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Research about North Santiam River

Source-linked reports with geographic coverage including North Santiam River.

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Evaluating the potential to quantify salmon habitat via UAS-based particle image velocimetry

Continuous, high-resolution data for characterizing freshwater habitat conditions can support successful management of endangered salmonids. Uncrewed aircraft systems (UAS) make acquiring such fine-scale data along river channels more feasible, but workflows for quantifying reach-scale salmon habitats are lacking. We evaluated the potential for UAS-based mapping of hydraulic habitats using spectrally based depth retrieval and particle image velocimetry (PIV) by comparing these methods to a more well-established flow modeling approach. Our results indicated that estimates of water depth, depth-averaged velocity, and flow direction derived via remote sensing and modeling techniques were comparable and in good agreement with field measurements. Predictions of spring-run Chinook salmon ( Oncorhynchus tshawytscha ) juvenile rearing habitat produced from PIV and model output were similar, with small errors relative to direct field observations. Estimates of hydraulic heterogeneity based on kinetic energy gradients in the flow field were generally consistent between PIV and flow modeling, but errors relative to field measurements were larger. PIV results were sensitive to the velocity index ( α ) used to convert surface velocities to depth-averaged velocities. Sun glint precluded PIV analysis along the margins of some images and a large degree of overlap between frames was thus required to obtain continuous coverage of the reach. Similarly, shadows cast by riparian vegetation caused gaps in spectrally based bathymetric maps. Despite these limitations, our results suggest that for sites with sufficient water surface texture, UAS-based PIV can provide detailed hydraulic habitat information at the reach scale, with accuracies comparable to traditional field methods and multidimensional flow modeling.

Oregon

Scope of the cortisol stress response in Chinook salmon during maturation

In semelparous Pacific salmon, increased cortisol levels accompany sexual maturation and may be related to the rapid senescence and death that occur after spawning. In fish with extremely high cortisol, pre-spawning mortality is more likely. This may be because elevated cortisol is accompanied by energy depletion and reduces the immune capacity of sexually maturing individuals, thus increasing their susceptibility to parasites and pathogens. Several studies have measured cortisol levels in Pacific salmon during the last few weeks prior to spawning, but there is a lack of information regarding longer-term changes in resting and stressed cortisol levels of migrating adult Pacific salmon. A better understanding of the scope of the cortisol response during sexual maturation could contribute to understanding the extremely high pre-spawning mortality experienced by some threatened populations of Pacific salmon. The objective of this study was to determine the scope of the cortisol stress response in spring Chinook salmon as well as the dynamics of resting cortisol during maturation. We conducted a laboratory experiment in which plasma cortisol in adult Chinook salmon was measured before and after application of a standardized stressor applied at monthly intervals during the last three months prior to spawning. We found that resting and stressed cortisol levels increased during the last three months prior to spawning. We also found that sexually maturing Chinook salmon are able to mount a cortisol response to acute stressors when resting levels are elevated during maturation. Additionally, the effects of stress and time on cortisol dynamics differed between males and females as well as between individuals, which has implications for population resilience to anthropogenic stressors in wild populations.

Oregon