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Thomas J. Smith

Publications and source records attributed to Thomas J. Smith.

33 records · Page 2Linked to original sources
USGS2011

A proxy for high-resolution regional reanalysis for the Southeast United States: assessment of precipitation variability in dynamically downscaled reanalyses

We present an analysis of the seasonal, subseasonal, and diurnal variability of rainfall from COAPS Land- Atmosphere Regional Reanalysis for the Southeast at 10-km resolution (CLARReS10). Most of our assessment focuses on the representation of summertime subseasonal and diurnal variability.Summer precipitation in the Southeast United States is a particularly challenging modeling problem because of the variety of regional-scale phenomena, such as sea breeze, thunderstorms and squall lines, which are not adequately resolved in coarse atmospheric reanalyses but contribute significantly to the hydrological budget over the region. We find that the dynamically downscaled reanalyses are in good agreement with station and gridded observations in terms of both the relative seasonal distribution and the diurnal structure of precipitation, although total precipitation amounts tend to be systematically overestimated. The diurnal cycle of summer precipitation in the downscaled reanalyses is in very good agreement with station observations and a clear improvement both over their "parent" reanalyses and over newer-generation reanalyses. The seasonal cycle of precipitation is particularly well simulated in the Florida; this we attribute to the ability of the regional model to provide a more accurate representation of the spatial and temporal structure of finer-scale phenomena such as fronts and sea breezes. Over the northern portion of the domain summer precipitation in the downscaled reanalyses remains, as in the "parent" reanalyses, overestimated. Given the degree of success that dynamical downscaling of reanalyses demonstrates in the simulation of the characteristics of regional precipitation, its favorable comparison to conventional newer-generation reanalyses and its cost-effectiveness, we conclude that for the Southeast United states such downscaling is a viable proxy for high-resolution conventional reanalysis.

Climate Dynamics↗
USGS2011

The influence of the Atlantic Warm Pool on the Florida panhandle sea breeze

In this paper we examine the variations of the boreal summer season sea breeze circulation along the Florida panhandle coast from relatively high resolution (10 km) regional climate model integrations. The 23 year climatology (1979–2001) of the multidecadal dynamically downscaled simulations forced by the National Centers for Environmental Prediction–Department of Energy (NCEP‐DOE) Reanalysis II at the lateral boundaries verify quite well with the observed climatology. The variations at diurnal and interannual time scales are also well simulated with respect to the observations. We show from composite analyses made from these downscaled simulations that sea breezes in northwestern Florida are associated with changes in the size of the Atlantic Warm Pool (AWP) on interannual time scales. In large AWP years when the North Atlantic Subtropical High becomes weaker and moves further eastward relative to the small AWP years, a large part of the southeast U.S. including Florida comes under the influence of relatively strong anomalous low‐level northerly flow and large‐scale subsidence consistent with the theory of the Sverdrup balance. This tends to suppress the diurnal convection over the Florida panhandle coast in large AWP years. This study is also an illustration of the benefit of dynamic downscaling in understanding the low‐frequency variations of the sea breeze.

Florida↗
USGS2011

The role of the Everglades Mangrove Ecotone Region (EMER) in regulating nutrient cycling and wetland productivity in South Florida

The authors summarize the main findings of the Florida Coastal Everglades Long-Term Ecological Research (FCE-LTER) program in the EMER, within the context of the Comprehensive Everglades Restoration Plan (CERP), to understand how regional processes, mediated by water flow, control population and ecosystem dynamics across the EMER landscape. Tree canopies with maximum height <3 m cover 49% of the EMER, particularly in the SE region. These scrub/dwarf mangroves are the result of a combination of low soil phosphorus (P < 59 μg P g dw −1 ) in the calcareous marl substrate and long hydroperiod. Phosphorus limits the EMER and its freshwater watersheds due to the lack of terrigenous sediment input and the phosphorus-limited nature of the freshwater Everglades. Reduced freshwater delivery over the past 50 years, combined with Everglades compartmentalization and a 10 cm rise in coastal sea level, has led to the landward transgression (∼1.5 km in 54 years) of the mangrove ecotone. Seasonal variation in freshwater input strongly controls the temporal variation of nitrogen and P exports (99%) from the Everglades to Florida Bay. Rapid changes in nutrient availability and vegetation distribution during the last 50 years show that future ecosystem restoration actions and land use decisions can exert a major influence, similar to sea level rise over the short term, on nutrient cycling and wetland productivity in the EMER.

Florida↗
USGS2010

Controls on mangrove forest‐atmosphere carbon dioxide exchanges in western Everglades National Park

We report on net ecosystem production (NEP) and key environmental controls on net ecosystem exchange (NEE) of carbon dioxide (CO 2 ) between a mangrove forest and the atmosphere in the coastal Florida Everglades. An eddy covariance system deployed above the canopy was used to determine NEE during January 2004 through August 2005. Maximum daytime NEE ranged from −20 to −25 μ mol (CO 2 ) m −2 s −1 between March and May. Respiration (R d ) was highly variable (2.81 ± 2.41 μ mol (CO 2 ) m −2 s −1 ), reaching peak values during the summer wet season. During the winter dry season, forest CO 2 assimilation increased with the proportion of diffuse solar irradiance in response to greater radiative transfer in the forest canopy. Surface water salinity and tidal activity were also important controls on NEE. Daily light use efficiency was reduced at high (>34 parts per thousand (ppt)) compared to low (<17 ppt) salinity by 46%. Tidal inundation lowered daytime R d by ∼0.9 μ mol (CO 2 ) m −2 s −1 and nighttime R d by ∼0.5 μ mol (CO 2 ) m −2 s −1 . The forest was a sink for atmospheric CO 2 , with an annual NEP of 1170 ± 127 g C m −2 during 2004. This unusually high NEP was attributed to year‐round productivity and low ecosystem respiration which reached a maximum of only 3 g C m −2 d −1 . Tidal export of dissolved inorganic carbon derived from belowground respiration likely lowered the estimates of mangrove forest respiration. These results suggest that carbon balance in mangrove coastal systems will change in response to variable salinity and inundation patterns, possibly resulting from secular sea level rise and climate change.

Florida↗
USGS2009

Are mangroves in the tropical Atlantic ripe for invasion? Exotic mangrove trees in the forests of South Florida

Two species of mangrove trees of Indo-Pacific origin have naturalized in tropical Atlantic mangrove forests in South Florida after they were planted and nurtured in botanic gardens. Two Bruguiera gymnorrhiza trees that were planted in the intertidal zone in 1940 have given rise to a population of at least 86 trees growing interspersed with native mangrove species Rhizophora mangle , Avicennia germinans and Laguncularia racemosa along 100 m of shoreline; the population is expanding at a rate of 5.6% year −1 . Molecular genetic analyses confirm very low genetic diversity, as expected from a population founded by two individuals. The maximum number of alleles at any locus was three, and we measured reduced heterozygosity compared to native-range populations. Lumnitzera racemosa was introduced multiple times during the 1960s and 1970s, it has spread rapidly into a forest composed of native R. mangle , A. germinans , Laguncularia racemosa and Conocarpus erectus and now occupies 60,500 m 2 of mangrove forest with stem densities of 24,735 ha −1 . We estimate the population growth rate of Lumnitzera racemosa to be between 17 and 23% year −1 . Populations of both species of naturalized mangroves are dominated by young individuals. Given the long life and water-dispersed nature of propagules of the two exotic species, it is likely that they have spread beyond our survey area. We argue that the species-depauperate nature of tropical Atlantic mangrove forests and close taxonomic relatives in the more species-rich Indo-Pacific region result in the susceptibility of tropical Atlantic mangrove forests to invasion by Indo-Pacific mangrove species.

Florida↗
USGS2009

Mangrove forest recovery in the Everglades following Hurricane Wilma

On October 24th, 2005, Hurricane Wilma made landfall on the south western shore of the Florida peninsula. This major disturbance destroyed approximately 30 percent of the mangrove forests in the area. However, the damage to the ecosystem following the hurricane provided researchers at the Florida Coastal Everglades (FCE) LTER site with the rare opportunity to track the recovery process of the mangroves as determined by carbon dioxide (CO 2 ) and energy exchanges, measured along daily and seasonal time scales.

Florida↗
USGS2008

Faunal impact on vegetation structure and ecosystem function in mangrove forests: A review

The last 20 years witnessed a real paradigm shift concerning the impact of biotic factors on ecosystem functions as well as on vegetation structure of mangrove forests. Before this small scientific revolution took place, structural aspects of mangrove forests were viewed to be the result of abiotic processes acting from the bottom-up, while, at ecosystem level, the outwelling hypothesis stated that mangroves primary production was removed via tidal action and carried to adjacent nearshore ecosystems where it fuelled detrital based food-webs. The sesarmid crabs were the first macrofaunal taxon to be considered a main actor in mangrove structuring processes, thanks to a number of studies carried out in the Indo-Pacific forests in the late 1970s and early 1980s. Following these classical papers, a number of studies on Sesarmidae feeding and burrowing ecology were carried out, which leave no doubts about the great importance of these herbivorous crabs in structuring and functioning Old world ecosystems. Although Sesarmidae are still considered very important in shaping mangrove structure and functioning, recent literature emphasizes the significance of other invertebrates. The Ocypodidae have now been shown to have the same role as Sesarmidae in terms of retention of forest products and organic matter processing in New world mangroves. In both New and Old world mangroves, crabs process large amounts of algal primary production, contribute consistently to retention of mangrove production and as ecosystem engineers, change particle size distribution and enhance soil aeration. Our understanding of the strong impact of gastropods, by means of high intake rates of mangrove products and differential consumption of propagules, has changed only recently. The role of insects must also be stressed. It is now clear that older techniques used to assess herbivory rates by insects strongly underestimate their impact, both in case of leaf eating and wood boring species and that herbivorous insects can potentially play a strong role in many aspects of mangrove ecology. Moreover, researchers only recently realized that ant&ndash;plant interactions may form an important contribution to our understanding of insect&ndash;plant dynamics in these habitats. Ants seem to be able to relieve mangroves from important herbivores such as many insects and sesarmid crabs. It thus seems likely that ants have positive effects on mangrove performance.

Aquatic Botany↗
USGS2007

A tale of two storms: Surges and sediment deposition from Hurricanes Andrew and Wilma in Florida’s southwest coast mangrove forests

Hurricanes can be very different from each other. Here we examine the impacts that two hurricanes, Andrew and Wilma, had in terms of storm surge and sediment deposition on the southwest coast of Florida. Although Wilma was the weaker storm, it had the greater impact. Wilma had the higher storm surge over a larger area and deposited more sediment than did Andrew. This effect was most likely due to the size of Wilma's eye, which was four times larger than that of Andrew.

Florida↗
USGS2006

Wildlife and habitat damage assessment from Hurricane Charley: Recommendations for recovery of the J. N. "Ding" Darling National Wildlife Refuge Complex

&bull; On 13 August 2004, the first of four hurricanes to strike Florida in <6 weeks came ashore near J. N. &ldquo;Ding&rdquo; Darling National Wildlife Refuge (JNDDNWR) Complex, Sanibel Island, Florida. The eye of Category 4 Hurricane Charley passed just north of Sanibel Island with maximum sustained winds of 145 mph (123 knots) and a storm surge of 0.3-2.7 m (1-9 ft). Three USGS-BRD scientists (coastal ecologist and research wildlife biologists) and a USFWS wildlife biologist surveyed the storm damage to JNDDNWR Complex on the ground from 20-24 September 2004. &bull; At the request of United States Fish and Wildlife Service refuge staff, the USGS team concentrated on assessing damage to wetlands and habitat for selected bird populations (especially mangrove forests, Mangrove Cuckoos [Coccyzus minor], and Black-whiskered Vireo [Vireo altiloquus]), waterbird rookeries (mangrove islands), impoundments (waterbirds and waterfowl), sea grass beds (manatees), and upland hardwood hammocks and ridges (threatened eastern indigo snake [Drymarchon couperi]). &bull; The refuge complex sustained moderate to catastrophic damage to vegetation, especially mangrove forests and waterbird nesting or roosting islands. Lumpkin Island, Hemp Island, and Bird Key waterbird nesting areas had >50% and sometimes 90% of their vegetation severely damaged (dead, broken tree stems, and tipped trees). The Shell Mound Trail area of JNDDNWR sustained catastrophic damage to its old growth mangrove forests. Direct storm mortality and injury to manatees in the area of the JNDDNWR Complex was probably slight as manatees may have several strategies to reduce storm mortality. Damage to seagrass beds, an important habitat for manatees, fishes and invertebrates, is believed to be limited to the breach at North Captiva Island. At this breach, refuge staff documented inundation of beds by sand and scarring by trees dragged by winds. &bull; Because seagrass beads and manatee habitat extend beyond refuge boundaries (see p. 28), a regional approach with partner agencies to more thoroughly assess storm impacts and monitor recovery of seagrass and manatees is recommended. &bull; Besides intensive monitoring of waterbirds and their nesting habitat (pre- and post-storm), the survey team recommends that the Mangrove Cuckoo be used as an indicator species for recovery of mangrove forests and also for monitoring songbirds at risk (this songbird is habitat-area sensitive). Black-whiskered Vireo may be another potential indicator species to monitor in mangrove forests. Monitoring for these species can be done by distance sampling on transects or by species presenceabsence from point counts. &bull; Damaged vegetation should be monitored for recovery (permanent or long-term plots), especially where previous study plots have been established and with additional plots in mangrove forests of waterbird nesting islands and freshwater wetlands. &bull; Potential loss of wetlands (and information for management) may be prevented by water level monitoring (3 permanent stations), locating the positions (GPS-GIS) and maintaining existing water control structures, creating a GIS map of the refuge with accurate vertical data, and monitoring and eradicating invasive plants. Invasive species, including Brazilian pepper (Schinus terebinthifolius) and air potato (Dioscorea bulbifora), were common in a very limited survey and may become more dominant in areas damaged by the storm. Special attention is needed to eradicate these exotic plants. &bull; As an important monitoring goal, the survey team recommends that species presence-absence data analysis (with probability of detection) be used to determine changes in animal communities. This could be accomplished possibly with comparison to other storm-damaged and undamaged refuges in the Region. This information may be helpful to refuge managers when storms return in the future.

Florida↗
USGS2004

Development of a long-term sampling network to monitor restoration success in the southwest coastal Everglades: Vegetation, hydrology, and sediments

Introduction and History Hurricane Andrew, a Category 5 storm, crossed the southern Florida peninsula on the morning of August 24, 1992. Following the storm, the National Park Service conducted an environmental damage assessment to gauge the storm's impacts on the natural resources of south Florida Park Service holdings. Although hurricanes have impacted Park Service lands such as the Everglades in the past, no systematic, permanent sampling scheme has been established to monitor long-term recovery (or lack thereof) following disturbance. In October 1992, vegetation monitoring plots were established in heavily damaged areas of mangrove forest on the southwest coast of the Everlgades, along the Lostmans and Broad Rivers. As the permanent plot network was being established, funding was awarded for the South Florida Global Climate Change project (SOFL-GCC). This led to the establishment of a network of hydrological monitoring stations. Finally, sediment elevation tables (SETs) were installed at many locations. SETs provide the means to measure very small changes (2 mm) in the sediment surface elevation accurately over time. We also set up marker horizons to measure accretion of sediment at each site. Sampling sites were located along three transects extending from upstream freshwater wetlands to downstream saltwater wetlands along the Shark, Lostmans and Chatham Rivers in Everglades National Park. While we were developing our sampling network for basic scientific research needs, concern mounted over the health of the Greater Everglades Ecosystem and in particular over the influence of decreased freshwater flows. Ecosystem restoration planning was begun, resulting in the multi-agency, $8 billion Comprehensive Everglades Restoration Plan (CERP). Our co-located sampling networks allow us to track the interaction of hydrology, sediment, and vegetation over time, and will provide the opportunity to monitor the progress of the Everglades restoration and to gauge its success. Our earlier research questions have been modified over time to place a major emphasis on CERP needs, while still recognizing the importance of other processes, including disturbance and sea-level rise. Our research addresses processes relevant to the following restoration and related questions: * How will increasing freshwater flow affect wetland primary production? * Will increasing freshwater inflow alter nutrient availability? * Does recovery following disturbance in mangroves depend on freshwater inflow? * Will the position of vegetation ecotones change in response to upstream water management? * What will be the influence of global climate change, such as sea-level rise, on the Everglades restoration? * Will processes of wetlands soil formation be altered by sea-level rise and changed freshwater inflow?

Florida↗
USGS1994

Mangroves, hurricanes, and lightning strikes: Assessment of Hurricane Andrew suggests an interaction across two differing scales of disturbance

The track of Hurricane Andrew carried it across one of the most extensive mangrove for ests in the New World. Although it is well known that hurricanes affect mangrove forests, surprisingly little quantitative information exists concerning hurricane impact on forest structure, succession, species composition, and dynamics of mangrove-dependent fauna or on rates of eco-system recovery (see Craighead and Gilbert 1962, Roth 1992, Smith 1992, Smith and Duke 1987, Stoddart 1969). After Hurricane Andrew's passage across south Florida, we assessed the environmental damage to the natural resources of the Everglades and Biscayne National Parks. Quantitative data collected during subsequent field trips (October 1992 to July 1993) are also provided. We present measurements of initial tree mortality by species and size class, estimates of delayed (or continuing) tree mortality, and observations of geomorphological changes along the coast and in the forests that could influence the course of forest recovery. We discuss a potential interaction across two differing scales of disturbance within mangrove forest systems: hurricanes and lightning strikes.

Florida↗