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Research about Sacramento-San Joaquin River Delta, San Francisco Bay

Source-linked reports with geographic coverage including Sacramento-San Joaquin River Delta, San Francisco Bay.

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Identifying conditions associated with outliers produced by three different chlorophyll fluorometers: A comparison of instrumentation and development of correction formulae

Measurements of chlorophyll concentration reported by fluorometers (fChl) are used in environmental research and monitoring, as inputs to models, and in the interpretation of remote sensing data. Researchers and managers benefit from understanding how to interpret and ensure the accuracy of fChl data collected by in situ fluorometers. Although fChl values produced by different manufacturers are often in agreement with discrete laboratory-derived Chlorophyll a (Chl a ) concentration measurements, there are instances in which results significantly differ. Further, when measuring fChl side by side, different fluorometers may report values that differ significantly from each other, despite passing calibration checks prior to deployment. We compared environmental conditions and phytoplankton species composition associated with instances in which fChl measurements from three different fluorometers (EXO2 Total Algae Smart Sensor, YSI Inc./Xylem Inc., Yellow Springs, Ohio; FluoroProbe III, bbe Moldaenke GmbH, Kiel, Germany; WETStar, Sea-Bird Scientific, Bellevue, Washington) were significantly different from laboratory-derived Chl a concentrations. Results indicated that elevated primary productivity, as indicated by high pH, dissolved oxygen, and the ratio of Chl a to phaeophytin, were correlated with underestimated fChl values recorded by each sensor. After removing outliers, we determined unique correction guidance for each of the three sensors and demonstrated that after applying correction formulae, fChl measurements produced by each sensor became directly comparable.

California

Record-high specific conductance and water temperature in San Francisco Bay during water year 2015

The San Francisco estuary is commonly defined to include San Francisco Bay (bay) and the adjacent Sacramento–San Joaquin River Delta (delta). The U.S. Geological Survey (USGS) has operated a high-frequency (15-minute sampling interval) water-quality monitoring network in San Francisco Bay since the late 1980s (Buchanan and others, 2014). This network includes 19 stations at which sustained measurements have been made in the bay; currently, 8 stations are in operation (fig. 1). All eight stations are equipped with specific conductance (which can be related to salinity) and water-temperature sensors. Water quality in the bay constantly changes as ocean tides force seawater in and out of the bay, and river inflows—the most significant coming from the delta—vary on time scales ranging from those associated with storms to multiyear droughts. This monitoring network was designed to observe and characterize some of these changes in the bay across space and over time. The data demonstrate a high degree of variability in both specific conductance and temperature at time scales from tidal to annual and also reveal longer-term changes that are likely to influence overall environmental health in the bay. In water year (WY) 2015 (October 1, 2014, through September 30, 2015), as in the preceding water year (Downing-Kunz and others, 2015), the high-frequency measurements revealed record-high values of specific conductance and water temperature at several stations during a period of reduced freshwater inflow from the delta and other tributaries because of persistent, severe drought conditions in California. This report briefly summarizes observations for WY 2015 and compares them to previous years that had different levels of freshwater inflow.

California