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Research about San Francisco Bay area

Source-linked reports with geographic coverage including San Francisco Bay area.

At least 55 records · Page 3Linked to original sources
USGS1996

Seasonal fluctuations of water quality in San Francisco Bay during the first three years of the regional monitoring program, 1993-1995

The 1995 Regional Monitoring Program (RMP) Annual Report includes monitoring results from the Base Program, Pilot and Special Studies, and summary and perspective articles contributed by RMP investigators and other scientists. The purpose of the RMP is to provide information on the status and trends of contamination in San Francisco Estuary water, sediment, and bivalve tissue, and to assess the potential for biological effects from exposure to those contaminants. The objectives, background, and rationale for the RMP are described in the Introduction (Chapter 1). The 1995 RMP Base Program was essentially the same as in 1994. Water monitoring was conducted in February, April, and August at 24 stations throughout the Estuary. Aquatic bioassays were conducted in February and August at 13 of those stations. Sediment monitoring was conducted in February and August at all 24 stations, and sediment bioassays were conducted at 12 of those stations. Bioaccumulation of contaminants by transplanted bivalves was monitored at 15 stations during two 90 day sampling periods: January to April and July to September. Pilot Studies on benthic fauna and tidal wetlands were conducted and Special Studies on trends in trace elements and development of sediment indicators were also included.

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USGS1995

Look before you build: Geologic studies for safer land development in the San Francisco Bay area

This Circular provides a general description of the types of geologic hazards that exist throughout the United States. In nontechnical language this book describes how geologic information can be incorporated in the land-use development process and contains useful discussion of several examples from the San Francisco Bay area and elsewhere in the United States of how geologic information is already being used in the development process by some cities and counties.

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USGS1987

Modeling of estuarne chlorophyll a from an airborne scanner

Near simultaneous collection of 34 surface water samples and airborne multispectral scanner data provided input for regression models developed to predict surface concentrations of estuarine chlorophyll a. Two wavelength ratios were employed in model development. The ratios werechosen to capitalize on the spectral characteristics of chlorophyll a, while minimizing atmospheric influences. Models were then applied to data previously acquired over the study area thre years earlier. Results are in the form of color-coded displays of predicted chlorophyll a concentrations and comparisons of the agreement among measured surface samples and predictions basedon coincident remotely sensed data. The influence of large variations in fresh-water inflow to the estuary are clearly apparent in the results. The synoptic view provided by remote sensing is another method of examining important estuarine dynamics difficult to observe from in situ sampling alone.

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USGS1987

System designed for issuing landslide alerts in the San Francisco Bay area

A system for forecasting landslides during major storms has been developed for the San Francisco Bay area by the U.S Geological Survey and was successfully tested during heavy storms in the bay area during February 1986. Based on the forecasts provided by the USGS, the National Weather Service (NWS) included landslide warnings in its regular weather forecasts or in special weather statements transmitted to local radio and television stations and other news media. USGS scientists said the landslide forecasting and warning system for the San Francisco Bay area can be used as a prototype in developing similar systems for other parts of the Nation susceptible to landsliding. Studies show damage from landslides in the United States averages an estimated $1.5 billion per year.

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USGS1986

Metabolism of reduced methylated sulfur compounds in anaerobic sediments and by a pure culture of an estuarine methanogen

Addition of dimethylsulfide (DMS), dimethyldisulfide (DMDS), or methane thiol (MSH) to a diversity of anoxic aquatic sediments (e.g., fresh water, estuarine, alkaline/hypersaline) stimulated methane production. The yield of methane recovered from DMS was often 52 to 63%, although high concentrations of DMS (as well as MSH and DMDS) inhibited methanogenesis in some types of sediments. Production of methane from these reduced methylated sulfur compounds was blocked by 2-bromoethanesulfonic acid. Sulfate did not influence the metabolism of millimolar levels of DMS, DMDS, or MSH added to sediments. However, when DMS was added at ∼2-μM levels as [ 14 C]DMS, metabolism by sediments resulted in a 14 CH 4 / 14 CO 2 ratio of only 0.06. Addition of molybdate increased the ratio to 1.8, while 2-bromoethanesulfonic acid decreased it to 0, but did not block 14 CO 2 production. These results indicate the methanogens and sulfate reducers compete for DMS when it is present at low concentrations; however, at high concentrations, DMS is a “noncompetitive” substrate for methanogens. Metabolism of DMS by sediments resulted in the appearance of MSH as a transient intermediate. A pure culture of an obligately methylotrophic estuarine methanogen was isolated which was capable of growth on DMS. Metabolism of DMS by the culture also resulted in the transient appearance of MSH, but the organism could grow on neither MSH nor DMDS. The culture metabolized [ 14 C]-DMS to yield a 14 CH 4 / 14 CO 2 ratio of ∼2.8. Reduced methylated sulfur compounds represent a new class of substrates for methanogens and may be potential precursors of methane in a variety of aquatic habitats.

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USGS1986

Variability in the fractionation of Cu, Ag, and Zn among cytosolic proteins in the bivalve Macoma balthica

Gel filtration chromatographs of cytosols from the clam Macorna balthica analysed from both field and laboratory treated specimens showed that uptake of Cu, Ag, and Zn in the metallothionein-like protein (MLP) pool follows exposure both in nature and in the laboratory. Specimens collected from San Francisco Bay over 18 mo showed strong temporal variability in the fractionation of the metals among cytosolic proteins. A marked increase in Cu, Ag, and Zn in a very low molecular weight pool occurred when concentrations were highest In the MLP pool. The correlation between total cytosollc metal and MLP-metal also appeared to approach a hyperbolic character at the highest concentrations.

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USGS1985

Benthic fluxes in San Francisco Bay

Measurements of benthic fluxes have been made on four occasions between February 1980 and February 1981 at a channel station and a shoal station in South San Francisco Bay, using in situ flux chambers. On each occasion replicate measurements of easily measured substances such as radon, oxygen, ammonia, and silica showed a variability (??1??) of 30% or more over distances of a few meters to tens of meters, presumably due to spatial heterogeneity in the benthic community. Fluxes of radon were greater at the shoal station than at the channel station because of greater macrofaunal irrigation at the former, but showed little seasonal variability at either station. At both stations fluxes of oxygen, carbon dioxide, ammonia, and silica were largest following the spring bloom. Fluxes measured during different seasons ranged over factors of 2-3, 3, 4-5, and 3-10 (respectively), due to variations in phytoplankton productivity and temperature. Fluxes of oxygen and carbon dioxide were greater at the shoal station than at the channel station because the net phytoplankton productivity is greater there and the organic matter produced must be rapidly incorporated in the sediment column. Fluxes of silica were greater at the shoal station, probably because of the greater irrigation rates there. N + N (nitrate + nitrite) fluxes were variable in magnitude and in sign. Phosphate fluxes were too small to measure accurately. Alkalinity fluxes were similar at the two stations and are attributed primarily to carbonate dissolution at the shoal station and to sulfate reduction at the channel station. The estimated average fluxes into South Bay, based on results from these two stations over the course of a year, are (in mmol m-2 d-1): O2 = -27 ?? 6; TCO2 = 23 ?? 6; Alkalinity = 9 ?? 2; N + N = -0.3 ?? 0.5; NH3 = 1.4 ?? 0.2; PO4 = 0.1 ?? 0.4; Si = 5.6 ?? 1.1. These fluxes are comparable in magnitude to those in other temperate estuaries with similar productivity, although the seasonal variability is smaller, probably because the annual temperature range in San Francisco Bay is smaller. Budgets constructed for South San Francisco Bay show that large fractions of the net annual productivity of carbon (about 90%) and silica (about 65%) are recycled by the benthos. Substantial rates of simultaneous nitrification and denitrification must occur in shoal areas, apparently resulting in conversion to N2 of 55% of the particulate nitrogen reaching the sediments. In shoal areas, benthic fluxes can replace the water column standing stocks of ammonia in 2-6 days and silica in 17-34 days, indicating the importance of benthic fluxes in the maintenance of productivity. Pore water profiles of nutrients and Rn-222 show that macrofaunal irrigation is extremely important in transport of silica, ammonia, and alkalinity. Calculations of benthic fluxes from these profiles are less accurate, but yield results consistent with chamber measurements and indicate that most of the NH3, SiO2, and alkalinity fluxes are sustained by reactions occurring throughout the upper 20-40 cm of the sediment column. In contrast, O2, CO2, and N + N fluxes must be dominated by reactions occurring within the upper one cm of the sediment-water interface. While most data support the statements made above, a few flux measurements are contradictory and demonstrate the complexity of benthic exchange. ?? 1985 Dr W. Junk Publishers.

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USGS1984

Chemical determination of particulate nitrogen in San Francisco Bay. Nitrogen: chlorophyll a rations in plankton

Particulate nitrogen (PN) and chlorophyll a (Chl a ) were measured in the northern reach of San Francisco Bay throughout 1980. The PN values were calculated as the differences between unfiltered and filtered (0&middot;4 &mu;m) samples analyzed using the UV-catalyzed peroxide digestion method. The Chl a values were measured spectrophotometrically, with corrections made for phaeopigments. The plot of all PNChla data was found to be non-linear, and the concentration of suspended particulate matter (SPM) was found to be the best selector for linear subsets of the data. The best-fit slopes of PNChla plots, as determined by linear regression (model II), were interpreted to be the N: Chl a ratios of phytoplankton. The Y -intercepts of the regression lines were considered to represent easily-oxidizable detrital nitrogen (EDN). In clear water ( < 10 mg l &minus;1 SPM), the N: Chl a ratio was 1&middot;07 &mu;g-at N per &mu;g Chl a . It decreased to 0&middot;60 in the 10&ndash;18 mg l &minus;1 range and averaged 0&middot;31 in the remaining four ranges (18&ndash;35, 35&ndash;65, 65&ndash;155, and 155&ndash;470 mg l &minus;1 ). The EDN values were less than 1 &mu;g-at N l &minus;1 in the clear water and increased monotonically to almost 12 &mu;g-at N l &minus;1 in the highest SPM range. The N: Chl a ratios for the four highest SPM ranges agree well with data for phytoplankton in light-limited cultures. In these ranges, phytoplankton-N averaged only 20% of the PN, while EDN averaged 39% and refractory-N 41%.

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USGS1982

Enrichment and association of lead and bacteria at particulate surfaces in a salt-marsh surface layer

The particle-laden surface layer (approx 150-370 mu m) and subsurface waters of a South San Francisco Bay salt marsh were sampled over 2 tidal cycles and analyzed for particle numbers and particulate-associated and total concentrations of Pb and bacteria. Laboratory studies examined the ability of a bacterial isolate from the surface layer and a bacterial 'film-former' to sorb Pb at environmentally significant concentrations in seawater. Degrees by which Pb concentrated in the surface layer relative to the subsurface strongly correlated with enrichments of surface layer bacteria (bacterioneuston). A significant fraction of the bacterioneuston and surface layer Pb were associated with particles. Particle-bound bacterioneuston may interact with Pb at particulate surfaces in this microenvironment.

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USGS1981

Two examples of seismic zonation in the San Francisco Bay region

The science of earthquakes in complex, requiring data and research in seismology, geology, soil mechanics, geophysics, hydrology, and engineering. Nevertheless, if earthquake hazards are to be reduced, earth science information must be translated from scientific and technical language into a form that can be effectively used by planners and decisionmakers. Out of the need to use earth science information in local and regional planning and decisionmaking came an experimental program-the San Francisco Bay Region Environment and Resources Planning Study. the study, begun in 1970, was jointly supported by the U.S Geological Survey and the U.S Department of Housing and Urban Development. The Association of Bay Area Governments and the planning firm of William Spangle and Associates, Inc., participated in the study and provided a liaison and communication link with other regional agencies and with local governments. Since 1975, the composition of the core group within the U.S Geological Survey concerned with seismic zonation has evolved to include seismoloists and engineers concerned with probabilistic approaches to earthquake damage and a planner to assist in the information transfer from scientists and engineers to city, county, and regional planning staffs. Three events have encouraged communities to attempt seismic zonation: passage of the Alquist Priolo Act by the California Legislature requiring special studies in zones encompassing potentially and recently active faults, preparation and adoption of seismic safety plan elements by cities and counties as required by California statute, and further development of a seismic zonation method. The method has four steps: postulating an earthquake of a given size and location; grouping geological materials with similar physical properties; predicting effects of the postulated earthquakes for each geologic unit by type of hazard of failure, namely surface rupture, ground shaking, flooding, liquefaction potential, and landsliding; and combining geologic effects by zones on the map (fig. 1). Examples of seismic zonation at various scales by cities and counties in the San Francisco Bay region show that scientific information can be used effectively in avoiding earthquake hazards and mitigating damage. Six examples were presented at the Second International Conference on Microzonation in 1978 and reprinted in a Survey Circular on the progress on seismic zonation. The method has been used in California by the cities of Mountain View, Novator, and San Francisco and the counties of Marin, Santa Clara, and San Mateo to develop zones which were used as a basis for their general plans, seismic safety plans, development policies or odrinances. Two of these examples, a city and a county, are described here.

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USGS1978

Development of a technique for the rapid estimation of earthquake losses

A simple, general technique has been outlined for the rapid, approximate estimation of building losses resulting from ground shaking during earthquakes. The technique has been applied to the San Francisco Bay area. Ground shaking, ground failures of various kinds, surface faulting, tsunamis, and earthquake induced fires are all responsible for earthquake building losses. Only losses associated with ground shaking are considered in this report for a number of reasons. Losses associated with various types of ground failure such as landsliding and liquefaction are difficult to estimate because the conditions necessary for these effects to occur are not completely understood and/or may be difficult to identify. Losses related to surface faulting are believed to be small as a proportion of total losses (Algermissen and others, 1972), and losses related to tsunamis have been quite rare along the central California coast. Well-established methods are available for estimating fire losses, but these losses are beyond the scope of this report.

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