Geology ReportsSearch

USGS · 70212688

Moving beyond p<0.05 in ecotoxicology: A guide for practitioners

Abstract

Statistical inferences play a critical role in ecotoxicology. Historically, Null Hypothesis Significance Testing (NHST) has been the dominant method for inference in ecotoxicology. As a brief and informal definition of the NHST approach, researchers compare (or test) an experimental treatment or observation against a hypothesis of no relationship or effect (the null hypothesis) using the collected data to see if the observed values are statistically significant given predefined error rates. The resulting probability of observing a value equal to or greater than the observed value assuming the null hypothesis is true is the p-value. Historically, criticisms of NHST have existed for almost a century and more recently these have grown to the point where statisticians, including the American Statistical Association, have felt the need to clarify the role of NHST and p-values in science beyond their current, common use. These limitations also exist in ecotoxicology. For example, a review of the 2010 Environmental Toxicology & Chemistry (ET&C) volume found many authors did not correctly report p-values. We repeated this review looking at the 2019 volume of ET&C and the incorrect reporting of p-values still occurred almost a decade later. Problems with NHST and p-values highlight the need for statistical inferences besides NHST, something that has long been known in ecotoxicology and the broader scientific and statistical communities. Furthermore, concerns such as these led the Executive Director of the American Statistical Association to recommend against use of statistical significance in 2019. In light of these criticisms, however, ecotoxicologists require alternative methods. In this paper, we describe some alternative methods including confidence intervals, regression analysis, dose-response curves, Bayes factors, survival analysis, and model selection. Lastly, we provide insights for what ecotoxicology might look like in a post-p-value world.

Explore related subjects

Keep this discovery

Explore connections, maps & timelines

BibTeXRIS

Richard A. Erickson, Barnett A. Rattner. 2020-06-15. Moving beyond p<0.05 in ecotoxicology: A guide for practitioners. https://doi.org/10.1002/etc.4800

Cite the original work for its findings. Save a collection to share your selection of sources.

KEEP EXPLORING

Related USGS reports

Using organic compounds and salt mixtures to investigate potential mechanisms of major ion toxicity to the mayfly Neocloeon triangulifer

Field assessments and laboratory studies have demonstrated that mayflies (Ephemeroptera) are relatively sensitive to increased concentrations of major geochemical ions (Na + , Ca 2+ , Mg 2+ , K + , Cl − , SO 4 2− , HCO 3 − /CO 3 2- ), but much remains to be learned about potential mechanisms of toxicity. In the present study, we sought to determine whether solution osmolarity is sufficient to predict the toxic effects of major ions to a mayfly, Neocloeon triangulifer . We further investigated whether binary mixtures of major ion salts with common cations or common anions provide evidence of concentration addition or independent action, potentially illuminating toxicity drivers for this species. Finally, we sought to determine if there are mechanisms for major ion toxicity to mayflies that are comparable to those for other species. The toxicity of single salts showed a Ca-dependent correlation with the total component concentration (the sum of individual ion concentrations, a close correlate of osmolarity), but the effect concentrations were well below those causing toxicity from mannitol (presumed to have only an osmotic effect), suggesting that a general osmotic effect is not responsible for major ion toxicity in this species. The mixture experiments consistently indicated additive toxicity and consistency with the relationship to total component concentration, which supports a single toxic mechanism and thus no evidence for ion-specific mechanisms, as reported for other species. Given the lack of evidence of ion-specific toxicity, the total component metric is likely useful for a broad range of ionic compositions.

Environmental Toxicology and Chemistry

Accumulation of per- and polyfluoroalkyl substances (PFAS) and their association with immune parameters in nestling ospreys (Pandion haliaetus) from Chesapeake and Delaware Bays, USA

Per- and polyfluoroalkyl substances (PFAS) are a class of widespread, environmentally persistent compounds that pose a potential threat to wildlife and human health. Despite recent efforts to reduce the use of long-chain PFAS in industrial practices and commercial/consumer products, the persistence and solubility of PFAS have led to their detection in wildlife on a global scale. Osprey ( Pandion haliaetus ) have long been used as a sentinel species with an extensive history of serving as an effective bioindicator of contamination. Here we report on a large-scale evaluation of PFAS and potential health effects in osprey from the Chesapeake and Delaware Bays, USA. In 2011 and 2015, we collected plasma samples from osprey nestlings throughout the Chesapeake and Delaware Bay watersheds. We quantified 40 PFAS congeners in osprey plasma via liquid chromatography-mass spectrometry and analyzed plasma for indicators of immune and thyroid function, and plasma biochemistry. In all birds, perfluorooctanesulfonic acid (PFOS) was the most commonly detected PFAS, followed by perfluoroundecanoic acid, (PFUnA) and perfluorodecanoic acid (PFDA). In nestling plasma from Chesapeake Bay, PFOS tended to be a higher average contributor to PFAS profiles compared to samples from Delaware Bay. In contrast, long-chain perfluoroalkyl carboxylic acids (PFCAs) such as PFUnA and PFDA comprised larger percentages of total PFAS in osprey plasma from Delaware Bay relative to Chesapeake Bay. While some PFAS concentrations were associated with plasma health indicators, the proportion of variation explained was low. Overall, our study provides a more thorough understanding of PFAS presence in the Chesapeake and Delaware Bays and is one of the first to examine whether PFAS exposure is associated with adverse health effects in wildlife.

Chesapeake and Delaware Bays

A critical perspective on the Society of Environmental Toxicology and Chemistry’s adherence to founding principles—Opportunities for the future

The Society of Environmental Toxicology and Chemistry (SETAC) is a global organization whose mission is the advancement of environmental science and the promotion of science-informed decision making. On SETAC’s 45th anniversary, the following question was raised: Are the 1979 founding principles of SETAC, multidisciplinary approaches to solving environmental problems, multisector engagement and scientific objectivity, still relevant to the fulfillment of its mission? In a special session held at the 45th Annual Meeting in Fort Worth, Texas, U.S., a critical evaluation of the founding principles was initiated by reviewing SETAC’s history and ongoing activities, and recommendations were made for the future. With few exceptions, participants appreciated SETAC’s purposeful efforts to approach challenging environmental issues through multisector balance, an approach that is unique amongst scientific societies. We recognized that scientists have biases and views of what they find important, regardless of employing organization, and that objectivity is best served by being aware of these biases and views. SETAC’s founding principles have stood the test of time and continue to provide a strong foundation for the Society’s mission, and with a few suggested improvements, will continue to be instrumental in guiding environmental science, stewardship and policy into the future. The significance of SETAC’s contribution of robust science grounded in reliable evidence and data was recognized as being especially crucial at this time of triple planetary crisis (climate change, pollution and biodiversity loss), compounded by rapid technological developments and geopolitical issues.

Environmental Toxicology and Chemistry