Geology Reports⌕ Search

Geology topics

Research about Baja California

Source-linked reports with geographic coverage including Baja California.

At least 19 recordsLinked to original sources

Black rails in Baja California

Summarizing records from 1905 to 2025, we document the presence and distribution of the California black rail ( Laterallus jamaicensis coturniculus ) in northwestern México, particularly Baja California and the Colorado River Delta. This subspecies has a restricted distribution in the western U.S. and northwestern México. We found few records over the past century: sparse detections in the early 1900s and an increase in reported records after 2000. Over 120 years, we compiled 35 documented records of California black rail occurrence in Baja California with a minimum reported count of 56 rails. Our call-broadcast survey methods reconfirmed previously occupied sites and documented the species at a previously unreported site. Surveys in the Baja California portion of the Colorado River Delta yielded 20 detections across nine survey events between 2000 and 2022. In April 2003, standardized surveys detected 12 California black rails: 7 in Bahía de San Quintín, 3 in Arroyo San Telmo, and 2 in Arroyo El Rosario. Our recent survey work (2022–2025) recorded maximum monthly counts of 31 detections at Bahía de San Quintín and 15 detections at Estero de Punta Banda, the latter representing a previously undocumented location for the subspecies. These surveys also yielded the first photographic and acoustic documentation of California black rail in México. The contribution of spatial and temporal data provided by citizen science platforms increased our understanding of the subspecies’ distribution. Enforceable protection of this subspecies’ habitat is needed to safeguard its persistence.

Baja California↗

A 40,000-year packrat midden series from Cataviña, central Baja California, Mexico

Thirty packrat ( Neotoma spp.) middens collected from boulder fields near Cataviña, Baja California, Mexico, at 640–680 m elevation provide the first long chronology of macrofossils and pollen spanning the late Quaternary in the Central Desert of Baja California. Midden plant macrofossil and pollen assemblages document a rich chaparral/woodland assemblage during the last glacial and early Holocene dominated by Parry pinyon ( Pinus quadrifolia ) and California juniper ( Juniperus californica ) until 11,630 cal yr BP. This indicates chaparral/woodland had a much more extensive distribution in what are now desert elevations in northern and central Baja California. In contrast to late glacial and early Holocene midden records from northeastern Baja, the Cataviña middens of the same age lack plants adapted to warm season precipitation, suggesting that decreased temperatures and evapotranspiration during the growing season and enhanced winter precipitation, with little contribution from summer rains, supported the lowering of chaparral/woodland species distributions in central Baja California. Cataviña middens also record endemic desert plant taxa mixed in with chaparral/woodland species during the Pleistocene, persisting throughout the Holocene, followed by the quick arrival of other desert species after ∼11,000 cal yr BP. Baja California remains a high-potential yet poorly sampled area for packrat midden research in North America.

Baja California↗

The Southwestern Pond Turtle (Actinemys pallida) in Baja California, Mexico: New localities and persistent threats

The Southwestern Pond Turtle ( Actinemys pallida ), the only native freshwater turtle in Baja California, is experiencing alarming population declines, echoing global patterns observed in freshwater turtles. We conducted comprehensive field surveys across the major drainages of northwestern Baja California to delineate the species' current distribution, identify critical threats to its persistence, and provide guidance for conservation actions. We documented the continued presence of A. pallida at 27 sites across 10 watersheds, ranging from sea level to 1,525 m in elevation. These include nine historically known sites and 18 newly recorded localities. The most pervasive threats we identified were habitat degradation, the proliferation of invasive aquatic species, and unsustainable water extraction. Despite these pressures, our findings confirm that A. pallida still occupies much of its historical range. However, urgent ecological research is needed to inform evidence-based strategies that ensure the long-term viability of this imperiled species.

Baja California↗

Predicting the response of a long-distance migrant to changing environmental conditions in winter

Access to high-quality food is critical for long-distance migrants to provide energy for migration and arrival at breeding grounds in good condition. We studied effects of changing abundance and availability of a marine food, common eelgrass ( Zostera marina L.), on an arctic-breeding, migratory goose, black brant ( Brant bernicla nigricans Lawrence 1846), at a key non-breeding site, Bahía San Quintín, Mexico. Eelgrass, the primary food of brant, is consumed when exposed by the tide or within reach from the water's surface. Using an individual-based model, we predicted effects of observed changes (1991–2013) in parameters influencing food abundance and availability: eelgrass biomass (abundance), eelgrass shoot length (availability, as longer shoots more within reach), brant population size (availability, as competition greater with more birds), and sea level (availability, as less food within reach when sea level higher). The model predicted that the ability to gain enough energy to migrate was most strongly influenced by eelgrass biomass (threshold January biomass for migration = 60 g m −2 dry mass). Conversely, annual variation in population size (except for 1998), was relatively low, and variation in eelgrass shoot length and sea level were not strongly related to ability to migrate. We used observed data on brant body mass at Bahía San Quintín and annual survival to test for effects of eelgrass biomass in the real system. The lowest observed values of body mass and survival were in years when biomass was below 60 g m −2 , although in some years of low biomass body mass and/or survival was higher. This suggests that the real birds may have some capacity to compensate to meet their energy demands when eelgrass biomass is low. We discuss consequences for brant population trends and conservation.

Baja California↗

Taxonomic reassessment of the Little pocket mouse, Perognathus longimembris (Rodentia, Heteromyidae) of southern California and northern Baja California

The Little pocket mouse ( Perognathus longimembris ) encompasses 15 to 16 currently recognized subspecies, six of which are restricted to southern California and adjacent northern Baja California. Using cranial geomorphometric shape parameters and dorsal color variables we delineate six regional groups of populations from this area that we recognize as valid, but these differ in name combination and geographic range from the current taxonomy. We resurrect two names from their current placement in synonymies, synonymize two currently recognized subspecies, and we reassign a third. Importantly, we restrict the U. S. Federally endangered Pacific pocket mouse ( P. l. pacificus Mearns) to the vicinity of its type locality at the mouth of the Tijuana River in the southwestern corner of San Diego County and resurrect P. l. cantwelli von Bloeker for the other two population segments along the coast, those that span the northwestern corner of San Diego County and adjacent Orange County and that in coastal Los Angeles County. The name cantwelli would now apply to the only extant populations of the Pacific pocket mouse, a reassignment with obvious management implications. Our taxonomic decisions also reconfigure the ranges of other subspecies of conservation concern, notably P. l. bangsi Mearns and P. l. brevinasus Osgood.

California↗

Spatial extent of seagrasses (Zostera marina and Ruppia maritima) along the central Pacific coast of Baja California, Mexico, 1999–2000

The seagrasses eelgrass ( Zostera marina ) and widgeongrass ( Ruppia maritima ) are prominent features of coastal lagoons along the Pacific coast of Baja California, Mexico, supporting a rich diversity of marine life. Yet little is known about their spatial distribution in this region. This is a concern because of declining trends in the abundance and distribution of seagrass in parts of northern Baja California and southern California. We used 7-band satellite imagery, 4-band digital multispectral videography, and 3-band color aerial photography to map the distribution of eelgrass and widgeongrass in six embayments along the central Pacific coast of Baja California. The total spatial extent of seagrass was estimated to be 42,697 hectares, of which about 70 percent was eelgrass. This seagrass was primarily lower in the intertidal than widgeongrass in all embayments. Eelgrass and widgeongrass composed the greatest proportion (47 percent) of the spatial extent in the two largest embayments, Lagunas Ojo de Liebre and San Ignacio, and these two embayments accounted for 85 percent of all seagrass in the study area. The native cordgrass ( Spartina foliosa ) and pickleweed ( Salicornia spp .) were the predominate vegetation cover type of marshes in the three northern and three southern embayments, respectively. The three southern embayments contained mangrove ( Rhizophora spp.) and the three northern embayments did not, thus marking the northern edge of mangroves along the Pacific coast of North America. This study establishes an embayment-wide baseline for continuing investigations and monitoring future changes in the spatial abundance of seagrasses in central Baja California.

Baja California↗

Abundance of eelgrass (Zostera marina) at key Black Brant (Branta bernicla nigricans) wintering sites along the northern Pacific coast of Baja California, Mexico, 1998–2012

Trends in the abundance and distribution of eelgrass ( Zostera marina ), the primary winter forage of black brant ( Branta bernicla nigricans ), was evaluated at three major wintering sites for black brant along the northern Pacific coast of Baja California, Mexico. This region of northwestern Mexico contains significant beds of eelgrass that were showing signs of decline, which may negatively affect the Pacific flyway population of black brant. Embayment-wide surveys of eelgrass were conducted at Bahia San Quintin (BSQ), Laguna Ojo de Liebre (LOL), and Laguna San Ignacio (LSI) between 1998 and 2012 to estimate baselines and trends in the distribution and abundance of this seagrass in Mexico. Eelgrass was the most abundant and frequently encountered seagrass in each site across survey years. Density and aboveground biomass of eelgrass was greater in BSQ than in LOL and LSI while abundance of widgeongrass ( Ruppia maritima ), a secondary source of food for brant, was greatest in LSI across survey years. Widgeongrass occurred higher in the intertidal zone than did eelgrass in all embayments, and both seagrasses generally shifted to lower water depths along a southward latitudinal gradient. A negative temporal trend in abundance of seagrasses was detected in BSQ that appeared linked to impacts of climate warming and an increase in macroalgae populations. Decreases in abundance of seagrasses were also detected in LOL and LSI, although long-term trends were less certain in LOL. Overall, declines in abundance of eelgrass in Baja California may be influencing the ongoing shift in the winter distribution of brant to areas north of the Mexican border.

Baja California↗

Fast rupture of the 2009 Mw 6.9 Canal de Ballenas earthquake in the Gulf of California dynamically triggers seismicity in California

In the Gulf of California, Mexico, the relative motion across the North America-Pacific boundary is accommodated by a series of marine transform faults and spreading centers. About 40 M>6 earthquakes have occurred in the region since 1960. On 3 August 2009, an Mw 6.9 earthquake occurred near Canal de Ballenas in the region. The earthquake was a strike-slip event with a shallow hypocenter that is likely close to the seafloor. In contrast to an adjacent M7 earthquake, this earthquake triggered a ground-motion-based earthquake early warning algorithm being tested in southern California (∼600 km away). This observation suggests that the abnormally large ground motions and dynamic strains observed for this earthquake relate to its rupture properties. To investigate this possibility, we image the rupture process and resolve the slip distribution of the event using a P-wave back-projection approach and a teleseismic, finite-fault inversion method. Results from these two independent analyses indicate a relatively simple, unilateral rupture propagation directed along-strike in the northward direction. However, the average rupture speed is estimated around 4 km/s, suggesting a possible supershear rupture. The supershear speed is also supported by a Rayleigh wave Mach cone analysis, although uncertainties in local velocity structure preclude a definitive conclusion. The Canal de Ballenas earthquake dynamically triggered seismicity at multiple sites in California, with triggering response characteristics varying from location-to-location. For instance, some of the triggered earthquakes in California occurred up to 24 hours later, suggesting that nonlinear triggering mechanisms likely have modulated their occurrence.

Baja California↗

An analysis of the factors that control fault zone architecture and the importance of fault orientation relative to regional stress

The moment magnitude 7.2 El Mayor−Cucapah (EMC) earthquake of 2010 in northern Baja California, Mexico produced a cascading rupture that propagated through a geometrically diverse network of intersecting faults. These faults have been exhumed from depths of 6−10 km since the late Miocene based on low-temperature thermochronology, synkinematic alteration, and deformational fabrics. Coseismic slip of 1−6 m of the EMC event was accommodated by fault zones that displayed the full spectrum of architectural styles, from simple narrow fault zones (<100 m in width) that have a single high-strain core, to complex wide fault zones (>100 m in width) that have multiple anastomosing high-strain cores. As fault zone complexity and width increase the full spectrum of observed widths (20−200 m), coseismic slip becomes more broadly distributed on a greater number of scarps that form wider arrays. Thus, the infinitesimal slip of the surface rupture of a single earthquake strongly replicates many of the fabric elements that were developed during the long-term history of slip on the faults at deeper levels of the seismogenic crust. We find that factors such as protolith, normal stress, and displacement, which control gouge production in laboratory experiments, also affect the architectural complexity of natural faults. Fault zones developed in phyllosilicate-rich metasedimentary gneiss are generally wider and more complex than those developed in quartzo-feldspathic granitoid rocks. We hypothesize that the overall weakness and low strength contrast of faults developed in phyllosilicate rich host rocks leads to strain hardening and formation of broad, multi-stranded fault zones. Fault orientation also strongly affects fault zone complexity, which we find to increase with decreasing fault dip. We attribute this to the higher resolved normal stresses on gently dipping faults assuming a uniform stress field compatible with this extensional tectonic setting. The conditions that permit slip on misoriented surfaces with high normal stress should also produce failure of more optimally oriented slip systems in the fault zone, promoting complex branching and development of multiple high-strain cores. Overall, we find that fault zone architecture need not be strongly affected by differences in the amount of cumulative slip and instead is more strongly controlled by protolith and relative normal stress.

Baja California↗

Introgression obscures lineage boundaries and phylogeographic history in the western banded gecko, Coleonyx variegatus (Squamata: Eublepharidae)

The geomorphological formation of the Baja California peninsula and the Gulf of California is a principal driver of diversification for the reptiles of North America’s warm deserts. The western banded gecko, Coleonyx variegatus , is distributed throughout the Mojave, Sonoran and Peninsular deserts. In this study we use multilocus sequence data to address deep phylogeographic structure within C. variegatus . Analyses of mtDNA data recover six divergent clades throughout the range of C. variegatus . Topology of the mtDNA gene tree suggests separate origins of peninsular populations with an older lineage in the south and a younger one in the north. In contrast, analyses of multilocus nuclear data provide support for four lineages, corresponding to the subspecies C. v. abbotti , C. v. peninsularis , C. v. sonoriensis and C. v. variegatus . Phylogenetic analyses of the nuclear data recover C. v. abbotti and C. v. peninsularis as a clade, indicating a single origin of the peninsular populations. Discordance between the nuclear and mtDNA data is largely the result of repeated episodes of mtDNA introgression that have obscured both lineage boundaries and biogeographic history. Dating analyses of the combined nuclear and mtDNA data suggest that the peninsular clade diverged from the continental group in the Late Miocene.

Baja California↗

Use of museum specimens to refine historical pronghorn subspecies boundaries

Endangered Sonoran ( Antilocapra americana sonoriensis ) and Peninsular ( A. a. peninsularis ) pronghorn persist largely because of captive breeding and reintroduction efforts. Recovery team managers want to re-establish pronghorn in their native range, but there is currently uncertainty regarding the subspecies status of extinct pronghorn populations that historically inhabited southern California, USA, and northern Baja California, Mexico. To address this uncertainty, we genotyped museum specimens and conducted phylogenetic and population genetic analyses of historical data in the context of 3 contemporary pronghorn populations. The historical northern Baja California pronghorn share the most ancestry with contemporary Peninsular pronghorn, whereas pronghorn in southern California share more ancestry with contemporary American ( A. a. americana ) pronghorn. For reintroductions into northern Baja California, the Peninsular subspecies is more appropriate based on museum genetic data. For reintroductions into Southern California, ecological and genetic factors are both important, as the subspecies most genetically related to historical populations (American) may not be well-adapted to the hot, low-elevation deserts of the reintroduction area. © 2019 The Wildlife Society.

California↗

Depth determination of the 2010 El Mayor‐Cucapah earthquake sequence (M ≥ 4.0)

The 2010 M W 7.2 El Mayor‐Cucapah earthquake ruptured a zone of ~120 km in length in northern Baja California. The geographic distribution of this earthquake sequence was well constrained by waveform relocation. The depth distribution, however, was poorly determined as it is near the edge of, or outside, the Southern California Seismic Network. Here we use two complementary methods to constrain the focal depths of moderate‐sized events ( M ≥ 4.0) in this sequence. We first determine the absolute earthquake depth by modeling the regional depth phases at high frequencies (~1 Hz). We mainly focus on Pn and its depth phases pPn and sPn , which arrive early at regional distance and are less contaminated by crustal multiples. To facilitate depth phase identification and to improve signal‐to‐noise ratio, we take advantage of the dense Southern California Seismic Network and use array analysis to align and stack Pn waveforms. For events without clear depth phases, we further determine their relative depths with respect to those with known depths using differential travel times of the Pn , direct P , and direct S phases recorded for event pairs. Focal depths of 93 out of 122 M ≥ 4.0 events are tightly constrained with absolute uncertainty of about 1 km. Aftershocks are clustered in the depth range of 3–10 km, suggesting a relatively shallow seismogenic zone, consistent with high surface heat flow in this region. Most aftershocks are located outside or near the lower terminus of coseismic high‐slip patches of the main shock, which may be governed by residual strains, local stress concentration, or postseismic slip.

Baja California↗

Establishing genome sizes of focal fishery and aquaculture species along Baja California, Mexico

Genome size—the total haploid content of nuclear DNA— is constant in all cells in individuals within a species, but differs among species. Consequently, the genome size is a quantifiable genetic signature that not only characterizes a species, but it can reflect chromatin modifications, which play fundamental roles in most biological processes that are involved in the manipulation and expression of DNA. This characteristic makes the genome size a crucial parameter for genetic research on endemic aquatic species and for genetic manipulations in aquaculture species. Technologies for genetic assessments and improvements applied to fishery and aquaculture species use genome size values as a means by which hybrids, polyploids, and sex can be identified, when sex chromosomes exist. The objectives of this study were to determine genome sizes of aquatic species with economic and biological importance along the Pacific coast of Mexico, as well as to identify the appropriate reference standards for use in this study. Blood, hemolymph or milt were collected from 10 species occurring along the coast of Baja California: Sablefish Anoplopoma fimbria , Black Snapper Lutjanus novemfasciatus , California Halibut Paralichthys californicus , Pacific Sardine Sardinops sagax , Flag Rockfish Sebastes rubrivinctus , Starry Rockfish Sebastes constellatus, Totoaba Totoaba macdonaldi , Whiteleg Shrimp Litopenaeus vannamei and two Yellowtail Seriola lalandi and S. dorsalis . Nuclear DNA was stained with propidium iodide solution and the genome size was determined by flow cytometry, with results ranging from 0.61 pg (1.22 pg/diploid cell) to 2.59 pg (5.18 pg/diploid cell), with the smallest value in Sablefish and the largest in the Whiteleg Shrimp. No significant differences were detected ( P ≤ 0.05) among individuals of the same species; the likely reason behind any dissimilar DNA content values with those from the literature were differences in methodologies or variations in genetics. Red-ear Slider Turtle Trachemys scripta elegans 2.65 pg (5.30 pg/diploid cell) and Red Junglefowl Gallus gallus 1.27 pg (2.54 pg/diploid cell) were chosen as the standards for reference values. These results establish the basis for the Mexican National Aquatic Genetic Resources project supporting genetic improvements for aquaculture and conservation status parameters for fisheries species.

Baja California↗

Occurrence of Batrachochytrium dendrobatidis in anurans of the Mediterranean region of Baja California, México

Chytridiomycosis is caused by the fungal pathogen Batrachochytrium dendrobatidis ( Bd ) and is regarded as one of the most significant threats to global amphibian populations. In México, Bd was first reported in 2003 and has now been documented in 13 states. We visited 33 localities and swabbed 199 wild-caught anurans from 7 species (5 native, 2 exotic) across the Mediterranean region of the state of Baja California. Using quantitative PCR, Bd was detected in 94 individuals (47.2% of samples) at 25 of the 33 survey localities for 5 native and 1 exotic frog species. The exotic Xenopus laevis was the only species that tested completely negative for Bd . We found that remoteness, distance to agricultural land, and elevation were the best predictors of Bd presence. These are the first Bd -positive results for the state of Baja California and its presence should be regarded as an additional conservation threat to the region’s native frog species.

Baja California↗

Unraveling the channel–lobe transition zone with high-resolution AUV bathymetry: Navy Fan, offshore Baja California, Mexico

Ultra-high-resolution (1 m * 1 m * 0.25 m) bathymetry was acquired with an autonomous underwater vehicle (AUV) over a sector of the Navy Fan offshore Baja California. The survey specifically targeted an area where the former interpretation of the fan showed a channel–lobe transition; however, the lobe and the transition were not recognized. Instead, the newly acquired bathymetry shows that the previously identified channel continues basinward changing its overall morphology and stratigraphic architecture, becoming gradually but significantly wider (650–1000 m) and of lower relief (3–4 m). Cores from the channel thalweg recovered mud-poor (< 5%) well-sorted sands, interpreted as deposited by fully turbulent flows. The cores also show several mud-rich (9–18%) poorly sorted sands, probably indicating deposition from more cohesive flows. The high-resolution bathymetry shows large sectors of the seafloor sculpted by elaborate bedforms and scours. The overbank area north of the channel exhibits the most numerous and prominent scours, interpreted to have been largely generated by flow stripping at a bend in the channel. Along high-gradient sectors (more than approximately 1¯) of this area, the scours are largest and deepest. Some of these scours show an erosional headwall and a distal upflow-dipping depositional bulge, forming repetitive bedforms interpreted as erosional cyclic steps associated with locked-in-place trains of hydraulic jumps. The scours seem to coalesce to form an incipient channel, which would likely drive the avulsion of the main channel. Further basinward, average gradients decrease (< 0.6¯ ) and scours become smaller and less deep suggesting a gradient control on erosion. The southern channel margin and adjacent overbank area exhibit a trend of scours that are elongated transverse to flow, that successively repeat themselves basinwards, and that at times merge with sediment waves. Probably these scours are genetically linked to sediment waves, and they may have been formed by cyclic-step-like processes as well. The acquired bathymetry represents a breakthrough in the imaging of the proximal sectors of deep-sea fans, which provides the basis for an accurate morphometric characterization and the understanding of sedimentary processes and morphodynamics associated with the delivery of sediment into the deep sea.

Baja California↗

Status of the California Red-legged Frog (Rana draytonii) in the State of Baja California, México

The California Red-legged Frog ( Rana draytonii ) is a threatened species in the United States that has undergone population declines, especially in southern California. Due to the lack of information on the status of Mexican populations, we surveyed for the presence of R. draytonii in Baja California and assessed possible threats to population persistence. Our study area extended from the U.S.-Mexican border to the southern end of the distribution of the species in the Sierra San Pedro M&aacute;rtir. We found R. draytonii at six of 15 historical sites, none at five proxy sites (i.e., alternative sites chosen because the historical record lacked precise locality data), and four at 24 additional sites. The 10 occupied sites are within three watersheds in the Sierra San Pedro M&aacute;rtir (two sites at Arroyo San Rafael, two sites at Arroyo San Telmo, and six sites at Arroyo Santo Domingo). We did not detect R. draytonii at 60% of historical sites, including the highest elevation site at La Encantada and multiple low-elevation coastal drainages, suggesting the species has declined in Baja California. The threats we noted most frequently were presence of exotic aquatic animal species, water diversion, and cattle grazing. Management of remaining populations and local education is needed to prevent further declines.

Baja California↗

Geologic and structural controls on rupture zone fabric: A field-based study of the 2010 M w 7.2 El Mayor–Cucapah earthquake surface rupture

We systematically mapped (scales >1:500) the surface rupture of the 4 April 2010 Mw (moment magnitude) 7.2 El Mayor-Cucapah earthquake through the Sierra Cucapah (Baja California, northwestern Mexico) to understand how faults with similar structural and lithologic characteristics control rupture zone fabric, which is here defined by the thickness, distribution, and internal configuration of shearing in a rupture zone. Fault zone thickness and master fault dip are strongly correlated with many parameters of rupture zone fabric. Wider fault zones produce progressively wider rupture zones and both of these parameters increase systematically with decreasing dip of master faults, which varies from 20&deg; to 90&deg; in our dataset. Principal scarps that accommodate more than 90% of the total coseismic slip in a given transect are only observed in fault sections with narrow rupture zones (<25 m). As rupture zone thickness increases, the number of scarps in a given transect increases, and the scarp with the greatest relative amount of coseismic slip decreases. Rupture zones in previously undeformed alluvium become wider and have more complex arrangements of secondary fractures with oblique slip compared to those with pure normal dip-slip or pure strike-slip. Field relations and lidar (light detection and ranging) difference models show that as magnitude of coseismic slip increases from 0 to 60 cm, the links between kinematically distinct fracture sets increase systematically to the point of forming a throughgoing principal scarp. Our data indicate that secondary faults and penetrative off-fault strain continue to accommodate the oblique kinematics of coseismic slip after the formation of a thoroughgoing principal scarp. Among the widest rupture zones in the Sierra Cucapah are those developed above buried low angle faults due to the transfer of slip to widely distributed steeper faults, which are mechanically more favorably oriented. The results from this study show that the measureable parameters that define rupture zone fabric allow for testing hypotheses concerning the mechanics and propagation of earthquake ruptures, as well as for siting and designing facilities to be constructed in regions near active faults.

Baja California↗

Evidence against a Pleistocene desert refugium in the Lower Colorado River Basin

Aim The absence of Sonoran Desert plants in late Pleistocene-aged packrat middens has led to speculation that they survived glacial episodes either in refugia as intact associations (Clementsian community concept) or in dry microsites within chaparral or woodland according to individualistic species responses (Gleasonian community concept). To test these hypotheses, we developed a midden record from one likely refugium in north-eastern Baja California, Mexico. We also measured stomatal guard cell size in fossil leaves to further evaluate site-level individualistic responses of Larrea tridentata (creosote bush) ploidy races to climatic changes, including monsoonal history, over the late Quaternary. Location Sierra Ju&aacute;rez, Lower Colorado River Basin, north-eastern Baja California, Mexico. Methods Packrat ( Neotoma ) middens were collected from <300 m elevation on the eastern piedmont of the Sierra Ju&aacute;rez. Plant macrofossils and pollen were analysed from 50 dated middens, including determination of Larrea tridentata ploidy races. Results Pleistocene middens dating back to >55,000 cal. yr BP contained a mix of extralocal species characteristic of chaparral and pinyon&ndash;juniper&ndash;oak woodland, along with some modern desert elements. Many other desert taxa were absent during the Pleistocene, although most had arrived by the beginning of the Holocene 11,700 years ago. Main conclusions The assemblage of chaparral, woodland and select desert elements refutes the hypothesis that the Lower Colorado River Basin served as a late Pleistocene refugium for Sonoran Desert flora. The rapid arrival of most missing desert species by the early Holocene suggests they did not have far to migrate. They probably survived the last glacial period as smaller, disparate populations in dry microsites within chaparral and pinyon&ndash;juniper&ndash;oak woodlands. Diploid and tetraploid races of Larrea tridentata were present during the Pleistocene, but hexaploids did not appear until the mid-Holocene. This demonstrates that individualistic responses to climate involved genetic variants, in this case cytotypes, and not just species.

Baja California↗