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Theodore R. Castro-Santos

Publications and source records attributed to Theodore R. Castro-Santos.

54 records · Page 3Linked to original sources
USGS2015

Accelerometer-derived activity correlates with volitional swimming speed in lake sturgeon (Acipenser fulvescens)

Quantifying fine-scale locomotor behaviours associated with different activities is challenging for free-swimming fish. Biologging and biotelemetry tools can help address this problem. An open channel flume was used to generate volitional swimming speed (Us) estimates of cultured lake sturgeon (Acipenser fulvescens Rafinesque, 1817) and these were paired with simultaneously recorded accelerometer-derived metrics of activity obtained from three types of data-storage tags. This study examined whether a predictive relationship could be established between four different activity metrics (tail-beat frequency (TBF), tail-beat acceleration amplitude (TBAA), overall dynamic body acceleration (ODBA), and vectorial dynamic body acceleration (VeDBA)) and the swimming speed of A. fulvescens. Volitional Us of sturgeon ranged from 0.48 to 2.70 m·s−1 (0.51–3.18 body lengths (BL) · s−1). Swimming speed increased linearly with all accelerometer-derived metrics, and when all tag types were combined, Us increased 0.46 BL·s−1 for every 1 Hz increase in TBF, and 0.94, 0.61, and 0.94 BL·s−1 for every 1g increase in TBAA, ODBA, and VeDBA, respectively. Predictive relationships varied among tag types and tag-specific parameter estimates of Us are presented for all metrics. This use of acceleration data-storage tags demonstrated their applicability for the field quantification of sturgeon swimming speed.

Canadian Journal of Zoology↗
USGS2014

Passage of native riverine fishes through geometrically different sections of a vertical slot fishway on the Moselle River, Germany

In order to study effects of different geometric types of pools or change of the flow direction on the passability of fish, sets of PIT antennas were installed inside a modern vertical slot fishway at the mouth of the River Moselle. Fish of 13 abundant species were caught and tagged with PIT tags in 2013 and released in the tailwater of Koblenz. 16% of the tagged fish were detected entering the fishway a short time after release. These individuals provided data on entry and passage rates for different sections of the fishway. Preliminary results show differences in passage time and passage rates between different sections of the fishway.

Moselle River↗
USGS2013

Survival and behavioral effects of exposure to a hydrokinetic turbine on juvenile Atlantic salmon and adult American shad

This paper describes a series of experiments designed to measure the effect of exposure to a full-scale, vertical axis hydrokinetic turbine on downstream migrating juvenile Atlantic salmon ( N =75) and upstream migrating adult American shad ( N =208). Controlled studies were performed in a large-scale, open-channel flume, and all individuals approached the turbine under volitional control. No injuries were observed, and there was no measurable increase in mortality associated with turbine passage. Exposure to the turbine elicited behavioral responses from both species, however, with salmon passing primarily over the downrunning blades. Shad movement was impeded by the device, as indicated by fewer attempts of shorter duration and reduced distance of ascent up the flume. More work should be performed in both laboratory and field conditions to determine to what extent these effects are likely to influence free-swimming fish.

Massachusetts↗
USGS2012

Evaluation of nature-like and technical fishways for the passage of alewives at two coastal streams in New England

Nature-like fishways have been designed with the intent to reconnect river corridors and provide passage for all species occurring in a system. The approach is gaining popularity both in Europe and North America, but performance of these designs has not been quantitatively evaluated in a field setting for any North American species. Two nature-like fishways and three technical fishways in New England were evaluated for passage of anadromous adult alewives Alosa pseudoharengus by using passive integrated transponder (PIT) telemetry. A perturbation boulder rock ramp (32 m long; 4.2% slope) constructed in Town Brook (Plymouth, Massachusetts) passed 94% of the fish that made passage attempts, with most fish ascending the ramp in less than 22 min. In the East River (Guilford, Connecticut), a step-pool bypass design (48 m long; 7.1% slope) passed only 40% of attempting fish, with a median transit time of 75 min. In Town Brook, a technical pool-and-weir fishway (14 m long; 14.3% slope) exhibited poor entry and poor passage for the fish. In contrast, in the East River, two technical steeppass fishways (3 m long; 29.6% and 9.6% slopes) passed the majority of available fish, although one of these steeppass fishways may have lacked sufficient flow to attract fish to the entrance. In both Town Brook and the East River, tagged fish passed rapidly downstream through all fishways after spawning. In the East River, the amount of time fish spent in the spawning habitat before migrating downstream ranged from 1 to 41 d. These studies demonstrate that some nature-like and technical fishway designs can effectively facilitate passage of alewives, but a fishway's location in relation to a spillway is important, and further evaluations are required to more precisely identify the influence of the vertical drop per pool and the specific local hydraulics on alewife behaviors and passage performance.

New England↗
USGS2012

A barrier to upstream migration in the fish passage of Itaipu Dam (Canal da Piracema), Paraná River basin

The majority of the fish passages built in the Neotropical region are characterised by low efficiency and high selectivity; in many cases, the benefits to fish populations are uncertain. Studies conducted in the Canal da Piracema at Itaipu dam on the Parana River indicate that the system component designated as the Discharge channel in the Bela Vista River (herein named Canal de deságue no rio Bela Vista or CABV), a 200 m long technical section, was the main barrier to the upstream migration. The aim of this study was to evaluate the degree of restriction imposed by the CABV on upstream movements of Prochilodus lineatus and Leporinus elongatus, Characiformes. Fish were tagged with passive integrated transponders (PIT tags) and released both downstream and upstream of this critical section. Individuals of both species released downstream of the CABV took much more time to reach the upper end of the system (43.6 days vs. 15.9 days), and passed in much lower proportions (18% vs. 60.8%) than those tagged upstream of this component. Although more work is needed to differentiate between fishway effects and natural variation in migratory motivation, the results clearly demonstrate passage problems at the CABV.

Itaipu Dam, Paraná River↗
USGS2012

Culverts in paved roads as suitable passages for neotropical fish species

Improperly installed or poorly maintained culverts can pose a serious threat to fish by disrupting their habitat and endangering spawning success. Road culverts that are not designed for fish passage frequently can become obstacles. This can be especially problematic for migratory species, but can lead to fragmentation of resident populations as well. This study evaluated 40 culverts of 29 sites within a 25-km radius from Toledo city, Paraná State, southern Brazil, with respect to their likely effects on movement of the local ichthyofauna. We collected data on the shape and length of culverts, culvert material, waterfall height, water column depth, slope, and estimated flow velocity. Culverts were categorized by level of barrier risk for upstream migration: high, medium, low, and impassable, as well as the type of barrier posed (fall height, depth, length and velocity). Most of culverts analyzed were considered potential barriers to fish movement, with 45% classified as impassible, 45% as high risk, 10% as medium risk, and no culverts as low risk. Brazilian culverts as fishways will require additional monitoring and studies to corroborate the premises proposed in the present study. Road culvert projects that are properly built and maintained will be able to simultaneously improve function of roadways and protect fish populations.

Parana↗
USGS2012

Passage performance of long-distance upstream migrants at a large dam on the Paraná River and the compounding effects of entry and ascent

This paper presents results of a fishway evaluation performed at the Engenheiro Sérgio Motta Hydroelectric Power Plant (known as Porto Primavera) - CESP, Paraná River, Brazil. The evaluation was designed to quantify entry and passage proportions of 4 long-distance migratory fish species: Brycon orbignyanus (piracanjuba), Piaractus mesopotamicus (pacu), Prochilodus lineatus (curimba), and Rhinelepis aspera (cascudo-preto). Proportions finding and entering the fishway differed between species, ranged from 7.4 % (Prochilodus lineatus) to 55.4% (Piaractus mesopotamicus). Also, proportion passing was different between species, ranged from 31% (R. aspera) to 100% (Prochilodus lineatus). Fish that were marked and released within the fishway had greater failure rates than those that entered volitionally. Total time to pass ranged from 1.48 hours (Prochilodus lineatus) to 178.9 hours (R. aspera). Failure rates were greatest in the lower end of the fishway. Although some individuals of all species passed successfully, significant challenges remain to restoring connectivity of the upper Paraná River.

Sáo Paulo States↗
USGS2012

Using mark-recapture models to estimate survival from telemetry data: Chapter 9.2

Analyzing telemetry data within a mark–recapture framework is a powerful approach for estimating demographic parameters (e.g., survival and movement probabilities) that might otherwise be difficult to measure. Yet many studies using telemetry techniques focus on fish behavior and fail to recognize the potential of telemetry data to provide information about fish survival. The sophistication of both mark–recapture modeling and telemetry has dramatically improved since the 1980s, largely due to technological advancements in computing power (for mark–recapture models) and electronic components (for telemetry). Such advances now allow mark–recapture models to take advantage of the detailed information that telemetry techniques can provide. The key feature of mark–recapture models is simultaneous estimation of detection and survival probabilities. With telemetry, a “capture” event consists of detecting a given tag code one or more times at a specific location or time. By contrast, in some studies interest may focus on the probability of detecting a single tag transmission (see Sections 7.2 and 9.1). Compared to conventional mark and recapture methods, telemetry methods often have greater detection probabilities due to large detection ranges, increased “effort” (i.e., continuous monitoring with autonomous receivers), and ability to simultaneously monitor multiple locations. Nonetheless, perfect detectability is rare in telemetry studies because both random (e.g., from electronic noise) and nonrandom processes (e.g., receiver loses power temporarily) can allow a fish to pass a receiver undetected. Failure to account for imperfect detection can lead to serious bias in survival estimates. When using telemetry to estimate survival, it is therefore critical to explicitly estimate detection probabilities to ensure unbiased estimates of survival (see Section 7.2). Fortunately, using telemetry techniques and mark–recapture models together yields the best of both worlds: Well-designed telemetry systems deliver high detection probabilities that result in precise estimates from small sample sizes. Mark–recapture models ensure estimates of the demographic parameters are unbiased with respect to the detection process.

Book chapter↗
USGS2012

Time-to-event analysis as a framework for quantifying fish passage performance

Fish passage is the result of a sequence of processes, whereby fish must approach, enter, and pass a structure. Each of these processes takes time, and fishway performance is best quantified in terms of the rates at which each process is completed. Optimal performance is achieved by maximizing the rates of approach, entry, and passage through safe and desirable routes. Sometimes, however, it is necessary to reduce rates of passage through less desirable routes in order to increase proportions passing through the preferred route. Effectiveness of operational or structural modifications for achieving either of these goals is best quantified by applying time-to-event analysis, commonly known as survival analysis methods, to telemetry data. This set of techniques allows for accurate estimation of passage rates and covariate effects on those rates. Importantly, it allows researchers to quantify rates that vary over time, as well as the effects of covariates that also vary over time. Finally, these methods are able to control for competing risks, i.e., the presence of alternate passage routes, failure to pass, or other fates that remove fish from the pool of candidates available to pass through a particular route. In this chapter, we present a model simulation of telemetered fish passing a hydroelectric dam, and provide step-by-step guidance and rationales for performing time-to-event analysis on the resulting data. We demonstrate how this approach removes bias from performance estimates that can result from using methods that focus only on proportions passing each route. Time-to-event analysis, coupled with multinomial models for measuring survival, provides a comprehensive set of techniques for quantifying fish passage, and a framework from which performance among different sites can be better understood.

Book chapter↗
USGS2011

Swimming and other activities: applied aspects of fish swimming performance

Human activities such as hydropower development, water withdrawals, and commercial fisheries often put fish species at risk. Engineered solutions designed to protect species or their life stages are frequently based on assumptions about swimming performance and behaviors. In many cases, however, the appropriate data to support these designs are either unavailable or misapplied. This article provides an overview of the state of knowledge of fish swimming performance – where the data come from and how they are applied – identifying both gaps in knowledge and common errors in application, with guidance on how to avoid repeating mistakes, as well as suggestions for further study.

Book chapter↗
USGS2010

Fish guidance and passage at barriers

Habitat fragmentation resulting from human activities is a major factor contributing to reductions in biodiversity and species abundance worldwide. When movements are restricted, subpopulations become isolated, leading to reduced breeding opportunities, inbreeding depression, and interruption of key life stages. This problem is particularly ubiquitous in riverine ecosystems, where dams, water diversions, culverts, and other structures create barriers to movements of aquatic organisms. Fragmentation and obstacles to movement can be a natural and important part of riverine ecosystems. The challenge of fish passage is to mitigate for the effects of the barriers by providing passage routes that are both safe and effective. Fish passage technology would greatly benefit from more research on the associations between hydraulics and other environmental stimuli and rheotaxis in migratory fish. Migratory delay, poor attraction, fallback and stalling within fishways, and both immediate and delayed passage-induced mortality are common problems identified for a range of fishway types and taxa.

Book chapter↗
USGS2009

Three-dimensional movement of silver-phase American eels in the forebay of a small hydroelectric facility

Declines in the population of the American eel, Anguilla rostrata , along the northwestern Atlantic have stimulated resource managers to consider the impact of hydroelectric facilities on silver-phase eels as they migrate downstream to the sea. During the fall of 2002, we investigated the movement of migrant eels passing downstream of a small hydroelectric facility on the Connecticut River (Massachusetts). We used three-dimensional acoustic telemetry to monitor fine-scale movement of telemetered silver eels in the forebay (the first 100 m of area directly upstream of the dam). Eel movements were tracked approximately every three seconds, and individual swimming pathways were reconstructed to compare the three-dimensional results with biotelemetry methods previously used at this site; conventional telemetry systems included radio, PIT, and acoustic telemetry. We found that three-dimensional acoustic telemetry provided the necessary fine-scale resolution to characterize dominant movement patterns and locations of passage. Eels were detected at all depths throughout the forebay; however, they spent the greatest proportion of their time near the bottom, with occasional vertical movements to the surface. Eels exhibited a range of movements interpreted to be downstream searching behavior, including altered vertical and horizontal positions at or near the trash racks and various looping movements directly upstream of the trash racks and throughout the entire forebay. A substantial number of these eels (28%) were detected re-entering the acoustic array on multiple dates before passing the station. The majority (89%) were detected passing downstream of the dam through the turbines.

Book chapter↗
USGS2009

Fishway evaluations for better bioengineering: An integrative approach

Effective fishway design requires extensive integration of biological and hydraulic data. Many relevant biological parameters remain poorly characterized, however, and the lack of adequate biological data has long been recognized as a central weakness in fish passage technology. This is of particular concern given the growing recognition of the importance of passing a broad diversity of species. Part of the reason for this weakness is the difficulty of identifying relevant biological, hydraulic, and other physical parameters. We propose that by both exploring questions suggested by current knowledge, and also by increasing the frequency and refining the methods with which fishways are evaluated, two results can be achieved: our understanding of design effectiveness can be improved, and research questions can be prioritized through adaptive management. We describe a framework and rationale for fishway evaluations that identifies several promising avenues of research. Understanding correlates of passage performance is increasingly important as fish passage needs expand on a global scale.

Book chapter↗
USGS2002

Swimming performance of upstream migrant fishes: New methods, new perspectives

The ability to traverse barriers of high water velocity limits the distributions of many diadromous and other migratory fish species, and is central to effective fishway design. This dissertation provides a detailed analysis of volitional sprinting behavior of six migratory fish species (American shad Alosa sapidissima, alewife A. pseudoharengus, blueback herring A. aestivalis, striped bass Morone saxatilis , walleye Stizostedion vitreum, and white sucker Catostomus commersoni), against controlled water velocities of 1.5–4.5 m · s−1 in a large, open-channel flume. In Chapter 1, I develop models of maximum distance traversed ( Dmax) by fish ascending these flows, accounting for water velocity and other covariate effects. I then demonstrate the application of these models, using them to predict proportions of active migrants capable of traversing a range of distances and flow velocities. Chapter 2 focuses on behavior and swimming performance of American shad, analyzing covariate effects on attempt rate as well as Dmax, and formalizing how rate and distance jointly affect overall rates of passage. Models describe a complex pattern of varying responses of attempt rate and Dmax to hydraulics, temperature, effort expended on and recovery time since the previous attempt. In Chapter 3, I use the effect of swimming speed on fatigue time to calculate an optimal swimming speed that maximizes the over-ground distance fish can traverse, and hence defines their maximum ability to traverse velocity barriers. This speed reduces to a constant groundspeed within a given gait, regardless of the speed of flow. Data from all six species support this view, although only American shad exhibit a clear shift from the optimum prolonged speed to the optimum sprint speed at the predicted critical flow velocity. Throughout this dissertation I make extensive and novel use of statistical techniques developed for survival analysis to analyze and model behavioral data, both with respect to attempt rate and to D max. Chapter 4 provides an overview of these methods and demonstrates their application to a fish passage study of downstream-migrating Atlantic salmon (Salmo salar) smolts. An understanding of the principles described here will help the reader to better understand the findings of the previous three chapters.

Thesis↗
USGS2002

Evaluation of the effects of turbulence on the behaviour of migratory fish

The fundamental influence of fluid dynamics on aquatic organisms is receiving increasing attention among aquatic ecologists. For example, the importance of turbulence to ocean plankton has long been a subject of investigation (Peters and Redondo 1997). More recently, studies have begun to emerge that explicitly consider the effects of shear and turbulence on freshwater invertebrates (Statzner et al. 1988; Hart et al. 1996) and fishes (Pavlov et al. 1994, 1995). Hydraulic shear stress and turbulence are interdependent natural hydraulic phenomena that are important to fish, and consequently it is important to develop an understanding of how fish sense, react to, and perhaps utilize these phenomena under normal river flows. The appropriate reaction to turbulence may promote movement of migratory fish (Coutant 1998) or prevent displacement of resident fish. It has been suggested that one of the adverse effects of flow regulation by hydroelectric projects is the reduction of normal turbulence, particularly in the headwaters of reservoirs, which can lead to disorientation and slowing of migration (Williams et al. 1996; Coutant et al. 1997; Coutant 1998). On the other hand, greatly elevated levels of shear and turbulence may be injurious to fish; injuries can range from removal of the mucous layer on the body surface to descaling to torn opercula, popped eyes, and decapitation (Neitzel et al. 2000a,b). Damaging levels of fluid stress, such turbulence, can occur in a variety of circumstances in both natural and man-made environments. This report discusses the effects of shear stress and turbulence on fish, with an emphasis on potentially damaging levels in man-made environments. It defines these phenomena, describes studies that have been conducted to understand their effects, and identifies gaps in our knowledge. In particular, this report reviews the available information on the levels of turbulence that can occur within hydroelectric power plants, and the associated biological effects. Furthermore, this report describes an experimental apparatus designed to test the effect of turbulence on fish, and defines its hydraulics. It gives the results of experiments in which three different fish species were exposed to representative levels of turbulence in the laboratory.

Bonneville Power Administration Report↗