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CDFISH: an individual-based, spatially-explicit, landscape genetics simulator for aquatic species in complex riverscapes

Erin L. Landguth·Clint C. Muhlfeld·Gordon Luikart
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Abstract

We introduce Cost Distance FISHeries (CDFISH), a simulator of population genetics and connectivity in complex riverscapes for a wide range of environmental scenarios of aquatic organisms. The spatially-explicit program implements individual-based genetic modeling with Mendelian inheritance and k -allele mutation on a riverscape with resistance to movement. The program simulates individuals in subpopulations through time employing user-defined functions of individual migration, reproduction, mortality, and dispersal through straying on a continuous resistance surface.

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Erin L. Landguth, Clint C. Muhlfeld, Gordon Luikart. 2011-08-05. CDFISH: an individual-based, spatially-explicit, landscape genetics simulator for aquatic species in complex riverscapes. https://doi.org/10.1007/s12686-011-9492-6

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