Geology Reports⌕ Search
Home/Archive/USGS

USGS · 70193059

Origins and bioavailability of dissolved organic matter in groundwater

Yuan Shen·Francis H. Chapelle·Eric W. Strom·Ronald Benner
View original source ↗Export metadata ↓

Abstract

Dissolved organic matter (DOM) in groundwater influences water quality and fuels microbial metabolism, but its origins, bioavailability and chemical composition are poorly understood. The origins and concentrations of dissolved organic carbon (DOC) and bioavailable DOM were monitored during a long-term (2-year) study of groundwater in a fractured-rock aquifer in the Carolina slate belt. Surface precipitation was significantly correlated with groundwater concentrations of DOC, bioavailable DOM and chromophoric DOM, indicating strong hydrological connections between surface and ground waters. The physicochemical and biological processes shaping the concentrations and compositions of DOM during its passage through the soil column to the saturated zone are conceptualized in the regional chromatography model. The model provides a framework for linking hydrology with the processes affecting the transformation, remineralization and microbial production of DOM during passage through the soil column. Lignin-derived phenols were relatively depleted in groundwater DOM indicating substantial removal in the unsaturated zone, and optical properties of chromophoric DOM indicated lower molecular weight DOM in groundwater relative to surface water. The prevalence of glycine, γ -aminobutyric acid, and d -enantiomers of amino acids indicated the DOM was highly diagenetically altered. Bioassay experiments were used to establish DOC-normalized yields of amino acids as molecular indicators of DOM bioavailability in groundwater. A relatively small fraction (8 ± 4 %) of DOC in groundwater was bioavailable. The relatively high yields of specific d -enantiomers of amino acids indicated a substantial fraction (15–34 %) of groundwater DOC was of bacterial origin.

Explore related subjects

BiogeochemistryArticle

Keep this discovery

Explore connections, maps & timelines

BibTeXRIS

Yuan Shen, Francis H. Chapelle, Eric W. Strom, Ronald Benner. 2014-09-05. Origins and bioavailability of dissolved organic matter in groundwater. https://doi.org/10.1007/s10533-014-0029-4

Cite the original work for its findings. Save a collection to share your selection of sources.

KEEP EXPLORING

Related USGS reports

USGS2026

Water table rise sustains carbon release from soils in wetland-dominated landscapes: An intact soil core study

Wetland-dominated landscapes influence carbon cycling through their potential to act as both carbon sinks and sources. Wetlands in low-relief landscapes have dynamic terrestrial-aquatic interfaces that change seasonally with variable surface water and groundwater levels. However, few studies have directly quantified dissolved organic matter (DOM) release and greenhouse gas (CO 2 , CH 4 ) fluxes from wetland soils along terrestrial-aquatic interfaces as they are seasonally re-saturated by groundwater. To estimate groundwater-mediated soil DOM and gas fluxes, we performed laboratory simulations of vertical groundwater rise on intact soil cores collected from four Delmarva bay wetlands located in the Mid-Atlantic United States. At each wetland, one core was collected from within the wetland basin and the other from the transitional zone at the basin edge. Cores were re-saturated with groundwater over 15 days and then kept fully saturated for an additional 25 days. Source groundwater, soil porewater, and exfiltrated surface water samples were collected and analyzed for pH, ORP, DOM concentration, and DOM optical indices. In both the wetland and transition zone cores, porewater DOM concentrations increased over the wet up and were sustained during prolonged saturation. Optical indices shifted from recently produced, microbial-like signatures towards aromatic, terrestrial-like signatures. Fluxes of CO 2 decreased as the duration of soil saturation increased and soil cores switched from CH 4 sinks to sources upon full soil core saturation. Results indicate that groundwater rise sustains carbon mobilization from soils in wetland-dominated landscapes, emphasizing the need to understand how climate-driven changes to groundwater dynamics may affect carbon fluxes along terrestrial-aquatic interfaces.

Delaware, Maryland↗
USGS2025

Seasonal synchronicity and multi-decadal stability of headwater biogeochemistry in the northern temperate zone

Temporal patterns in chemistry of headwater streams reflect responses of water and elemental cycles to perturbations occurring at local to global scales. We evaluated multi-scale temporal patterns in up to 32 y of monthly observations of stream chemistry (ammonium, calcium, dissolved organic carbon, nitrate, total dissolved phosphorus, and sulfate) in 22 reference catchments within the northern temperate zone of North America. Multivariate autoregressive state-space (MARSS) models were applied to quantify patterns at multi-decadal, seasonal, and shorter intervals during a period that encompassed warming climate, seasonal changes in precipitation, and regional declines in atmospheric deposition. Significant long-term trends in solute concentrations within a subset of the catchments were consistent with recovery from atmospheric deposition (e.g., calcium, nitrate, sulfate) and increased precipitation (e.g., dissolved organic carbon). Lack of evidence for multi-decadal trends in most catchments suggests resilience of northern temperate ecosystems or that subtle net effects of simultaneous changes in climate and disturbance regimes do not result in directional trends. Synchronous seasonal oscillations of solute concentrations occurred across many catchments, reflecting shared climate and biotic drivers of seasonality within the northern temperate zone. Despite shared patterns among catchments at a seasonal scale, multi-scale temporal patterns were statistically distinct among even adjacent headwater catchments, implying that local attributes of headwater catchments modify the signals imparted by atmospheric phenomena and regional disturbances. To effectively characterize hydrologic and biogeochemical responses to changing climate and disturbance regimes, catchment monitoring programs could include multiple streams with contributing areas that encompass regional heterogeneity in vegetation, topography, and elevation. Overall, detection of long-term patterns and trends requires monitoring multiple catchments at a frequency that captures periodic variation (e.g., seasonality) and a duration encompassing the perturbations of interest.

Biogeochemistry↗
USGS2025

Mercury cycling in the Czech GEOMON network catchments recovering from acid deposition and facing climate change

We used the catchment mass balance approach to investigate mercury (Hg) cycling at the 14 forested GEOMON catchments of the Czech Geological Survey. The temperate forest catchments had variable exposure to historic high sulfur (S) and Hg emissions, and span a range of size and elevation. We monitored monthly Hg inputs (bulk precipitation, throughfall, litterfall) and outputs (stream runoff) during 2020–2022. The catchments spanned a large gradient of historic Hg deposition, but current Hg patterns more closely aligned with catchment factors like local climate, as influenced by elevation, dissolved organic carbon (DOC) concentrations, and geology. The dominant pathway of Hg input was litterfall (averaging 44.5 ± 15.7 µg m −2 yr −1 ; > 91% of total input). Two surprising findings were that GEOMON had low Hg concentrations and fluxes in general but had the highest litterfall Hg fluxes in Europe, and these increased even further in forested areas that had bark beetle infestations. Gaseous elemental mercury (GEM), measured using passive samplers, was consistently low (1.25 to 1.66 ng m −3 ) across the 14 catchments. Stream Hg output varied across catchments and averaged 1.5 ± 1.7 µg m −2 yr −1 . The average Hg retention rate at the 14 GEOMON catchments, calculated as the fraction of average Hg inputs (throughfall + litterfall) that remained in the catchment and did not run off in streamwater, was 97%. The high catchment Hg retention combined with its strong association with DOC suggests that with climate change intensification of carbon cycling, these catchments will be a Hg source for decades to come.

Biogeochemistry↗