Geology Reports⌕ Search

Geology topics

Research about Long Island

Source-linked reports with geographic coverage including Long Island.

At least 19 recordsLinked to original sources

Modeling legacy nitrogen transport under instantaneous, steady-state, and transient groundwater flow conditions

In hydrologic settings where groundwater discharge contributes substantially to surface waters, legacy nitrogen in groundwater can confound surface water nitrogen loads estimated exclusively from current terrestrial sources. Additionally, legacy nitrogen in groundwater can contribute to lagged responses to nitrogen management efforts. Some methods of estimating groundwater contributions to surface water nitrogen loads account for legacy nitrogen, while others do not. The resulting differences are rarely quantified. We used a numerical modeling framework to compare three methods of estimating time-varying annual groundwater nitrogen loads to surface water receptors on eastern Long Island, New York. The instantaneous load method used steady-state contributing areas and includes no temporal groundwater lag. The second method used numerical simulations of nitrogen loads under steady-state flow, which captures groundwater transport lags but omits the annual variability in transient hydrologic stresses. The third method numerically simulated both transient groundwater flow and nitrogen transport to explicitly capture the effects of legacy nitrogen in groundwater. Depending on antecedent nitrogen and hydrologic conditions, historical nitrogen loads estimated from the numerical simulations were sometimes similar (<10% difference) and other times substantially different (±100%) from the instantaneous load estimates. Additionally, simulated future surface water nitrogen loads responded asymptotically over several decades following reductions in terrestrial nitrogen sources, further highlighting the effect of groundwater transport lag times. The comparison of the three methods, quantification of historical interannual variability, and prediction of lagged responses to nitrogen source reductions provide important context for decision makers using estimated groundwater nitrogen loads to help evaluate nitrogen management efficacy.

New York↗

Simulation of groundwater flow in the Long Island, New York regional aquifer system for pumping and recharge conditions from 1900 to 2019

The U.S. Geological Survey has developed a transient, groundwater-flow model that simulates hydrologic conditions in the Long Island aquifer system as part of an ongoing (since 2016) multiyear, cooperative investigation with the New York State Department of Environmental Conservation. The goals of this investigation are to assist stakeholders and resource managers to evaluate the response of the hydrologic system to changes in future hydraulic stresses. Responses in the hydrologic system include changes in water levels in the hydrogeologic units; discharge to streams, coastal waters, and subsurface infrastructure; and the extent of saline groundwater in the aquifers. Hydraulic stresses include future water-supply management and changes in land use and infrastructure. The numerical model synthesizes a diverse set of physiographic, geologic, climatic, land-use, and historical population, water use, and infrastructure data to physically represent the Long Island aquifer system from land surface to bedrock and to simulate annual hydrologic conditions between 1900 and 2019. A three-dimensional hydrogeologic framework was developed from existing and recently collected borehole geologic and geophysical data collected as part of a companion drilling program. Water-transmitting properties of the principal aquifer sediments were defined in three dimensions from new and existing lithologic logs. The distribution of recharge from precipitation was estimated from landscape characteristics and climate data. Anthropogenic recharge from wastewater, leaky infrastructure, and storm runoff were estimated from population, infrastructure, and pumping data. Water-use data, including well locations, depths, and pumping rates, were obtained from historical sources and records and used to estimate pumping stresses continuously in time and space, at an annual average time scale. The data were incorporated into a three-dimensional numerical model using the U.S. Geological Survey finite difference modeling code MODFLOW 6; the model encompassed all of Long Island and surrounding surface waters and simulated historical hydrologic conditions from 1900 to 2019. The calibration process involved trial and error adjustments using prior knowledge to improve general fit to observations followed by an inverse calibration to update and optimize input parameters, using an iterative ensemble smoother algorithm implemented in PEST++ version 5.0. This resulted in a model that generally was in good agreement with observed, dynamically varying hydrologic conditions from 1900 to 2019. The calibrated model was used to develop two base-case models for scenario testing of future, hypothetical conditions where one represented average-annual conditions, and one represented average-seasonal conditions from 2010 to 2019. The model representing average-annual conditions was modified further to represent an alternate sea-level position of 6 feet above the North American Vertical Datum of 1988, and the model representing average-seasonal conditions was modified to represent the average seasonal effects of a 5-year drought imposed upon current hydrologic conditions. Recharge is the sole source of water to the aquifer system; groundwater discharges to coastal water and streams and is withdrawn by pumped wells. Model-estimated annual recharge ranged from about 11 inches in 1965 to 41 inches in 1983. On average, from 2010 to 2019, about 23 percent of water was pumped from wells, and about 47 and 27 percent discharged to coastal waters and streams, respectively; the remaining 4 percent was water that moved into storage in the aquifer matrix. Water levels on Long Island vary naturally during time in response to changes in recharge; the amount of variation is largest in the interior of the island, in areas with highest water table altitudes near groundwater divides and lowest near streams and the coastal waters. The total range of water table altitudes on Long Island between 1900 and 2019 ranged from near 0 to more than 70 feet in western parts of Long Island. The largest range in altitudes is in New York City and is associated with areas of large historical withdrawals between the 1920s and the late 1980s. Water table altitudes generally varied by less than 10 feet in eastern Suffolk County, where the aquifer is under more natural conditions. Saltwater intrusion is of great concern on Long Island, particularly in western Long Island where both the unconfined and confined parts of the aquifer system have been intruded in response to large-scale groundwater withdrawals; however, the volume of freshwater in the islandwide aquifer system only has changed by about 5 percent between 1900 and 2019. The decadal change in the freshwater volume was largest during the early and mid-20th century, corresponding to the largest historical pumping, but that volume change did not exceed 1 percent. The negligible change in freshwater volume suggests that saltwater intrusion as of 2019 was limited at an islandwide scale but continues to occur in local areas of Queens and Nassau Counties, adversely affecting current water supplies and limiting future water supplies for affected communities. The regional groundwater model developed for this investigation is a tool that can be used to help determine the viability of current and future water supplies at a regional scale and can be used to support development of additional models at finer scale to support more focused assessments of groundwater sustainability.

New York↗

Hydrogeologic framework and extent of saltwater intrusion in Kings, Queens, and Nassau Counties, Long Island, New York

In 2016, the U.S. Geological Survey began a multiyear cooperative study with the New York State Department of Environmental Conservation to evaluate the sustainability of Long Island’s sole-source aquifer system through hydrogeologic mapping, compilation of groundwater chloride concentrations, and groundwater flow modeling. In the initial phase of the islandwide study, the hydrogeologic framework and extent of saltwater intrusion in aquifers in Kings, Queens, and Nassau Counties on western Long Island, N.Y., were investigated. The aquifer system underlying western Long Island has been under stress from pumping of public, irrigation (golf course), and industrial supply wells. Saltwater intrusion has occurred from surrounding embayments (East River, Long Island Sound, Jamaica Bay, and the Atlantic Ocean) due to pumping. Eighteen boreholes were drilled and cores taken during 2019–21 to collect hydrogeologic, geochemical, and geophysical data to delineate the complex subsurface hydrogeology and extent of saltwater intrusion within the study area. Evaluation of the new cores, reexamination of legacy core descriptions, and analysis of borehole geophysical logs was used to refine the previously published hydrogeologic framework of Pleistocene and Cretaceous unconsolidated sediments in the area, including delineation of a previously undefined hydrogeologic unit between the Magothy aquifer and the Raritan confining unit, herein named the “upper Raritan aquifer.” The upper Raritan aquifer was first recognized in southeastern Nassau County from an analysis of about 50 closely spaced boreholes with high-resolution core descriptions and gamma-ray (gamma) logs. Further analysis of borehole logs across the study area indicated that the upper Raritan aquifer was also present in Kings and Queens Counties. Nuclear magnetic resonance (NMR) logging was used for the first time on Long Island to provide estimates of the hydraulic properties of the major aquifer and confining units. Unlike other geophysical logs that record responses to the rock matrix and fluid properties and are strongly dependent on mineralogy, NMR logs record responses to the presence of hydrogen protons in the formation fluid to determine water fraction and pore-size distribution. NMR log analysis provided estimates of the clay-bound, capillary-bound, and mobile water fractions and hydraulic conductivity of aquifers and confining units penetrated by five wells in Nassau County. Pumpage for public-supply and industrial wells on Long Island began in the 1870s with small, localized suppliers of populated areas in Kings and Queens Counties. By 1904–16, pumpage for public water supply in Kings County averaged 21 million gallons per day, and averaged 37 million gallons per day in Queens County, mostly from the upper glacial aquifer. Saltwater intrusion was reported as early as the beginning of the 20th century and included the upper glacial-Jameco-Magothy and Lloyd-North Shore aquifer systems. By 1936, pumping in central Kings County created a major cone of depression in the water table extending to the south shore of much of Kings County and into southwestern Queens County. Saltwater intrusion has caused the shutdown of public-supply wells in Kings, Queens, and Nassau Counties. A large saltwater intrusion wedge in the Lloyd aquifer was indicated in southern Queens County in the early part of the 20th century, and the saltwater interface may have been onshore predevelopment. Most of Kings and Queens Counties are intruded with saltwater in both the upper glacial-Jameco-Magothy and Lloyd-North Shore aquifers systems. Saltwater increased during the 20th century and continues to increase to the present (2023) in the Lloyd-North Shore aquifer system in Great Neck and Manhasset Neck in northern Nassau County. A major wedge of saltwater intrusion in the upper glacial-Jameco-Magothy aquifer in southwestern Nassau County appears to be increasing.

New York↗

Nitrogen load estimates from six nonpoint sources on Long Island, New York, from 1900 to 2019

Estimates of nitrogen loading from nonpoint sources on Long Island, New York, at or just below the land surface, are essential for assessing the current and future effects of nitrogen on the island’s drinking water and fresh and marine surface receiving waters. Annual estimates of nitrogen loading for the 120 years from 1900 to 2019 for major nonpoint nitrogen sources—septic systems, residential fertilizer, agricultural fertilizer, livestock waste, pet waste, and atmospheric deposition—were made by using a geographic information system to analyze, visualize, and process data sources, and format output data. This analysis provided spatial and temporal estimates of nitrogen loading derived from each nonpoint source at a 500- by 500-foot gridded resolution and represents the total mass of nitrogen applied on, or just below, the land surface annually from 1900 to 2019. These mass estimates are considered unattenuated as they do not reflect the various mechanisms of nitrogen loss, such as plant uptake, overland runoff, and chemical transformations in the soil and unsaturated zones that likely reduce the amount of nitrogen that reaches the water table. Island-wide and countywide summaries of the estimated nitrogen loading were analyzed to describe the long-term average nitrogen totals and the contributions from the six nonpoint sources. The island-wide average annual nitrogen load from 1900 to 2019 was 14.92 million kilograms (Mkg) nitrogen, which represents the aggregate of individual contributions from septic systems (4.15 Mkg), residential fertilizer (3.28 Mkg), agricultural fertilizer (3.19 Mkg), livestock waste (1.22 Mkg), pet waste (0.98 Mkg), and atmospheric deposition (2.10 Mkg). The island-wide average annual nitrogen load, normalized by area, was 4,100 kilograms nitrogen per square kilometer (kg N/km 2 ), which represents the aggregate of individual contributions from septic systems (1,100 kg N/km 2 ), residential fertilizer (910 kg N/km 2 ), agricultural fertilizer (880 kg N/km 2 ), livestock waste (340 kg N/km 2 ), pet waste (270 kg N/km 2 ), and atmospheric deposition (580 kg N/km 2 ).

New York↗

Preliminary machine learning models of manganese and 1,4-dioxane in groundwater on Long Island, New York

Manganese and 1,4-dioxane in groundwater underlying Long Island, New York, were modeled with machine learning methods to demonstrate the use of these methods for mapping contaminants in groundwater in the Long Island aquifer system. XGBoost, a gradient boosted, ensemble tree method, was applied to data from 910 wells for manganese and 553 wells for 1,4-dioxane. Explanatory variables included soil properties, groundwater flow, land use, and other features that describe the hydrogeology and geochemistry of the aquifer system. Four models were developed to predict the probability of manganese concentrations greater than a detection level of 10 micrograms per liter (μg/L) and greater than three threshold concentrations (50, 150, and 300 μg/L) relevant to drinking-water quality. One model was developed to predict the probability of 1,4-dioxane concentrations greater than a detection level of 0.07 μg/L. The 1,4-dioxane model was limited geographically to Suffolk County because of data availability. Predictions were made for two layers in the upper glacial aquifer and three layers in the Magothy aquifer, which are the upper two of the three major aquifers of the Long Island aquifer system. The objective of the study described in this report was to demonstrate the application of the methods rather than to develop precise estimates of manganese or 1,4-dioxane concentrations at any given location. The predictive models developed in the study are considered preliminary in the sense that they are an initial effort at developing these kinds of models specifically for Long Island. The models could be improved by the inclusion of additional data, by the use of methods to improve the modeling of infrequent high concentrations of manganese and 1,4-dioxane (above threshold concentrations), and by including more explanatory variables that specifically describe conditions and contaminant sources on Long Island. Nonetheless, the distribution of model predictions and the influence of explanatory variables in the models were consistent with the expected relations between contaminant concentrations and groundwater-flow-system characteristics and the distribution of manmade sources. Mapped predictions indicated that manganese detections were more probable in the upper glacial aquifer and along the southern shore of Long Island, consistent with the distribution of anoxic conditions in groundwater in the Long Island aquifer system. Manganese was infrequently predicted at concentrations greater than thresholds of concern for drinking-water quality in any of the aquifer layers. Detections of 1,4-dioxane were predicted in the western, more highly developed parts of Suffolk County, in the upper glacial aquifer and the top and middle layers of the Magothy aquifer, and in northwestern Suffolk County in the bottom layer of the Magothy aquifer. Although preliminary in nature and based on limited data, these mapped predictions can be used to generally identify areas where manganese and 1,4-dioxane may be present at concentrations of concern to prioritize areas for future monitoring and to guide future modeling and mapping efforts.

New York↗

Adjusting design floods for urbanization across groundwater-dominated watersheds of Long Island, NY

The magnitude and variability of floods have increased for many nontidal streams on Long Island (LI), NY since the mid-20th century. One of the most densely populated regions of the United States, LI has experienced amplified floods in step with increases in impervious land cover, storm, and sanitary sewers that have accompanied urban development. To better understand the drivers of observed flood trends and effects of urbanization, a nonstationary flood frequency analysis is conducted, using historical annual peak flow records from 17 gaged watersheds on LI using conditional moments based on physical covariates from a two-stage sequential robust linear regression procedure. Regression results indicate that urban development and precipitation are significant co-predictors of peak flows for LI watersheds that have undergone rapid development during the available peak flow record. In watersheds with less intense urbanization or that were fully developed before the peak flow record began, precipitation alone was a significant explanatory variable. Long-term baseflow patterns identified using a nonparametric smoother explained some patterns of decreasing peak flows and heteroskedasticity in the peak flow records. Fitting a log-Pearson III distribution with these conditional moments, floods corresponding to a 20% annual exceedance probability (AEP) are up to 80% higher under a nonstationary framework compared with stationary under current watershed conditions, and differ significantly (95% confidence) from stationary estimates for 6 out of 17 watersheds. Larger floods corresponding to 1% AEPs do not differ significantly between nonstationary and stationary estimates at a 95% confidence level. Nonmonotonic trends observed in two watersheds indicate that recent stormwater management practices, such as rerouting stormwater outfalls away from the channel, substantially reduce flood frequency. Reduced nonstationary flood quantile estimates at these two watersheds are 20 to 40% lower than stationary estimates when accounting for changing watershed conditions over time. Across LI, stormwater management and water-table fluctuations have increased peak flow variability, characteristic of a late phase urban adjustment period on LI. Results of this study demonstrate that a nonstationary framework is a necessary step forward toward a regional flood-frequency analysis for LI. This nonstationary framework will allow flood managers to update flood discharge estimates to current conditions that reflect altered relationships between urban cover and climate for more targeted planning of flood control, transportation infrastructure, and management of floodplain ecosystems.

New York↗

Application of a soil-water-balance model to estimate annual groundwater recharge for Long Island, New York, 1900–2019

A soil-water-balance (SWB) model was developed for Long Island, New York, to estimate the potential amount of annual groundwater recharge to the Long Island aquifer system from 1900 to 2019. The SWB model program is a computer code based on a modified Thornthwaite-Mather SWB approach and uses spatially and temporally distributed meteorological, land-cover, and soil properties as input to compute potential daily groundwater recharge. Simulated outputs indicate that island-wide potential groundwater recharge trends, as a percentage of precipitation, have increased approximately 3 percent during the 120-year period. The simulated results account for both climatic and land-cover changes that have occurred during the period. A change from undeveloped (forested land cover) to low- and medium-density residential land cover or land use increased potential groundwater recharge because of a decrease in evapotranspiration. During the 30-year period from 1900 to 1930, the simulated potential average groundwater recharge rate on Long Island was estimated to be 18.50 inches per year (in/yr), or a total of 1,243 million gallons per day, during the 30-year period from 1985 to 2015, the simulated potential average groundwater recharge rate estimate increased to 20.73 in/yr (a total of around 1,393 million gallons per day). During the 1900–2019 simulation period, the potential average annual groundwater recharge rate was about 19.24 in/yr. The data for that period included values for a 3-year meteorological drought from 1963 to 1965, where the mean precipitation was about 26.5 percent lower than the long-term average of 46.7 in/yr, and the potential groundwater recharge rate was about 12.3 in/yr. During a 3-year wet period from 1982 to 1984, where mean precipitation was about 19.6 percent higher than the long-term average, the estimated potential groundwater recharge rate was about 26.8 in/yr.

New York↗

Using microbial source tracking to identify fecal contamination sources in Sag Harbor on Long Island, New York

The U.S. Geological Survey worked in cooperation with the New York State Department of Environmental Conservation to assess the potential sources of fecal contamination entering Sag Harbor, an embayment complex on the northern shore of the south fork of Suffolk County, Long Island, New York. Water samples are routinely collected by the New York State Department of Environmental Conservation in the harbor and analyzed for fecal coliform bacteria, an indicator of fecal contamination, to determine the need for closure of shellfish beds for harvest and consumption. Fecal coliform and other bacteria are an indicator of the potential presence of pathogenic (disease-causing) bacteria. However, indicator bacteria alone cannot determine the biological or geographical sources of contamination; therefore, microbial source tracking was implemented to determine various biological sources of contamination. In addition, information such as the location, weather and season, and surrounding land use where a sample was collected help determine the geographical source and conveyance of land-based water to the embayment. Analysis revealed that the most substantial source of fecal contamination to Sag Harbor was discharge from sites draining ponds and wetlands, particularly during the summer months. Fecal coliform bacteria at sites where ponds and wetlands drain are increased by stormwater runoff, which is another substantial source of fecal contamination. Human markers were detected in all four samples at the Sag Harbor Sewage Treatment Plant Outfall site but were associated with low fecal coliform concentrations, indicating that the sewage treatment plant is not a likely source of fecal contamination to the embayment. The Ligonee Brook Culvert, Paynes Creek near Marjorie Lane, and Otter Pond Culvert sites were identified as locations that contribute fecal contamination to Sag Harbor. These three locations had high fecal coliform bacteria concentrations in the summer, one of which was positive for canine microbial source tracking markers (Ligonee Brook Culvert), and another positive for waterfowl markers (Paynes Creek near Marjorie Lane). The absence of fecal coliform bacteria and human microbial source tracking markers in groundwater samples indicates that water from septic systems does not influence the harbor; however, elevated fecal coliform bacteria concentrations were not often detected. Further, the sandy sediment alongside Sag Harbor is unlikely to contribute fecal coliform bacteria when resuspended in the water column through tidal shifts or boat activity.

New York↗

Nuclear magnetic resonance logging of a deep test well for estimation of aquifer and confining-unit hydraulic properties, Long Island, New York

A 1,200-foot deep well in southwestern Nassau County, Long Island, N.Y. was selected to evaluate the application of a nuclear magnetic resonance (NMR) logging tool. Technological advances in NMR borehole systems have allowed for reduced probe length and diameter, and focused measurement at specific diameters beyond the disturbed zone surrounding a well. This 3-inch-diameter NMR tool was specifically developed for use in deep 4-inch-diameter polyvinyl chloride cased wells common to Long Island. Selected intervals of the Magothy and Lloyd aquifers and the Raritan confining unit were logged for the evaluation. Unlike other petrophysical logs that respond to the rock matrix and fluid properties and are strongly dependent on mineralogy, NMR logs respond to the presence of hydrogen protons in the formation fluid to determine water fraction and pore-size distribution. NMR log analysis provided estimates of the clay-bound, capillary-bound, and mobile water fraction and hydraulic conductivity of aquifers and confining units penetrated by the well. NMR-estimated porosity and mobile water fraction for the Magothy aquifer (0.34 and 0.22 respectively), Magothy/Raritan(?) (0.35 and 0.30), Raritan confining unit (0.30 and 0.13), Raritan clay and silt (0.23 and 0.01), and the Lloyd aquifer (0.27 and 0.19) was determined from the NMR log. Hydraulic conductivity was estimated from the NMR-log data using the Schlumberger- Doll Research and sum of squared echoes equations with empirically derived constants for unconsolidated aquifers. Average hydraulic conductivity of the Magothy aquifer was 70 ft/d, the Raritan confining unit was 9.0 ft/d overall, the clay-rich lower part 0.24 ft/d, and the Lloyd aquifer was 56 ft/d. The coarse sandy Magothy/Raritan(?) unit between the Magothy aquifer and the top of the Raritan confining unit had the highest hydraulic conductivity of 345 ft/d. The hydraulic-conductivity estimates from the NMR log analysis for the Magothy and Lloyd aquifers were consistent with published values and that estimated for the Lloyd aquifer from a specific-capacity test at the well site.

New York↗

Managing water resources on Long Island, New York, with integrated, multidisciplinary science

Nutrients, harmful algal blooms, and synthetic chemicals like per- and polyfluoroalkyl substances (PFAS) and 1,4-dioxane threaten Long Island’s water resources by affecting the quality of drinking water and ecologically sensitive habitats that support the diverse wildlife throughout the island. Understanding the occurrence, fate, and transport of these potentially harmful chemicals is critical to protect these vital resources. The U.S. Geological Survey (USGS) is collecting and analyzing data to support informed water-resource management decisions. This fact sheet introduces ongoing efforts and future areas of study aimed to help water professionals develop a comprehensive science strategy to address contamination of the Long Island aquifer system, the sole source of drinking water for nearly 3 million people. These studies include surface and groundwater collection and groundwater flow modeling. Funding for the data collection has been provided by the USGS, New York State Department of Environmental Conservation, New York City Department of Environmental Protection, Suffolk County Water Authority, Nassau County Department of Public Works, State and local agencies, and Tribal and Federal partners. Without the foresight and long-term commitment of these funding partners, evaluating sustainability and planning for future water needs would not be possible.

New York↗

Optimization of salt marsh management at the Long Island National Wildlife Refuge Complex, New York, through use of structured decision making

Structured decision making is a systematic, transparent process for improving the quality of complex decisions by identifying measurable management objectives and feasible management actions; predicting the potential consequences of management actions relative to the stated objectives; and selecting a course of action that maximizes the total benefit achieved and balances tradeoffs among objectives. The U.S. Geological Survey, in cooperation with the U.S. Fish and Wildlife Service, applied an existing, regional framework for structured decision making to develop a prototype tool for optimizing tidal marsh management decisions at the Long Island National Wildlife Refuge Complex in New York. Refuge biologists, refuge managers, and research scientists identified multiple potential management actions to improve the ecological integrity of five marsh management units within the refuge complex and estimated the outcomes of each action in terms of performance metrics associated with each management objective. Value functions previously developed at the regional level were used to transform metric scores to a common utility scale, and utilities were summed to produce a single score representing the total management benefit that could be accrued from each potential management action. Constrained optimization was used to identify the set of management actions, one per marsh management unit, that could maximize total management benefits at different cost constraints at the refuge-complex scale. Results indicated that, for the objectives and actions considered here, total management benefits may increase consistently up to about $24,000 , but that further expenditures may yield diminishing return on investment. Potential management actions in optimal portfolios at total costs less than $24,000 consistently included approaches for increasing drainage from the marsh surface within the marsh management units. The potential management benefits were derived from expected improvements in surface-water drainage and capacity for marsh elevation to keep pace with sea-level rise, and presumed increases in numbers of spiders (as an indicator of trophic health) and tidal marsh obligate birds. The prototype presented here does not resolve management decisions; rather, it provides a framework for decision making at the Long Island National Wildlife Refuge Complex that can be updated as new data and information become available. Insights from this process may also be useful to inform future habitat management planning at the refuges.

New York↗

Overview and methodology for a study to identify fecal contamination sources using microbial source tracking in seven embayments on Long Island, New York

Between June 2018 and July 2019, the U.S. Geological Survey collaborated with the New York State Department of Environmental Conservation to analyze water quality in seven embayments on Long Island, New York, for a study to examine fecal contamination using microbial source tracking. This report documents the approach, methodology, and quality-assurance data used in the study. All samples and field data were collected in accordance with U.S. Geological Survey National Field Manual procedures. Samples were analyzed for host-specific deoxyribonucleic acid (DNA) markers, fecal coliform bacteria, inorganic and total organic nitrogen, and stable isotopes of nitrate and ammonium. Samples for quality control were collected for microbiological analyses at a rate of 1 per 20 environmental samples. A total of 14 blank and 15 replicate samples were collected for DNA markers, 52 sequential field replicates were analyzed by the Public Environmental Health Laboratory of the Suffolk County Department of Health Services and the New York State Department of Conservation Marine Laboratory for fecal coliform, and 7 blank and 7 replicate samples were collected to be analyzed for nutrients. Results from quality-control samples collected throughout the course of the study confirmed that sampling procedures were adequate and did not disqualify any data from analysis.

New York↗

Delineation of the freshwater-saltwater interface on southwestern Long Island, New York, through use of surface and borehole geophysical methods

The U.S. Geological Survey used surface and borehole geophysical methods to delineate the freshwater-saltwater interface in coastal plain aquifers along the southwestern part of Long Island, New York. Over pumping of groundwater in the early 20th century combined with freshwater-saltwater interfaces at the coastline created saltwater intrusion in the upper glacial, Jameco, Magothy, and Lloyd aquifers. Our research indicates extensive saltwater intrusion of the Lloyd aquifer along the southwestern coast of Long Island, N.Y. Several public-supply wells in the southern parts of Nassau, Queens, and Kings Counties have been adversely affected by saltwater intrusion causing several supply wells to be shut down and abandoned. In 2015–17, the U.S. Geological Survey collected time domain electromagnetic soundings at 12 locations and borehole electromagnetic induction conductivity logs at 9 outpost wells within the study area to delineate several saltwater intrusion wedges. Three separate wedges , (shallow, intermediate, and deep), of saltwater intrusion were delineated in the upper glacial, Jameco, and Magothy aquifer complex. In addition, reanalysis of geophysical logs collected in an open borehole of a test well in southern Queens County in 1989 revealed the Lloyd aquifer was nearly completely intruded by saltwater with an estimated chloride concentration of 15,000 milligrams per liter. This suggests the freshwater-saltwater interface was at the coastline and not miles offshore as theorized by previous studies.

New York↗

Simulation of groundwater flow in the regional aquifer system on Long Island, New York, for pumping and recharge conditions in 2005–15

A three-dimensional groundwater-flow model was developed for the aquifer system of Long Island, New York, to evaluate (1) responses of the hydrologic system to changes in natural and anthropogenic hydraulic stresses, (2) the subsurface distribution of groundwater age, and (3) the regional-scale distribution of groundwater travel times and the source of water to fresh surface waters and coastal receiving waters. The model also provides the groundwater flow components used to define model boundaries for possible inset models used for local-scale analyses. The three-dimensional, groundwater flow model developed for this investigation uses the numerical code MODFLOW–NWT to represent steady-state conditions for average groundwater pumping and aquifer recharge for 2005–15. The particle-tracking algorithm MODPATH, which simulates advective transport in the aquifer, was used to estimate groundwater age, delineate the areas at the water table that contribute recharge to coastal and freshwater bodies, and estimate total travel times of water from the water table to discharge locations. A three-dimensional, 1-meter (3.3-foot) topobathymetric model was used to determine land-surface altitudes for the island and seabed altitudes for the surrounding coastal waters. The mapped extents and surface altitudes of major geologic units were compiled and used to develop a three-dimensional hydrogeologic framework of the aquifer system, including aquifers and confining units. Lithologic data from deep boreholes and previous aquifer-test results were used to estimate the three-dimensional distribution of hydraulic conductivity in principal aquifers. Natural recharge from precipitation was estimated for 2005–15 using a modified Thornthwaite-Mather methodology as implemented in a soil-water balance model. Components of anthropogenic recharge—wastewater return flow, storm water inflow, and inflow from leaky infrastructure—also were estimated for 2005–15. Groundwater withdrawals for various sources, including public water supply, industrial, remediation, and agricultural, were compiled or estimated for the same period. These data were incorporated into the model development to represent the aquifer system geometry, boundaries, and initial hydraulic properties of the regional aquifers and confining units within the Long Island aquifer system. Average hydraulic conditions—water levels and streamflows—for 2005–15 were estimated using existing data from the U.S. Geological Survey National Water Information System database. Model inputs were adjusted to best match average hydrologic conditions using inverse methods as implemented in the parameter-estimating software PEST. The calibrated model was used to simulate average hydrologic conditions in the aquifer system for 2005–15. About 656 cubic feet per second of water was withdrawn on average annually for 2005–15 for water supply and an average of about 349 cubic feet per second of water recharged the aquifer annually from return flow and leaky infrastructure. Parts of New York City have drawdowns exceeding 25 feet, mostly because of urbanization and associated large decreases in recharge rates. Large areas in the western part of the island have drawdowns exceeding 10 feet, mostly from large groundwater withdrawals and sewering, which largely eliminates wastewater return flow. Water-table altitudes in eastern parts of the island increased by more than 2 feet in some areas as a result of wastewater return flow in unsewered areas and changes in land use. Changes in streamflows show a similar pattern as water-table altitudes. Streamflows generally decrease in western parts of the island where there are large drawdowns and increase in eastern parts of the island where water-table altitudes increase.

New York↗

Distribution of selected hydrogeologic characteristics of the upper glacial and Magothy aquifers, Long Island, New York

The Pleistocene- and Cretaceous-age sediments underlying Long Island, New York, compose an important sole-source aquifer system that is nearly 2,000 feet thick in some areas. Sediment characteristics of importance for water supply include water-transmitting properties—horizontal and vertical hydraulic conductivity—and the distribution of lignite, which provides an important control on oxygen-reduction (redox) conditions and water quality, in Cretaceous-age aquifers. Several decades of urbanization and the associated need to meet water demand have generated abundant data on the lithology of the aquifer sediments and the potential for an improved regional-scale understanding of this aquifer system. There is a range in the source and quality of the information, but large amounts of data, even of lesser quality, can yield insight into important aquifer characteristics. The distribution of the horizontal and vertical hydraulic conductivity and the probability of occurrence of lignite and clay in the aquifer were developed for this study from a database of drilling records and geophysical logs. Lithologic descriptions were categorized into a set of standardized codes, which in turn, were aggregated into a set of general codes for the Pleistocene-age upper glacial and Cretaceous-age Magothy aquifers. General values of hydraulic conductivity were assigned to each code from published estimates on Long Island and analogous hydrogeologic environments on Cape Cod, Massachusetts. A binary value of 1 or 0 was assigned to each coded interval to indicate the presence or absence of lignite or based on keywords in the lithologic descriptions. This information was assembled into a geographic information system database that was queried sequentially and used to develop gridded values of each aquifer characteristic by use of ordinary kriging for a set of grids, each representing 10-foot-thick planar slices for the entire vertical thickness of each aquifer. These sets of grids, taken as a whole, represent a quasi-three-dimensional representation of each aquifer characteristic in both the upper glacial and Magothy aquifers. The analysis of hydraulic conductivity shows patterns that generally reflect known depositional features of each unit and are consistent with the current understanding of the geology of the aquifers. Spatial patterns in the upper glacial aquifer show contrasts in estimated hydraulic conductivity: lower values occur in inland areas and likely are associated with glacial moraines; higher values generally occur to the south in association with glacial outwash. Higher values of hydraulic conductivity in the Magothy aquifer, which resulted from deltaic deposition, generally occur in the basal parts of the unit, are associated with channel-lag deposits and are found in parts of the aquifer known for large well yields. Lower values of hydraulic conductivity generally occur in middle parts of the aquifer associated with deposition in overbank and wetland environments. The probability of lignite occurrence is highest in this same vertical zone of the Magothy aquifer, consistent with deposition in wetland environments. The probability of lignite occurrence generally is highest along the southern shore of the island. Lignite occurrence generally is consistent with water-quality patterns; water quality in these same areas indicate chemically reducing conditions and redox-related iron biofouling commonly occurs.

New York↗

Use of time domain electromagnetic soundings and borehole electromagnetic induction logs to delineate the freshwater/saltwater interface on southwestern Long Island, New York, 2015–17

The U.S. Geological Survey, in cooperation with the New York State Department of Environmental Conservation, used surface and borehole geophysical methods to delineate the freshwater/saltwater interface in coastal plain aquifers along the southwestern part of Long Island, New York. Over pumping of groundwater in the early 20th century combined with freshwater/saltwater interfaces at the coastline created saltwater intrusion in the upper glacial, Jameco, Magothy, and Lloyd aquifers. This study documents, for the first time, extensive saltwater intrusion of the Lloyd aquifer along the southwestern coast of Long Island, N.Y. Several public-supply wells in the southern parts of Nassau, Queens, and Kings Counties have been adversely affected by saltwater intrusion causing supply wells to be shutdown and abandoned. Due to the ongoing groundwater pumping in southern Nassau County, the freshwater/saltwater interface requires delineation and monitoring for any inland movement. In 2015–17, the U.S. Geological Survey collected time domain electromagnetic soundings at 12 locations and borehole electromagnetic induction conductivity logs at 9 wells within the study area to delineate several saltwater intrusion wedges. The upper glacial, Jameco, and Magothy aquifers were grouped into one aquifer complex within the study area to simplify interpretations. The coastal plain sediments increase in thickness from west to east and north to south because of their regional dip toward the southeast. Three separate wedges, shallow, intermediate, and deep, of saltwater intrusion were delineated in the upper glacial, Jameco, and Magothy aquifer complex. In addition, analysis of geophysical logs collected in an open borehole of a test well in southern Queens County in 1989 revealed the Lloyd aquifer was nearly completely intruded by saltwater with an estimated chloride concentration of 15,000 milligrams per liter. The geophysical logs from this well provides, for the first time, definitive proof of saltwater intrusion of the Lloyd aquifer on Long Island’s south shore, suggesting the freshwater/saltwater interface was at the coastline and not miles offshore as theorized by previous studies.

New York↗

Pesticides and their degradates in groundwater reflect past use and current management strategies, Long Island, New York, USA

Long Island, New York, has a mix of urban/suburban to agricultural/horticultural land use and nearly 3 million residents that rely on a sole-source aquifer for drinking water. The analysis of shallow groundwater (<40 m below land surface) collected from 54 monitoring wells across Long Island detected 53 pesticides or pesticide degradates. Maximum concentrations for individual pesticides or pesticide degradates ranged from 3 to 368,000 ng/L. The highest concentrations and most frequent pesticide detections occurred in samples collected from the pesticide management (PM) network, set in an agricultural/horticultural area in eastern Long Island with coordinated pesticide management by state and local agencies. The other two networks (Suffolk and Nassau/Queens) were set in suburban and urban areas, respectively, and had less frequent detections and lower pesticide concentrations than the PM network. Pesticide detections and concentration patterns (herbicide, insecticide, or fungicide) differed among the three networks revealing broad differences in land use. The predominance of fungicides metalaxyl, 1 H -1,2,4-triazole (propiconazole/myclobutanil degradate), and 4-hydroxychlorothalonil (HCTL, chlorothalonil degradate) in samples from the PM network reflects their intensive use in agricultural settings. Total fungicide concentrations in the PM network ranged from <10 to >300,000 ng/L. The widespread detection of imidacloprid and triazine herbicides, simazine and atrazine, reveal a mixture of current and past use pesticides across the Long Island region. Low concentrations (<200 ng/L) of the triazines in the Suffolk and Nassau/Queens networks may reflect a change in land use and application. Acetanilide herbicides and aldicarb have been discontinued for 20 and 40 years, respectively, yet the concentrations of their degradates were among the highest observed in this study. Acetanilide (total concentrations up to 10,000 ng/L) and aldicarb degradates (up to 270 ng/L) are present in the PM network at much lower concentrations than previous Long Island studies and reflect changes in agricultural practices and pesticide management.

New York↗

Water for Long Island: Now and for the future

Do you ever wonder where your water comes from? If you live in Nassau or Suffolk County, the answer is, groundwater. Groundwater is water that started out as precipitation (rain and snow melt) and seeped into the ground. This seepage recharges the freshwater stored underground, in the spaces between the grains of sand and gravel in what are referred to as aquifers. Long Island has three primary aquifers—the upper glacial, Magothy, and Lloyd—which are part of the Long Island aquifer system. Currently [2019], this aquifer system contains about 50 trillion gallons of freshwater.

New York↗