Geology topics

Scott T. Allen

Publications and source records attributed to Scott T. Allen.

8 recordsLinked to original sources

USGS2023

Practical guide to measuring wetland carbon pools and fluxes

Wetlands cover a small portion of the world, but have disproportionate influence on global carbon (C) sequestration, carbon dioxide and methane emissions, and aquatic C fluxes. However, the underlying biogeochemical processes that affect wetland C pools and fluxes are complex and dynamic, making measurements of wetland C challenging. Over decades of research, many observational, experimental, and analytical approaches have been developed to understand and quantify pools and fluxes of wetland C. Sampling approaches range in their representation of wetland C from short to long timeframes and local to landscape spatial scales. This review summarizes common and cutting-edge methodological approaches for quantifying wetland C pools and fluxes. We first define each of the major C pools and fluxes and provide rationale for their importance to wetland C dynamics. For each approach, we clarify what component of wetland C is measured and its spatial and temporal representativeness and constraints. We describe practical considerations for each approach, such as where and when an approach is typically used, who can conduct the measurements (expertise, training requirements), and how approaches are conducted, including considerations on equipment complexity and costs. Finally, we review key covariates and ancillary measurements that enhance the interpretation of findings and facilitate model development. The protocols that we describe to measure soil, water, vegetation, and gases are also relevant for related disciplines such as ecology. Improved quality and consistency of data collection and reporting across studies will help reduce global uncertainties and develop management strategies to use wetlands as nature-based climate solutions.

Wetlands↗

USGS2020

Small gradients in salinity have large effects on stand water use in freshwater wetland forests

Salinity intrusion is responsible for changes to freshwater wetland watersheds globally, but little is known about how wetland water budgets might be influenced by small increments in salinity. We studied a forested wetland in South Carolina, USA, and installed sap flow probes on 72 trees/shrubs along a salinity gradient. Species investigated included the trees baldcypress ( Taxodium distichum [L.] Rich.), water tupelo ( Nyssa aquatica L.), swamp tupelo ( Nyssa biflora Walt.), and the shrub waxmyrtle ( Morella cerifera (L.) Small). This study improves upon past reliance on greenhouse seedling studies by adding measurements of trees/shrubs along a salinity gradient, and better describes the role of low salinity on water use in freshwater wetland forests. We measured patterns of water use related to salinity, atmospheric conditions and season, and hypothesized that salinity would influence wetland forest water use through two mechanisms: salinity disturbances would yield stands with species and size classes that transpire less and individual trees with less conductive xylem tissue (i.e., sapwood). Both hypotheses held. At salinity concentrations ranging from fresh to 3 psu, forest structural changes alone resulted in stand water use reductions from 494 mm year -1 in freshwater stands to 316 mm year -1 in stands of slightly higher salinity. Tree sapwood function (inferred from radial sap flux profiles) also changed along this gradient and reduced sap flow rates by an additional 13.3% per unit increase in salinity (psu). Thus, stand water use was further reduced to 190 mm year -1 on saline sites. We found that forest structure is not the only change that affects water use in salinized watersheds; individual tree eco-physiological responses to salinity, manifesting in different radial sap flow profiles, are important as well.

South Carolina↗

USGS2018

Ecological resilience indicators for mangrove ecosystems

Mangrove ecosystems are coastal wetland ecosystems dominated by mangrove species that are typically found in the intertidal zone, characterized by frequently flooded saline soil conditions. The majority of the approximately 500,000 acres of mangrove ecosystem in the United States occurs in the NGoM, and almost all of that is in Florida, with over 90 percent in the four southern counties of Lee, Collier, Miami-Dade, and Monroe. Scattered stands and individuals occur north and westward into Louisiana and Texas (Osland et al., 2016). The three common mangrove species are: black mangrove (Avicennia germinans), white mangrove (Laguncularia racemosa), and red mangrove (Rhizophora mangle). The mangrove system described in this project includes Tidal Mangrove Shrubland and Tidal Mangrove Forest as classified in CMECS (FGDC, 2012). It is classified as Caribbean Fringe Mangrove (G004) in the USNVC (2016), with a variety of distinct associations, based on species dominance and ecological setting.

Book chapter↗

USGS2018

Ecological resilience indicators for salt marsh ecosystems

Salt marshes are coastal ecosystems within the intertidal zone, characterized by hypoxic, saline, soil conditions and low biodiversity. Low diversity arises from frequent disturbance and stressful conditions (i.e., high salinity and hypoxia), where vegetative reproduction and low competition result in mostly monotypic stands, with some differences in plant community influenced by flooding regime (described below). While there are several types of salt marshes in the Northern Gulf of Mexico (NGoM), ranging from low to high salt marshes and salt flats (Tiner, 2013), Spartina alterniflora–dominated salt marshes in the Coastal and Marine Ecological Classification Standard (CMECS) Low and Intermediate Salt Marsh Biotic Group (FGDC, 2012) are the most extensive and are the focus of this project. These salt marshes are classified as “Gulf Coast Cordgrass Salt Marsh” (CEGL004190; USNVC, 2016). Within the NGoM region, some salt marsh areas are dominated by other species such as Spartina patens and Juncus roemerianus, which both occupy higher elevations in high-precipitation zones (e.g., Louisiana, Alabama, Mississippi, and Florida). In lower precipitation regions (southern Texas), hypersaline conditions often develop yielding communities of succulent salt marsh plants (Batis and Salicornia spp.). In climatic zones with warmer winter temperatures, temperate salt marshes naturally transition to mangrove (generally in the southern Gulf of Mexico range) or, in areas with lower precipitation, to salt flats (generally in western part of the study area).

Gulf of Mexico↗

USGS2016

Hydrologic exchanges and baldcypress water use on deltaic hummocks, Louisiana, USA

Coastal forested hummocks support clusters of trees in the saltwater–freshwater transition zone. To examine how hummocks support trees in mesohaline sites that are beyond physiological limits of the trees, we used salinity and stable isotopes ( 2 H and 18 O) of water as tracers to understand water fluxes in hummocks and uptake by baldcypress ( Taxodium distichum (L.) Rich.), which is the most abundant tree species in coastal freshwater forests of the southeastern U.S. Hummocks were always partially submerged and were completely submerged 1 to 8% of the time during the two studied growing seasons, in association with high water in the estuary. Salinity, δ 18 O, and δ 2 H varied more in the shallow open water than in groundwater. Surface water and shallow groundwater were similar to throughfall in isotopic composition, which suggested dominance by rainfall. Salinity of groundwater in hummocks increased with depth, was higher than in swales, and fluctuated little over time. Isotopic composition of xylem water in baldcypress was similar to the vadose zone and unlike other measured sources, indicating that trees preferentially use unsaturated hummock tops as refugia from higher salinity and saturated soil in swales and the lower portions of hummocks. Sustained upward gradients of salinity from groundwater to surface water and vadose water, and low variation in groundwater salinity and isotopic composition, suggested long residence time, limited exchange with surface water, and that the shallow subsurface of hummocks is characterized by episodic salinization and slow dilution.

Louisiana↗

USGS2016

Wetland tree transpiration modified by river-floodplain connectivity

Hydrologic connectivity provisions water and nutrient subsidies to floodplain wetlands and may be particularly important in floodplains with seasonal water deficits through its effects on soil moisture. In this study, we measured sapflow in 26 trees of two dominant floodplain forest species ( Celtis laevigata and Quercus lyrata ) at two hydrologically distinct sites in the lower White River floodplain in Arkansas, USA. Our objective was to investigate how connectivity-driven water table variations affected water use, an indicator of tree function. Meteorological variables (photosynthetically active radiation and vapor pressure deficit) were the dominant controls over water use at both sites; however, water table variations explained some site differences. At the wetter site, highest sapflow rates were during a late-season overbank flooding event, and no flood stress was apparent. At the drier site, sapflow decreased as the water table receded. The late-season flood pulse that resulted in flooding at the wetter site did not affect the water table at the drier site; accordingly, higher water use was not observed at the drier site. The species generally associated with wetter conditions ( Q. lyrata ) was more positively responsive to the flood pulse. Flood water subsidy lengthened the effective growing season, demonstrating ecological implications of hydrologic connectivity for alleviating water deficits that otherwise reduce function in this humid floodplain wetland.

Arkansas↗

USGS2016

Satellite-derived temperature data for monitoring water status in a floodplain forest of the Upper Sabine River, Texas

Decreased water availability due to hydrologic modifications, groundwater withdrawal, and climate change threaten bottomland hardwood (BLH) forest communities. We used satellite-derived (MODIS) land-surface temperature (LST) data to investigate spatial heterogeneity of canopy temperature (an indicator of plant-water status) in a floodplain forest of the upper Sabine River for 2008–2014. High LST pixels were generally further from the river and at higher topographic locations, indicating lower water-availability. Increasing rainfall-derived soil moisture corresponded with decreased heterogeneity of LST between pixels but there was weaker association between Sabine River stage and heterogeneity. Stronger dependence of LST convergence on rainfall rather than river flow suggests that some regions are less hydrologically connected to the river, and vegetation may rely on local precipitation and other contributions to the riparian aquifer to replenish soil moisture. Observed LST variations associated with hydrology encourage further investigation of the utility of this approach for monitoring forest stress, especially with considerations of climate change and continued river management.

Texas↗

USGS2016

Hydrologic effects on diameter growth phenology for Celtis laevigata and Quercus lyrata in the floodplain of the lower White River, Arkansas

Bottomland hardwood (BLH) forests represent an extensive wetland system in the Mississippi Alluvial Valley and southeastern USA, and it is currently undergoing widespread transition in species composition. One such transition involves increased establishment of sugarberry (Celtis laevigata), and decreased establishment of overcup oak (Quercus lyrata). The ecological mechanisms that control this transition are not well understood. We measured monthly diameter growth with dendrometer bands on 86 sugarberry and 42 overcup oak trees at eight sites in the floodplain of the White River (AR, USA) with differing hydrologic regimes. For both species, growth attenuated earlier at drier sites compared to wetter sites. Overcup oak grew slightly longer through late August, suggesting its growth period extends across both wet and dry periods. In contrast, sugarberry growth rate decreased substantially by mid-July. While these results did not necessarily indicate a mechanism for increased prominence of sugarberry, they suggest sugarberry growing season does not as much coincide with the typically drier period of late summer and may be less affected by these conditions. Overcup oak grows later into the dry season and water table conditions during this period may determine if overcup oak benefits from this relatively extended growth period.

Conference Paper↗