carolina in this study, however. Later availability of a plant pathogen containment laboratory in Hawaii enabled similar tests to be conducted at that facility. In addition to the above species, R. spectabilis (salmonberry), a species native to the Pacific Northwest with which the Hawaiian Rubus spp. are thought to share a common ancestor, was inoculated in Hawaii. Infection with G. nitens under natural field conditions becomes apparent only when sporulation occurs on floricanes the second year following infection. However, experimental inoculation led to early responses of chlorotic leaf flecking and puckering, leaf and stem contortion, and stem gall formation, indicating the sensitivity of R. penetrans (= R. argutus ), R. hawaiensis, and R. macraei to this rust. Apparent systemic infection also resulted in sporulation on one plant of R. macraei. Ability to attack the endemic species suggests that G. nitens would not be suitable for release in Hawaii as a biological control agent, at least on the islands with populations of the native species.

Hawaii↗
USGS2017

Climate change and alpine stream biology: progress, challenges, and opportunities for the future

In alpine regions worldwide, climate change is dramatically altering ecosystems and affecting biodiversity in many ways. For streams, receding alpine glaciers and snowfields, paired with altered precipitation regimes, are driving shifts in hydrology, species distributions, basal resources, and threatening the very existence of some habitats and biota. Alpine streams harbour substantial species and genetic diversity due to significant habitat insularity and environmental heterogeneity. Climate change is expected to affect alpine stream biodiversity across many levels of biological resolution from micro- to macroscopic organisms and genes to communities. Herein, we describe the current state of alpine stream biology from an organism-focused perspective. We begin by reviewing seven standard and emerging approaches that combine to form the current state of the discipline. We follow with a call for increased synthesis across existing approaches to improve understanding of how these imperiled ecosystems are responding to rapid environmental change. We then take a forward-looking viewpoint on how alpine stream biologists can make better use of existing data sets through temporal comparisons, integrate remote sensing and geographic information system (GIS) technologies, and apply genomic tools to refine knowledge of underlying evolutionary processes. We conclude with comments about the future of biodiversity conservation in alpine streams to confront the daunting challenge of mitigating the effects of rapid environmental change in these sentinel ecosystems.

Biological Reviews↗
USGS2020

Potential changes to the biology and challenges to the management of invasive sea lamprey Petromyzon marinus in the Laurentian Great Lakes due to climate change

Control programs are implemented to mitigate the damage caused by invasive species worldwide. In the highly invaded Great Lakes, the climate is expected to become warmer with more extreme weather and variable precipitation, resulting in shorter iced‐over periods and variable tributary flows as well as changes to pH and river hydrology and hydrogeomorphology. We review how climate change influences physiology, behavior, and demography of a damaging invasive species, sea lamprey ( Petromyzon marinus ), in the Great Lakes, and the consequences for sea lamprey control efforts. Sea lamprey control relies on surveys to monitor abundance of larval sea lamprey in Great Lakes tributaries. The abundance of parasitic, juvenile sea lampreys in the lakes is calculated by surveying wounding rates on lake trout ( Salvelinus namaycush ), and trap surveys are used to enumerate adult spawning runs. Chemical control using lampricides (i.e., lamprey pesticides) to target larval sea lamprey and barriers to prevent adult lamprey from reaching spawning grounds are the most important tools used for sea lamprey population control. We describe how climate change could affect larval survival in rivers, growth and maturation in lakes, phenology and the spawning migration as adults return to rivers, and the overall abundance and distribution of sea lamprey in the Great Lakes. Our review suggests that Great Lakes sea lamprey may benefit from climate change with longer growing seasons, more rapid growth, and greater access to spawning habitat, but uncertainties remain about the future availability and suitability of larval habitats. Consideration of the biology of invasive species and adaptation of the timing, intensity, and frequency of control efforts is critical to the management of biological invasions in a changing world, such as sea lamprey in the Great Lakes.

Great Lakes↗
USGS2008

Prioritizing conservation effort through the use of biological soil crusts as ecosystem function indicators in an arid region

Conservation prioritization usually focuses on conservation of rare species or biodiversity, rather than ecological processes. This is partially due to a lack of informative indicators of ecosystem function. Biological soil crusts (BSCs) trap and retain soil and water resources in arid ecosystems and function as major carbon and nitrogen fixers; thus, they may be informative indicators of ecosystem function. We created spatial models of multiple indicators of the diversity and function of BSCs (species richness, evenness, functional diversity, functional redundancy, number of rare species, number of habitat specialists, nitrogen and carbon fixation indices, soil stabilization, and surface roughening) for the 800,000-ha Grand Staircase-Escalante National Monument (Utah, U.S.A.). We then combined the indicators into a single BSC function map and a single BSC biodiversity map (2 alternative types of conservation value) with an unweighted averaging procedure and a weighted procedure derived from validations performance. We also modeled potential degradation with data from a rangeland assessment survey. To determine which areas on the landscape were the highest conservation priorities, we overlaid the function- and diversity-based conservation-value layers on the potential degradation layer. Different methods for ascribing conservation-value and conservation-priority layers all yielded strikingly similar results (r = 0.89-0.99), which suggests that in this case biodiversity and function can be conserved simultaneously. We believe BSCs can be used as indicators of ecosystem function in concert with other indicators (such as plant-community properties) and that such information can be used to prioritize conservation effort in drylands. ?? 2008 Society for Conservation Biology.

Conservation Biology↗
USGS1993

Critical review of the current knowledge of the biology of the American woodcock and its management on the breeding grounds

We critiqued previous work on the biology and management of the American woodcock (Scolopax minor) on the breeding grounds. We determined that little is known about habitat variables and weather extremes that may limit the population. Most investigators who attempted to define habitat requirements of the woodcock used inadequate sample sizes, limited the duration of their studies, did not account for effects of weather, or failed to adequately measure habitat variables. Furthermore, the effects of hunting on local or regional populations has never been adequately studied. We concluded that obtaining data to understand the biology of the woodcock and the effects of hunting is essential before managers can reverse the long-term decline of woodcock numbers.

Biological Report↗
USGS2006

The use of analysis of variance procedures in biological studies

The analysis of variance (ANOVA) is widely used in biological studies, yet there remains considerable confusion among researchers about the interpretation of hypotheses being tested. Ambiguities arise when statistical designs are unbalanced, and in particular when not all combinations of design factors are represented in the data. This paper clarifies the relationship among hypothesis testing, statistical modelling and computing procedures in ANOVA for unbalanced data. A simple two-factor fixed effects design is used to illustrate three common parametrizations for ANOVA models, and some associations among these parametrizations are developed. Biologically meaningful hypotheses for main effects and interactions are given in terms of each parametrization, and procedures for testing the hypotheses are described. The standard statistical computing procedures in ANOVA are given along with their corresponding hypotheses. Throughout the development unbalanced designs are assumed and attention is given to problems that arise with missing cells.

Applied Stochastic Models and Data Analysis↗
USGS2021

Multicriteria decisions and portfolio analysis: Land acquisition for biological and social objectives

Resource allocation for land acquisition is a common multi-objective problem that involves complex trade-offs. The National Wildlife Refuge System (NWRS) of the U.S. Fish and Wildlife Service currently uses the Targeted Resource Acquisition Comparison Tool (TRACT) to allocate funds from the Migratory Bird Conservation Fund (MBCF; established through the Migratory Bird Hunting and Conservation Act of 1934) for land acquisition based on cost-benefit analysis, regional priority rankings of candidate land parcels available for acquisition, and the overall biological contribution to duck population objectives. However, current policy encourages decision makers to consider societal and economic benefits of lands acquired, in addition to their biological benefits to waterfowl. These decisions about portfolio elements (i.e. individual land parcels) require an analysis of the difficult trade-offs among multiple objectives. In the last decade the application of multi-criteria decision analysis (MCDA) methods has been instrumental in aiding decision makers with complex multi-objective decisions. In this study, we present an alternative approach to developing land acquisition portfolios using MCDA and Modern Portfolio Theory (MPT). We describe the development of a portfolio decision analysis tool using constrained optimization for land acquisition decisions by the NWRS. We outline the decision framework, describe development of the prototype tool in Microsoft Excel, and test the results of the tool using land parcels submitted as candidates for MBCF funding in 2019. Our results indicate that the constrained optimization outperformed the traditional TRACT method and ad hoc portfolios developed using current NWRS criteria.

Ecological Applications↗
USGS2022

Classifying behavior from short-interval biologging data: An example with GPS tracking of birds

Recent advances in digital data collection have spurred accumulation of immense quantities of data that have potential to lead to remarkable ecological insight, but that also present analytic challenges. In the case of biologging data from birds, common analytical approaches to classifying movement behaviors are largely inappropriate for these massive data sets. We apply a framework for using K -means clustering to classify bird behavior using points from short time interval GPS tracks. K -means clustering is a well-known and computationally efficient statistical tool that has been used in animal movement studies primarily for clustering segments of consecutive points. To illustrate the utility of our approach, we apply K -means clustering to six focal variables derived from GPS data collected at 1–11 s intervals from free-flying bald eagles ( Haliaeetus leucocephalus ) throughout the state of Iowa, USA. We illustrate how these data can be used to identify behaviors and life-stage- and age-related variation in behavior. After filtering for data quality, the K -means algorithm identified four clusters in >2 million GPS telemetry data points. These four clusters corresponded to three movement states: ascending, flapping, and gliding flight; and one non-moving state: perching. Mapping these states illustrated how they corresponded tightly to expectations derived from natural history observations; for example, long periods of ascending flight were often followed by long gliding descents, birds alternated between flapping and gliding flight. The K -means clustering approach we applied is both an efficient and effective mechanism to classify and interpret short-interval biologging data to understand movement behaviors. Furthermore, because it can apply to an abundance of very short, irregular, and high-dimensional movement data, it provides insight into small-scale variation in behavior that would not be possible with many other analytical approaches.

Ecology and Evolution↗