Geology ReportsSearch

USGS · 70199138

Cytonuclear discordance in the Florida Everglades invasive Burmese python (Python bivittatus) population reveals possible hybridization with the Indian python (P. molurus)

Abstract

The invasive Burmese python ( Python bivittatus ) has been reproducing in the Florida Everglades since the 1980s. These giant constrictor snakes have caused a precipitous decline in small mammal populations in southern Florida following escapes or releases from the commercial pet trade. To better understand the invasion pathway and genetic composition of the population, two mitochondrial (mtDNA) loci across 1,398 base pairs were sequenced on 426 snakes and 22 microsatellites were assessed on 389 snakes. Concatenated mtDNA sequences produced six haplotypes with an average nucleotide and haplotype diversity of π = 0.002 and h = 0.097, respectively. Samples collected in Florida from morphologically identified P. bivittatus snakes were similar to published cytochrome oxidase 1 and cytochrome b sequences from both P. bivittatus and Python molurus and were highly divergent (genetic distances of 5.4% and 4.3%, respectively). The average number of microsatellite alleles and expected heterozygosity were N A = 5.50 and H E = 0.60, respectively. Nuclear Bayesian assignment tests supported two genetically distinct groups and an admixed group, not geographically differentiated. The effective population size ( N E = 315.1) was lower than expected for a population this large, but reflected the low genetic diversity overall. The patterns of genetic diversity between mtDNA and microsatellites were disparate, indicating nuclear introgression of separate mtDNA lineages corresponding to cytonuclear discordance. The introgression likely occurred prior to the invasion, but genetic information on the native range and commercial trade is needed for verification. Our finding that the Florida python population is comprised of distinct lineages suggests greater standing variation for adaptation and the potential for broader areas of suitable habitat in the invaded range.

Explore related subjects

90° N90° S · 180° W ← longitude → 180° E
Source-reported bounding extent: 24.943728712051445° to 26.45090222367262° latitude; -81.97448730468749° to -79.99969482421875° longitude. This indicates report coverage, not an exact sampling location. View area on OpenStreetMap.

Keep this discovery

Explore connections, maps & timelines

BibTeXRIS

Margaret E. Hunter, Nathan A. Johnson, Brian J. Smith, Michelle C. Davis, John S. Butterfield, Ray W. Snow, Kristen M. Hart. 2018-08-19. Cytonuclear discordance in the Florida Everglades invasive Burmese python (Python bivittatus) population reveals possible hybridization with the Indian python (P. molurus). https://doi.org/10.1002/ece3.4423

Cite the original work for its findings. Save a collection to share your selection of sources.

KEEP EXPLORING

Related USGS reports

Conflicts and collisions with an endangered carnivore: Landscape drivers and spatial risk pattern

Human–wildlife conflicts and anthropogenic mortality are expected to increase with the continuous encroachment on natural habitats within and around protected areas, yet the processes governing these risks remain poorly understood. We investigated the spatiotemporal dynamics and drivers of two distinct processes involving the endangered Florida panther ( Puma concolor coryi ; hereafter, panther): (1) direct human–panther interactions and livestock depredation (hereafter, conflicts), and (2) vehicle collisions (hereafter, collisions). Using long-term data collected between 2006 and 2022 within the panther's breeding range in Southwest Florida, USA, we applied dynamic occupancy models to estimate probabilities of occurrence, colonization, and extinction of conflicts and collisions while accounting for imperfect detection. A total of 277 conflicts and 239 collisions were recorded during the study period. Occurrence probabilities for both conflicts and collisions increased during the early years of the study and subsequently stabilized. Landscape configuration consistently showed strong associations with both processes. Conflicts were more likely in areas with fragmented but closely spaced habitat patches, whereas collisions were more likely along road segments characterized by connected landscapes with low resistance to panther movement. In contrast, areas that showed greater distances between habitat patches and increased proportions of protected area were associated with lower probabilities of conflict or collision persistence over time. A predictive map was created to highlight areas with high probability of conflict and road segments with high probability of collision in Southwest Florida, USA. Identifying areas with elevated risk can inform targeted mitigation strategies, including habitat management, wildlife crossings, and outreach efforts, and further support long-term coexistence between humans and large carnivore populations.

Florida

Disease, drought, and warming: A triple threat to a declining high-elevation amphibian

Managing species in an uncertain future is a reality for natural resource decision makers. Climate change is expected to exacerbate threats such as habitat loss and disease, and cause phenological mismatches, but there is uncertainty in the magnitude of these effects. Amphibians are among the most threatened taxa on earth, and most species in North America are uniquely tied to water availability for breeding, larval development, thermal refugia, and food availability. Changes in water availability and temperature may result in phenological mismatches with one or more of these processes. Thus, quantifying the dependency of amphibians to water on the landscape is critical to understanding how species may respond, as well as understanding the interplay with other threats, such as disease. We developed a dynamic co-occurrence occupancy model to explore the effects of climate change on the breeding occurrence of boreal toads ( Anaxyrus boreas ) and the amphibian chytrid fungus ( Batrachochytrium dendrobatidis , Bd) in the southern Rocky Mountains (SRM). We derived novel covariates to test hypotheses related to multi-generational impacts of climate on the dynamics of both boreal toad breeding and Bd. We report estimates of current (2001–2019) and future (2055–2069) occupancy under a range of plausible climate scenarios. The probability of boreal toad breeding occurrence at a site in the SRM declined > 40% from 2001 to 2019, and further declines are likely under future scenarios, particularly as active season length increases. To help integrate this information into management, we developed a web-based decision support tool to summarize predicted future hydrological and occupancy conditions.

Colorado, New Mexico, Wyoming

A 2.5 km movement by a potentially ill white-tailed deer along Nantasket Beach in suburban Massachusetts, USA

White-tailed deer ( Odocoileus virginianus ) ecology has received significant research attention, yet there is a need for further synthetic work on the species across environmental contexts and research areas. Opportunistic natural history accounts can help identify new conceptual links and research directions by offering new observations and ideas, synthesizing context from the literature, and highlighting gaps in understanding. We provide an opportunistic account of a 2.5 km movement of a white-tailed deer walking, wading, and swimming along Nantasket Beach in a suburban context in Massachusetts, USA. The deer displayed behaviors that could potentially be reflective of trauma, disorientation, or illness, including possibly symptomatic head movements and crouching behavior. The behavior of the deer may also have been influenced by the coastal and suburban context in which the observation took place. Our account explores swimming, deer behavior, and possible illness in a coastal, suburban context. We highlight the need for additional research on the ecology and management of white-tailed deer, including swimming and disease in coastal, marine, and developed contexts, and intersections across these areas.

Massachusetts