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Research about Illinois

Source-linked reports with geographic coverage including Illinois.

At least 37 records · Page 2Linked to original sources

Multi-scale effects of behavioral movement deterrents on invasive carp metapopulations

Behavioral deterrents of among-pool movement represent a promising tool for controlling invasive fish populations. To date, much of the research in this area has been focused on the direct effectiveness of different methods of deterrence. However, the effect of these structures on populations in spatially complex habitats is unknown. We combine a metacommunity model with movement data of two invasive species (bighead carp and silver carp) in a large river to assess local and river-wide scale population outcomes of deterrent locations. We calculated (1) which potential deterrent locations are most effective at reducing the growth at the invasion front (2) the river-scale population effects at each location, and (3) what, if any, are the risks imposed by altering the current spatial dynamics. We found that the effects on the population dynamics at the invasion front varied with the location of deterrents, ranging from near zero to effects equal to the reduction in an individual’s movement across the deterrent. The river-scale population growth rate was slightly increased by all potential deterrent placements because the deterrents tended to concentrate more of the river-scale population into pools with the highest recruitment rates. The short-term, transient dynamics followed a strictly decreasing pattern after deterrent placement suggesting no additional short-term risk. These results suggest that deterrents can be an effective and low-risk intervention for the control of invasive carp, although the population level effect will depend on the interaction of the traits and behavior of the species with the physical character and spatial structure of the habitat.

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Simulation of groundwater and surface-water interaction and lake resiliency at Crystal Lake, City of Crystal Lake, Illinois

The U.S. Geological Survey, in cooperation with the City of Crystal Lake, Illinois, started a study to increase understanding of groundwater and surface-water interaction between the glacial aquifer and the city’s namesake lake, Crystal Lake, and the effect of higher and lower precipitation conditions on groundwater and lake levels. The results from this study could be used by the city and others to aid in lake management strategies. This report describes the hydrologic lake budget and each of the budget components, which are then used in the construction, calibration, and application of a regional groundwater flow model. The flow model is used to simulate the shallow groundwater flow system and the lake responses to increased and decreased precipitation under the current weir elevation and the proposed lowered weir elevation. Using the program groundwater flow analytic element model (GFLOW), a two-dimensional, steady-state model was constructed. The model was calibrated by matching target water levels and stream base flows by adjusting model input parameters. A sensitivity analysis was completed by adjusting the parameters within reasonable ranges and noting the magnitude of changes in model calibration targets. Potential effects of extended wet and dry periods (within historical ranges and published predicted ranges) were evaluated by adjusting precipitation, groundwater recharge, and discharge at Crystal Lake culvert outlet in the model and comparing the resulting simulated lake stage and water budgets to stages and water budgets from the calibrated model. Model results under average, wet, and dry conditions with a lowered weir of 1 foot at the Crystal Lake culvert outlet indicate minor changes in the simulated lake-water budgets and associated lake levels and groundwater elevation contours; however, simulations with an increased outflow at the Crystal Lake culvert outlet decreased the lake water levels by as much as 1.87 feet and also decreased the groundwater levels surrounding the lake by about 1–2 feet during average and wet conditions.

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Comparing maximum likelihood and Bayesian methods for fitting hidden Markov models to multi-state capture-recapture data of invasive carp in the Illinois River

Background Hidden Markov Models (HMMs) are often used to model multi-state capture-recapture data in ecology. However, a variety of HMM modeling approaches and software exist, including both maximum likelihood and Bayesian methods. The diversity of these methods obscures the underlying HMM and can exaggerate minor differences in parameterization. Methods In this paper, we describe a general framework for modelling multi-state capture-recapture data via HMMs using both maximum likelihood and Bayesian methods. We then apply an HMM to invasive silver carp telemetry data from the Illinois River and compare the results estimated by both methods. Results Our analysis demonstrates disadvantages of relying on a single approach and highlights insights obtained from implementing both methods together. While both methods often struggled to converge, our results show biologically informative priors for Bayesian methods and initial values for maximum likelihood methods can guide convergence toward realistic solutions. Incorporating prior knowledge of the system can successfully constrain estimation to biologically realistic movement and detection probabilities when dealing with sparse data. Conclusions Biologically unrealistic estimates may be a sign of poor model convergence. In contrast, consistent convergence behavior across approaches can increase the credibility of a model. Estimates of movement probabilities can strongly influence the predicted population dynamics of a system. Therefore, thoroughly assessing results from HMMs is important when evaluating potential management strategies, particularly for invasive species.

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Reduction of large vessel traffic improves water quality and alters fish habitat-use throughout a large river

Rivers are increasingly used as superhighways for the continental-scale transportation of freight goods, but the ecological impact of large vessel traffic on river ecosystems is difficult to study. Recently, the temporary maintenance closure of lock and dam systems on the Illinois Waterway (USA) brought commercial vessel traffic to a halt along the river's length, offering a rare opportunity to study the response of the ecosystem before, during, and after an extended pause of this persistent anthropogenic disturbance. We observed improvements in main- and side-channel water quality and a redistribution of fish habitat-use during a months-long, near-complete reduction of large vessel traffic. Over 3600 water quality and 1300 fish community samples indicate that large vessel traffic reduction coincided with a 33 % reduction in turbidity as well as increased use of sampling strata near vessel navigation corridors by sound-sensitive and rheophilic fishes. Gizzard shad ( Dorosoma cepedianum ), the most abundant species in the system, also expanded their use of these ‘impact’ areas. Though inland waterway transport is an economically- and climate-friendly alternative to trucking and rail for the shipment of freight, our data suggest that intense vessel traffic may have profound physical and biological impacts across a large river. Monitoring and mitigation of ecological impacts of the ongoing expansion of inland waterway transport around the world will be critical to balancing large rivers as both useful navigation corridors and functional ecosystems.

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Seasonally varying contributions of contemporaneous and lagged sources of instream total nitrogen and phosphorus load across the Illinois River basin

Quantifying nutrient sources in streams, their temporal and spatial variability, and drivers of that variability can support effective water resources management. Yet a lack of data and modeling capabilities has previously prevented comprehensive quantification across both space and time. Here a dynamic SPARROW (Spatially Referenced Regressions on Watershed attributes) model that accounts for a lagged delivery of nutrients to streams was developed and applied to simulate seasonal and source-specific total nitrogen (TN) and total phosphorus (TP) loads in streams across the Illinois River basin (IRB). Dynamic load predictions from 2000 through 2020 revealed that a third of the TN and a quarter of the TP instream load originated from non-point sources that were lagged in their delivery from land-application to streams by more than a season. This lagged mass was the largest overall TN source—which was estimated as a lagged expression of previous seasonal non-point sources including fertilizer, manure, atmospheric deposition and fixation, and urban land use. Treated wastewater effluent was the largest TP source exported from the basin, contributing 39 % of the TP load and 15 % of the TN load, and dominated the load in the upper Illinois River near Chicago. Loads in the lower river during this period, conversely, were attributed primarily to a mix of agricultural sources and their lagged fractions from headwater tributaries. Instream processes removed 10 % of the TN load while only 4 % of the TP load was removed during instream transport. With appropriate datasets, the models could be extended to other basins or time periods and used to forecast future seasonal nutrient loads.

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River control points for algal productivity revealed by transport analysis

Measurement of planktonic chlorophyll- a —a proxy for algal biomass—in rivers may represent local production or algae transported from upstream, confounding understanding of algal bloom development in flowing waters. We modeled 3 years of chlorophyll- a transport through a 394-km portion of the Illinois River and found that although algal biomass is longitudinally widespread, most net production occurs at river control points in the upper reaches (up to 3.7 Mg chlorophyll- a y −1 km −1 ). Up to 69% of the algal biomass in the upper river was a result of within-reach production, with the remainder recruited from headwaters and tributaries. High chlorophyll- a measured farther downstream was largely because of transport from source-area control points, with substantial net losses of algal biomass occurring in the lower river. Modeling the often-overlooked river transport component is necessary to characterize where, when, and why planktonic algae grow and predict how far and fast they move downstream.

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USGS invasive carp database management & integration support

Invasive carp tracking, monitoring, and contracted removal will continue throughout the Upper IWW system as part of an adaptive management effort to mitigate, control, and contain invasive carp. To help facilitate these actions, there is a need to compile and analyze data from the multitude of partner agencies that are collecting invasive carp-related data throughout the Illinois River system. These data are often in disparate formats, and integrating these data into a common format allows both researchers and managers to assess invasive carp monitoring, control, and removal efforts at several scales is necessary. Ensuring the interoperability of these data sets allows for their use in various analyses and modeling efforts. Implementing an interoperable data management framework also provides mechanisms for end users to find and use existing data. Integrating data for use in modeling and analysis furthers the MRWG partnership’s collective understanding of invasive carp life history, distribution, and movement and can be used to facilitate adaptive management actions (e.g., directing monitoring, sampling, and removal efforts; assessing invasive carp abundance to support modeling efforts; informing deployment of control actions). An effective data management strategy will streamline the database update process, providing partners with timely, well-organized, uniformly formatted data and analyses in support of informed decision-making processes.

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Predation of invasive silver carp by native largemouth bass is size-selective in the Illinois River

Silver carp ( Hypophthalmichthys molitrix ) are a nonnative, planktivorous, and highly invasive species of cyprinid located throughout the Mississippi River Basin. Although they co-occur with largemouth bass ( Micropterus nigricans ), an abundant native predatory fish, their predator–prey relationship is poorly understood. This potential relationship warrants investigation as largemouth bass are large-gaped predators capable of exhibiting top-down control on planktivorous fishes. The objectives of this study were to determine if largemouth bass consume juvenile silver carp, and if there was a relationship between length of largemouth bass and length of silver carp consumed. Largemouth bass were collected from the La Grange Pool of the Illinois River using 60 Hz-pulsed DC electrofishing and their diets were analyzed (n = 389, total length = 70–578 mm). Evidence of silver carp was present in 18% of diets of largemouth bass that consumed fish. Lengths of consumed silver carp were estimated from the dimensions of their recovered chewing pads or pharyngeal teeth in the stomachs of largemouth bass. A significant relationship between length of largemouth bass and length of silver carp consumed ( p < 0.001, F = 34.63, r 2 = 0.61) was observed. Estimated total lengths of silver carp were 34–101 mm and were recovered from diets of largemouth bass that were 94–262 mm total length. These results indicate enhancement of native largemouth bass populations is unlikely to substantially reduce silver carp populations in the Illinois River or in other waterways where these species co-occur.

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Statewide sampling to determine spatial distribution, prevalence, and occurrence of per- and polyfluoroalkyl substances (PFAS) in Illinois community water supplies, 2020–21

Per- and polyfluoroalkyl substances (PFAS) are a group of synthetic chemicals that have been manufactured and used globally since the 1940s. PFAS are used for their oil- and water-repellent properties, ability to reduce friction, and their flame-retardant nature. PFAS are widely used in a variety of products, including clothing, carpet, food packaging, and firefighting foam. The properties that make them useful in manufacturing, however, also make them persistent and mobile, causing potential exposures to the environment and humans. Known as “forever chemicals,” these compounds resist degradation and have been determined to bioaccumulate in humans and wildlife. The Illinois Environmental Protection Agency (IEPA) collected a total of 1,711 samples (includes quality-control samples) of finished water at 1,428 entry points from 1,017 Illinois community water supply (CWS) systems and analyzed the water samples for PFAS. The results following confirmation samples indicated a mean of 99 percent of all sample results were below the minimum reporting level (MRL) of 2 nanograms per liter (ng/L). Of the detections at or above the MRL, 7 of 18 PFAS were detected in 149 of 1,428 entry points (about 10 percent). Of the nearly 7.4 million residents directly served by the CWS systems sampled, more than 1.3 million residents (about 18 percent) are served by CWS systems that had at least one detection of PFAS above the MRL of 2 ng/L. The most frequently detected PFAS were perfluorobutanesulfonic acid (about 6.2 percent, 37 ng/L maximum concentration), perfluorooctanesulfonic acid (PFOS) (about 5.0 percent, 150 ng/L maximum concentration), and perfluorooctanoic acid (PFOA) (about 4.8 percent, 25 ng/L maximum concentration). Of the 1,428 entry point samples from the CWS systems, 149 samples had confirmed detections of PFAS, with 93 of those 149 (about 62 percent) samples having at least one PFAS with a concentration that exceeded the median detected concentration of 3.2 ng/L. The highest concentrations detected were 150 ng/L (PFOS) and 140 ng/L (perfluorohexanesulfonic acid) at one CWS location which has been shut down and a different source of water has been provided to the consumers. Although PFAS detections were more common in CWS systems using surface-water sources (about 35 percent, 30 of 85) and mixed sources (50 percent, 5 of 10) compared to those using groundwater sources (about 9 percent, 114 of 1,333), a greater range of PFAS concentrations were observed in groundwater CWS systems (2 to 150 ng/L) than in surface-water CWS systems (2 to 15 ng/L). Statistically significant differences were determined between some detected PFAS (PFOA, PFOS, and perfluorohexanoic acid) and the source of drinking water (groundwater, surface water, or mixed). This report summarizes the occurrence and spatial distribution of PFAS in CWS systems across Illinois. The results from this sampling effort could be used by Illinois public health officials to identify the potential risk of PFAS in drinking water to human health.

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An inconvenient trend: Decadal decline in ground height of swamps in Southern Illinois

An understanding of the long-term trends of ground height and sedimentation in a landscape context can provide a framework to better understand the impacts of agricultural development on floodplain processes. This study examined long-term changes in ground height using surface elevation tables (SETs) and sediment deposition measurements in the Cache River floodplains of Southern Illinois including Taxodium distichum swamps in Crawford Tract and Eagle Pond from 2019 to 2022 and in Deer Pond and Snake Hole from 2005 to 2022. The mean ground heights of these swamps decreased by a mean of −0.33, −033, −0.28 and −0.19 cm year −1 , respectively. Annual sediment deposition on feldspar markers in Crawford Tract was negligible from 2020 to 2022 (range of annual deposition depth: <0.1 to 0.4 cm). However, sediment deposition at Deer Pond and Snake Hole was higher from 2006 to 2021 (range of annual deposition depth: <0.1–2.5 and <1 to 2.0 cm, respectively). In some years, the sites appeared scoured, and the feldspar markers had disappeared. The loss of ground height in these swamps could be related to erosion, increased precipitation and/or downcutting of the channel following the construction of a major diversion to dewater the floodplain via the Post Creek Cutoff in the early 1900s. Despite the limitations of this study toward revealing specific mechanisms linking floodplain erosion to channel downcutting and the engineered features of this landscape, this study clearly showed that Cache floodplains have lost height in past decades with potential consequences for the conservation of natural forests.

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Incorporating metapopulation dynamics to inform invasive species management: Evaluating bighead and silver carp control strategies in the Illinois River

1. Invasive species management can benefit from predictive models that incorporate spatially explicit demographics and dispersal to guide resource allocation decisions. 2. We used invasive bigheaded carps ( Hypophthalmichthys spp.) in the Illinois River, USA as a case study to create a spatially explicit model to evaluate the allocation of future management efforts. Specifically, we compared additional harvest (e.g. near the invasion front vs. source populations) and enhanced movement deterrents to meet the management goal of reducing abundance at the invasion front. 3. We found additional harvest in lower river pools (i.e. targeting source populations) more effectively limited population sizes upriver at the invasion front compared to allocating the same harvest levels near the invasion front. Likewise, decreasing passage (i.e. lock and dam structures) at the farthest, feasible downriver location limited invasion front population size more than placing movement deterrents farther upriver. 4. Synthesis and applications. Our work highlights the benefits of adopting a multipronged approach for invasive species management, combining suppression of source populations with disrupting movement between source and sink populations thereby producing compounding benefits for control. Our results also demonstrate the importance of considering metapopulation dynamics for invasive species control programs when achieving long-term management goals.

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Nutrient and suspended-sediment concentrations, flux, and yields in the Galena River, Illinois, 2019–21

Two stations on the Galena River in Illinois were monitored for nitrogen, phosphorus, and suspended sediment from 2019 to 2021 to determine physiochemical properties and constituent concentrations, flux, and yields. This information could aide in the management and understanding of the Galena River and the contributions from the intervening 58-square-mile study area watershed. Constituent concentrations were characteristic for contemporary midwestern agricultural watersheds and did not display any notable high or low values. Concentrations of nitrogen were generally higher at the upstream station, whereas concentrations of phosphorus and suspended sediment were generally higher at the downstream station. Decreases in nutrient concentrations were observed at both stations during the study period, but there was no appreciable pattern in suspended-sediment concentrations. Constituent fluxes, particularly nitrogen, were higher at the downstream station, whereas fluxes of phosphorus and suspended sediment were higher at the upstream station during several high-flow events, indicating substantial contribution of particulate material upstream from the study area and potential sequestration within the study area reach of the Galena River. For all constituents, yields were typically higher at the upstream station during periods of increased streamflow and lower at the upstream station during periods of reduced streamflow. These data indicate that the constituent contributions are greater from within the study area than from the watershed upstream from the study area during periods of normal to low streamflow.

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Nutrient and suspended-sediment concentrations, loads, and yields in upper Macoupin Creek, Illinois, 2017–21

The U.S. Geological Survey, in cooperation with the Macoupin County Soil and Water Conservation District and the American Farmland Trust, undertook a monitoring effort from 2017 to 2021 in the upper Macoupin Creek watershed. The monitoring effort was to determine and characterize nitrogen, phosphorus, and suspended-sediment concentrations, loads, and yields for a 566.7 square kilometer area of the Macoupin Creek watershed at two locations on upper Macoupin Creek bracketing a segment of the watershed where increased implementation of conservation land-use practices was planned. Two monitoring stations were established, consisting of an upstream site (Macoupin Creek at Highway 108 near Carlinville, Illinois; U.S. Geological Survey streamgage 05586647) and a downstream site (Macoupin Creek at Highway 111 near Summerville, Ill.; U.S. Geological Survey streamgage 05586745). Data collected at these stations included continuous stream discharge and periodic samples for nutrients and suspended sediment. A Weighted Regressions on Time, Discharge, and Season–Kalman model was implemented to estimate daily concentrations for nitrate plus nitrite, total phosphorus, and suspended sediment for both monitoring stations. These daily concentrations were used in conjunction with the continuous stream discharge data to derive estimates of constituent flux, loads, and yields. During the study period, the study area subbasin of the upper Macoupin Creek watershed reduced downstream nitrate and total phosphorus cummulative yields by approximately 54 and 21 percent, respectively; however, the cummulative yield of suspended sediment increased by approximately 10 percent from inputs within the study area. These data indicate that nitrate and phosphorus transport is greater from the upstream subbasin and being diluted in the combined subbasin by lower transport from the study area, whereas suspended sediment is being contributed from the study area reach, presumably through surface runoff and streambank and streambed erosion.

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Influence of camera model and alignment on the performance of paired camera stations

The probability of obtaining images of target species may vary across camera models or relative position of cameras at survey locations. Alignment of cameras within paired camera stations (hereafter, stations) could affect species detection due to issues with image exposure. We quantified effects of 3 camera models and alignment (staggered, offset by a perpendicular distance of 4.6 m, and aligned, directly facing one another) on camera performance in a station design. Mean exposure events (flash from one camera overexposes or underexposes pictures) at aligned stations was 3.93 (SE = 1.01; n = 40), whereas no exposure events were documented at staggered ( n = 36) stations. Overall frequency of exposure events of mammal images at aligned cameras was 44% (68 exposure events/153 images). On average, 8% (range 0−35%) of mammal images from aligned stations were exposure events. We detected no difference ( P = 0.88) in exposure events among paired camera models. Further, we detected no overall differences ( P ≥ 0.07) in paired camera performance (i.e., number of mammal images over survey interval) between aligned or staggered stations, though reliability (i.e., percentage of camera stations that lasted entire survey interval) varied ( P ≤ 0.001) between model types. Research deploying 2 cameras within a camera station framework can eliminate exposure events by using a staggered camera alignment without affecting the number of usable mammal photos. Rigorous field testing prior to deployment of stations is warranted to optimize reliability. One of our low-cost models performed as well as a more expensive model within our paired camera stations at collecting mammal images, and thus could be incorporated into study designs without compromising quality of camera photo data. We suggest a pilot study before large-scale deployment to evaluate reliability and performance of cameras, particularly when deploying multiple models.

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Decadal shifts in the population growth, regeneration, and health of Taxodium distichum in swamps of the Cache River Watershed, Illinois

Population projection models based on long-term trends in regeneration and tree survival can be used to predict the future stability of swamp forest species using water management. Population growth and regeneration of a foundational tree species in North American cypress swamps ( Taxodium distichum ) were compared in the Cache River watershed of southern Illinois USA over several decades. This study examined T. distichum population growth in several regional swamps within the Cache River watershed along a moisture gradient to model growth, stability, or decline based on data of life history stage transitions, using data from the following time periods: the 1990s, 2002–2011, and 2012–2022. Using data from the 1990s, T. distichum populations in Crawford Tract in Buttonland Swamp were projected to increase over time because of the high frequency of juvenile stages at elevations with growing season drawdown and winter flooding. The situation in Crawford Tract had changed by 2019–2021 because T. distichum seedlings had not transitioned (i.e., saplings and young trees were absent) although no old-growth trees had died during or after the 1990s. In other regional swamps, projection models were constructed over two decades (2006–2021) along a dry-to-wet flood gradient including Section 8 Woods, Deer Pond, Wildcat Bluff, Snake Hole, and Heron Pond. Populations in swamps on the drier end of the gradient had more support from juvenile stages. In a tree health survey in 2022 within the impounded interior of Buttonland Swamp (not Crawford Tract), seventy percent of the old-growth T. distichum trees were stressed or declining. Coupled with the fact that no seedlings or saplings were observed, the populations in the interior of the swamp were not stable. Many factors could further stress these ancient T. distichum including interactions of impoundment with chemicals, disease, and changes in air temperature and precipitation. Overall, the seedling abundance in these swamps increased in these environments from 2012 to 2021, except in the most flooded swamps. From a management perspective, drier conditions were more conducive to the success of the earlier life history stages of T. distichum in these old-growth forests.

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Application of electricity and underwater acoustics to clear fish from a navigation lock during maintenance

The presence of fish within navigation locks can introduce an environmental challenge for construction crews when maintenance is required. This study examined the effectiveness of a dual-deterrent fish herding technique using electricity and acoustic stimuli to reduce the abundance of fish within a navigation lock before a scheduled dewatering for maintenance. Fixed-location multi-beam imaging sonar was used to evaluate fish per minute (FPM) detections near the lock entrance before, during, and after the herding effort. Standardized mobile side-scan sonar surveys were also conducted before and after the herding to examine fish presence throughout the entire lock. Collectively, a 73% reduction in fish targets detected by side-scan sonar and a 43% reduction in FPM detected by imaging sonar were observed following the herding technique. Post-fish herding, 88% reduction in FPM >400mm and a 35% reduction in FPM <400mm were observed. Fish abundance within the lock chamber was reduced and did not result in construction delays, which was problematic and costly during previous dewatering events. Since data from this study are limited to a single lock dewatering and fish clearing event, caution should be taken with the extrapolation of these results. However, the applied methods show promise and may inform future fish clearing efforts to aid lock maintenance.

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Stable isotope constraints on the source of ore fluids for the Hicks Dome REE+Y-HFSE-fluorspar deposit

Hicks Dome is comprised of coarse crystalline Mississippi Valley Type deposits at shallow levels and an enigmatic, fine-grained fluorite, rare earth elements, Y, high field strength elements, Be, and Ba rich deposit at deeper levels. Phyllosilicates from a lamprophyre dike and a breccia from two Hicks Dome drill cores were sampled to resolve the fluid history of the entire deposit using light stable isotopes. Silicate fluorination coupled with isotope ratio mass spectrometry give δ18O values from +6.9 to +16.0 ‰ (Vienna Standard Mean Ocean Water). Temperature conversion elemental analyzer and gas chromatography-isotope ratio mass spectrometry give δ2H values from -54 to -33 ‰ (Vienna Standard Mean Ocean Water). Muscovite from metasomatized dikes and breccias are relatively enriched in 18O compared to phlogopite from lamprophyre. Calculated isotopic compositions of the fluids from which the phyllosilicates precipitated indicate that phlogopite retained a magmatic composition while muscovite likely formed from magmatic fluids that exchanged with carbonate host rocks or from magmatic fluids that mixed with basinal brines. Enrichment of deuterium in fluids calculated from muscovite suggest that fluids were derived from hypothesized carbonatites or were acidic. These data demonstrate that the Hicks Dome critical mineral resource is magmatic hydrothermal in origin.

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