Geology topics

Sasha C. Reed

Publications and source records attributed to Sasha C. Reed.

At least 55 records · Page 3Linked to original sources

USGS2024

Inoculated biocrust cover and functions diverged over a gradient of soil textures and water availability

Restoring biological crust (biocrust) in disturbed drylands is challenging due to the difficult environmental conditions, such as limited soil moisture, low soil nutrients, and extreme temperatures, that impede growth. Understanding how the key components of biocrust—mosses, lichens, and cyanobacteria—react to different environmental factors informs the optimal timing, locations, and species composition for biocrust reintroduction, thereby increasing the likelihood of establishment. Here, we inoculated soils with a diverse range of biocrust organisms, analogous to seeding an area with diverse vascular plant seeds, and varied environmental conditions to observe how these changes influenced the development and functions of reintroduced biocrust. We found that by manipulating soil texture and time spent wet, we can change the proportional cover of biocrust within a restoration-like setting. Specifically, we found that 4 months after inoculation, finer textured soils that received more water become dominated by moss cover, while coarser textured soils with less water remained dominated by cyanobacteria cover, and the interactions between texture and time spent wet strongly influenced cover. We found biocrust morphological group cover had a small, but detectable, effect on ecosystem functions (soil stability and nitrogenase activity, a proxy for nitrogen fixation), but that environmental conditions had a stronger impact on the functions we measured. Manipulative experiments in controlled environments, like this one, can help elucidate the mechanisms underlying the establishment rate and patterns of biocrusts post-inoculation, and inform implementation of inoculations in the field.

New Mexico↗

USGS2024

A conserved interdomain microbial network underpins cadaver decomposition despite environmental variables

Microbial breakdown of organic matter is one of the most important processes on Earth, yet the controls of decomposition are poorly understood. Here we track 36 terrestrial human cadavers in three locations and show that a phylogenetically distinct, interdomain microbial network assembles during decomposition despite selection effects of location, climate and season. We generated a metagenome-assembled genome library from cadaver-associated soils and integrated it with metabolomics data to identify links between taxonomy and function. This universal network of microbial decomposers is characterized by cross-feeding to metabolize labile decomposition products. The key bacterial and fungal decomposers are rare across non-decomposition environments and appear unique to the breakdown of terrestrial decaying flesh, including humans, swine, mice and cattle, with insects as likely important vectors for dispersal. The observed lockstep of microbial interactions further underlies a robust microbial forensic tool with the potential to aid predictions of the time since death.

Nature Microbiology↗

USGS2024

Trajectories and tipping points of piñon–juniper woodlands after fire and thinning

Piñon–juniper (PJ) woodlands are a dominant community type across the Intermountain West, comprising over a million acres and experiencing critical effects from increasing wildfire. Large PJ mortality and regeneration failure after catastrophic wildfire have elevated concerns about the long-term viability of PJ woodlands. Thinning is increasingly used to safeguard forests from fire and in an attempt to increase climate resilience. We have only a limited understanding of how fire and thinning will affect the structure and function of PJ ecosystems. Here, we examined vegetation structure, microclimate conditions, and PJ regeneration dynamics following ~20 years post-fire and thinning treatments. We found that burned areas had undergone a state shift that did not show signs of returning to their previous state. This shift was characterized by (1) distinct plant community composition dominated by grasses; (2) a lack of PJ recruitment; (3) a decrease in the sizes of interspaces in between plants; (4) lower abundance of late successional biological soil crusts; (5) lower mean and minimum daily soil moisture values; (6) lower minimum daily vapor pressure deficit; and (7) higher photosynthetically active radiation. Thinning created distinct plant communities and served as an intermediate between intact and burned communities. More intensive thinning decreased PJ recruitment and late successional biocrust cover. Our results indicate that fire has the potential to create drier and more stressful microsite conditions, and that, in the absence of active management following fire, there may be shifts to persistent ecological states dominated by grasses. Additionally, more intensive thinning had a larger impact on community structure and recruitment than less intensive thinning, suggesting that careful consideration of goals could help avoid unintended consequences. While our results indicate the vulnerability of PJ ecosystems to fire, they also highlight management actions that could be adapted to create conditions that promote PJ re-establishment.

Colorado↗

USGS2024

Tropical forests and global change: Biogeochemical responses and opportunities for cross-site comparisons, an organized INSPIRE session at the 108th Annual Meeting, Ecological Society of America, Portland, Oregon, USA, August 2023

Tropical forests play a critical role in the global carbon (C) cycle. These ecosystems maintain the highest rates of net primary production (NPP) on Earth (Hengl et al ., 2017 ), contain c . 30% of terrestrial C stocks (Jobbagy & Jackson, 2000 ), and have some of the largest stores of fine-root biomass globally (Jackson et al ., 1996 ), as well as higher fine-root production and turnover rates compared with other biomes (Cusack et al ., 2021 ). Tropical forest responses to projected warming, altered rainfall regimes, and elevated CO 2 concentrations (IPCC, 2021 ) are likely to be different from other ecosystems because of their unique characteristics (Box 1 ), making targeted research and model development important for understanding tropical forest–climate feedbacks. There is now a critical mass of long-term global change field experiments and modeling efforts in tropical forests, yet thus far there has been little synthesis, cross-site comparison, or multi-site standardized experimentation among tropical forests to help us understand how these biomes are changing. An organized INSPIRE session at the 108 th Annual Meeting of the Ecological Society of America set out to tackle just this. Speakers covered large-scale tropical forest field experiments and modeling efforts, with an emphasis on changes in ecosystem biogeochemistry under warming, drying, elevated atmospheric CO 2 , and changing nutrient status. In this Meeting report, we provide an overview of the large-scale global change experiments presented and highlight the main objectives and opportunities for tropical forest research that emerged, including cross-site comparisons and integration with ecosystem-scale models (Fig. 1 ).

New Phytologist↗

USGS2024

Reply to comment on "Five decades of observed daily precipitation reveal longer and more variable drought events across much of the western United States"

Paciorek and Wehner raise important questions around our use of the Mann-Kendall nonparametric trend test on smoothed data for analyzing long-term hydrometeorological trends in Zhang et al. (2021, https://doi.org/10.1029/2020gl092293 ). We thank them for initiating this important conversation and their gracious cooperation in exploring the issues addressed in their comment. In this reply we confirm the inflation of significant p -values by our choice to smooth, illustrate the relatively minor impacts on the main conclusions of our paper, and add our voices to those of Paciorek and Wehner in highlighting the lack of methodology for hypothesis testing across multiple stations that have spatial structure (i.e., testing for regionally consistent trends).

western United States↗

USGS2024

Dryland soil recovery after disturbance across soil and climate gradients of the Colorado Plateau

Drylands impacted by energy development often require costly reclamation activities to reconstruct damaged soils and vegetation, yet little is known about the effectiveness of reclamation practices in promoting recovery of soil quality due to a lack of long-term and cross-site studies. Here, we examined paired on-pad and adjacent undisturbed off-pad soil properties over a 22-year chronosequence of 91 reclaimed oil or gas well pads across soil and climate gradients of the Colorado Plateau in the southwestern United States. Our goals were to estimate the time required for soil properties to reach undisturbed conditions, examine the multivariate nature of soil quality following reclamation, and identify environmental factors that affect reclamation outcomes. Soil samples, collected in 2020 and 2021, were analyzed for biogeochemical pools (total nitrogen, and total organic and inorganic carbon), chemical characteristics (salinity, sodicity, pH), and texture. Predicted time to recovery across all sites was 29 years for biogeochemical soil properties, 31 years for soil chemical properties, and 6 years for soil texture. Ordination of soil properties revealed differences between on- and off-pad soils, while site aridity explained variability in on-pad recovery. The predicted time to total soil recovery (distance between on- and off-pad in ordination space) was 96 years, which was longer than any individual soil property. No site reached total recovery, indicating that individual soil properties alone may not fully indicate recovery in soil quality as soil recovery does not equal the sum of its parts. Site aridity was the largest predictor of reclamation outcomes, but the effects differed depending on soil type. Taken together, results suggest the recovery of soil quality - which reflects soil fertility, carbon sequestration potential, and other ecosystem functions - was influenced primarily by site setting, with soil type and aridity major mediators of on-pad carbon, salinity, and total soil recovery following reclamation.

Colorado, Utah↗

USGS2024

Drivers of woody dominance across global drylands

Increases in the abundance of woody species have been reported to affect the provisioning of ecosystem services in drylands worldwide. However, it is virtually unknown how multiple biotic and abiotic drivers, such as climate, grazing, and fire, interact to determine woody dominance across global drylands. We conducted a standardized field survey in 304 plots across 25 countries to assess how climatic features, soil properties, grazing, and fire affect woody dominance in dryland rangelands. Precipitation, temperature, and grazing were key determinants of tree and shrub dominance. The effects of grazing were determined not solely by grazing pressure but also by the dominant livestock species. Interactions between soil, climate, and grazing and differences in responses to these factors between trees and shrubs were key to understanding changes in woody dominance. Our findings suggest that projected changes in climate and grazing pressure may increase woody dominance in drylands, altering their structure and functioning.

Science Advances↗

USGS2023

Respiratory acclimation of tropical forest roots in response to in situ experimental warming and hurricane disturbance

Climate projections predict higher temperatures and more frequent hurricanes in the tropics. Tropical plants subjected to these stresses may respond by acclimating their physiology. We investigated tropical forest root respiration in response to in situ experimental warming and hurricane disturbance in eastern Puerto Rico. We measured mass-normalized root specific respiration, root biomass, and root traits at the Tropical Responses to Altered Climate Experiment (TRACE), where understory vegetation is warmed + 4 °C above ambient. Our measurements span 5 years, including before and after two major hurricanes, to quantify root contributions to ecosystem carbon fluxes. Experimental warming did not affect root specific respiration at a standard temperature of 25° (RSR 25 , mean = 3.89 nmol CO 2 g −1 s −1 ) or the temperature sensitivity of root respiration (Q 10 , mean = 1.75), but did result in decreased fine-root biomass, thereby decreasing area-based estimations of ecosystem-level root respiration in warmed plots by ~ 35%. RSR 25 of newer roots, which increased with increasing root nitrogen, showed greater rates 6 months after the hurricanes, but subsequently decreased after 12 months. Root specific respiration did not acclimate to higher temperatures, based on lack of adjustments in either Q 10 or RSR 25 in the warmed plots; however, decreased root biomass indicates the root contribution to soil carbon dioxide efflux was overall lower with warming. Lower root biomass may also limit nutrient and water uptake, having potential negative effects on carbon assimilation. Our results show that warming and hurricane disturbance have strong potential to affect tropical forest roots, as well as ecosystem carbon fluxes.

Ecosystems↗

USGS2023

Cultivating resilience in dryland soils: An assisted migration approach to biological soil crust restoration

Land use practices and climate change have driven substantial soil degradation across global drylands, impacting ecosystem functions and human livelihoods. Biological soil crusts, a common feature of dryland ecosystems, are under extensive exploration for their potential to restore the stability and fertility of degraded soils through the development of inoculants. However, stressful abiotic conditions often result in the failure of inoculation-based restoration in the field and may hinder the long-term success of biocrust restoration efforts. Taking an assisted migration approach, we cultivated biocrust inocula sourced from multiple hot-adapted sites (Mojave and Sonoran Deserts) in an outdoor facility at a cool desert site (Colorado Plateau). In addition to cultivating inoculum from each site, we created an inoculum mixture of biocrust from the Mojave Desert, Sonoran Desert, and Colorado Plateau. We then applied two habitat amelioration treatments to the cultivation site (growth substrate and shading) to enhance soil stability and water availability and reduce UV stress. Using marker gene sequencing, we found that the cultivated mixed inoculum comprised both local- and hot-adapted cyanobacteria at the end of cultivation but had similar cyanobacterial richness as each unmixed inoculum. All cultivated inocula had more cyanobacterial 16S rRNA gene copies and higher cyanobacterial richness when cultivated with a growth substrate and shade. Our work shows that it is possible to field cultivate biocrust inocula sourced from different deserts, but that community composition shifts toward that of the cultivation site unless habitat amelioration is employed. Future assessments of the function of a mixed inoculum in restoration and its resilience in the face of abiotic stressors are needed to determine the relative benefit of assisted migration compared to the challenges and risks of this approach.

Arizona, California, Utah↗

USGS2023

Unraveling mechnisms underlying effects of wetting–drying cycles on soil respiration in a dryland

Rewetting of dry soils usually stimulates soil carbon (C) emission, a phenomenon known as the Birch effect. Soil C cycling in drylands, which store approximately one third of terrestrial soil organic C (SOC), is strongly affected by wetting–drying cycles. However, the physical, chemical, and biological mechanisms that link rewetting cycles with dryland soil C cycling have not been comprehensively studied, nor do we understand how these mechanisms interact with each other. Here, we conducted a dryland soil incubation experiment manipulating four factors related to global change (soil moisture content, soil moisture variability, C availability, and prior warming) in a factorial design. The experiment was divided into two periods: a rewetting period consisting of six 14-d wetting–drying cycles; and a recovery period lasting 28 days during which soil moisture content was held stable, allowing for examination of the legacy effects of the wet-dry cycles. Rewetting cycles decreased soil aggregate stability under some conditions, but their effects on soil microbial biomass and fungal communities, soil enzyme activities, soil priming, and soil dissolved C were not significant. We found lower average soil respiration under the wetting–drying treatment than the stable soil moisture treatment, and Birch effects were observed, but only under some conditions. This was probably because moisture variability exacerbated soil microbial metabolic stress, which showed itself as oxygen limitation during the initial precipitation pulse and as water limitation during soil drying. Notably, respiration rates remained low even after moisture fluctuations ceased, suggesting a legacy effect of rewetting cycles on dryland microbial communities. Overall, rewetting inhibited aggregate formation (physical mechanism), and suppressed soil respiration by inducing soil microbial metabolic stress (biological mechanism), ultimately leading to lower soil C loss under rewetting. Our findings indicate that Birch effects are mediated by the magnitude of moisture variability, the availability of C, and the degree of physiological stress microbes experience.

Biogeochemistry↗

USGS2023

Time, climate, and soil settings set the course for reclamation outcomes following dryland energy development

Soil attributes, climate, and time since reclamation have important implications for oil and gas reclamation success on drylands. It is uncertain if reclaimed well pads, on highly degraded drylands, can successfully regain ecological function or meet indicator benchmarks for reclamation. Here, our goals were to assess patterns in reclamation outcomes relative to (1) soil attributes, climate, and time since reclamation; and (2) plant and soil reference benchmarks. We collected a suite of plant, soil, and landscape characteristics from 134 reclaimed well pads on the Colorado Plateau that spanned climate and soil gradients and ranged from 2 to 20 years post-reclamation, then compared characteristics to those from 583 reference plots. On the reclaimed pads, less saline soils, more mesic climates, and longer time since reclamation were associated with favorable reclamation outcomes based on metrics of plant species richness and diversity, plant structure, and cover of important plant functional groups. However, most pads had major departures in 1/4 indicators, suggesting unsuccessful reclamation. Arid warm locations with shallow soils had the greatest percentage of major departures, and noxious plant richness had the greatest departures across soil and climate settings. Our assessment indicates reclamation is failing in key metrics for most pads, and the results highlight the role of environmental conditions in driving reclamation outcomes. These new insights are valuable for ascertaining possible reclamation outcomes and success rates following energy related disturbance, including orphaned wells and renewable energy development. Importantly, the approach used here has applicability for setting benchmarks and outcome standards.

Land Degradation and Development↗

USGS2023

Assessing community assembly controls over community-scale nutrient resorption responses to nitrogen deposition

Nutrient resorption is a fundamental physiological process in plants, with important ecological controls over numerous ecosystem functions. However, the role of community assembly in driving responses of nutrient resorption to perturbation remains largely unknown. Following the Price equation framework and the Community Assembly and Ecosystem Function framework, we quantified the contribution of species loss, species gain, and shared species to the reduction of community-level nutrient resorption efficiency in response to multi-level nitrogen (N) addition in a temperate steppe, after continuous N addition for seven years. Reductions of both N and phosphorus (P) resorption efficiency (NRE and PRE, respectively) were positively correlated with N addition levels. The dissimilarities in species composition between N-enriched and control communities increased with N addition levels, and N-enriched plots showed substantial species losses and gains. Interestingly, the reduction of community-scale NRE and PRE mostly resulted from N-induced decreases in resorption efficiency for the shared species in the control and N-enriched communities. There were negative correlations between the contributions of species richness effect and species identity effect and between the number and identity of species gained for the changes in both NRE and PRE following N enrichment. By simultaneously considering N-induced changes in species composition and in species-level resorption, our work presents a more complete picture of how different community assembly processes contribute to N-induced changes in community-level resorption.

Oecologia↗

USGS2023

Thermography captures the differential sensitivity of dryland functional types to changes in rainfall event timing and magnitude

Drylands of the southwestern United States are rapidly warming, and rainfall is becoming less frequent and more intense, with major yet poorly understood implications for ecosystem structure and function. Thermography-based estimates of plant temperature can be integrated with air temperature to infer changes in plant physiology and response to climate change. However, very few studies have evaluated plant temperature dynamics at high spatiotemporal resolution in rainfall pulse-driven dryland ecosystems. We address this gap by incorporating high-frequency thermal imaging into a field-based precipitation manipulation experiment in a semi-arid grassland to investigate the impacts of rainfall temporal repackaging. All other factors held constant, we found that fewer/larger precipitation events led to cooler plant temperatures (1.4°C) compared to that of many/smaller precipitation events. Perennials, in particular, were 2.5°C cooler than annuals under the fewest/largest treatment. We show these patterns were driven by: increased and consistent soil moisture availability in the deeper soil layers in the fewest/largest treatment; and deeper roots of perennials providing access to deeper plant available water. Our findings highlight the potential for high spatiotemporal resolution thermography to quantify the differential sensitivity of plant functional groups to soil water availability. Detecting these sensitivities is vital to understanding the ecohydrological implications of hydroclimate change.

New Phytologist↗

USGS2023

Storms and pH of dam releases affect downstream phosphorus cycling in an arid regulated river

Reservoirs often bury phosphorus (P), leading to seasonal or persistent reductions in P supply to downstream rivers. Here we ask if observed variation in the chemistry of dam release waters stimulates downstream sediment P release and biological activity in an arid, oligotrophic system, the Colorado River below Lake Powell, Arizona, USA. We use bottle incubations to simulate a range of observed pH (6–8.8) and oxygen (0–9.4 mg L −1 ) levels, with the hypothesis that either oxygen concentrations or pH regulates P release from sediments to the water column. We found support for pH-mediated P release from calcite across the three sites we sampled. The magnitude of this effect was lower in bottles filled with tailwater sediment, but at downriver sites low pH resulted in declining water column dissolved inorganic nitrogen:soluble reactive P (DIN:SRP) ratios, which dropped below the Redfield ratio of 16:1, increasing water column total protein production, and down-regulating alkaline phosphatase production. Additional 7-day incubations showed that tributary storm inputs can temporarily elevate riverine P availability from < 1.5 µg L −1 total dissolved P (TDP) pre-storm to 6.7 µg L −1 TDP post storm. Taken together, our lab incubation and long-term observational results highlight the importance of pH, and ultimately reservoir management and storm dynamics, in regulating P availability and biological processes both now and into the future.

Biogeochemistry↗

USGS2023

Community for data integration 2019 project report

The U.S. Geological Survey Community for Data Integration annually supports small projects focusing on data integration for interdisciplinary research, innovative data management, and demonstration of new technologies. This report provides a summary of the 14 projects supported in fiscal year 2019 and outlines their goals, activities, and accomplishments. Proposals in 2019 were encouraged to address the optional disciplinary theme of biosurveillance of emerging invasive species and health threats.

Open-File Report↗

USGS2023

Droughting a megadrought: Ecological consequences of a decade of experimental drought atop aridification on the Colorado Plateau

Global dryland vegetation communities will likely change as ongoing drought conditions shift regional climates towards a more arid future. Additional aridification of drylands can impact plant and ground cover, biogeochemical cycles, and plant-soil feedbacks, yet how and when these crucial ecosystem components will respond to drought intensification requires further investigation. Using a long-term precipitation reduction experiment (35% reduction) conducted across the Colorado Plateau and spanning ten years into a 20+ year regional megadrought, we explored how vegetation cover, soil conditions, and growing season nitrogen (N) availability are impacted by drying climate conditions. We observed large declines for all dominant plant functional types (C 3 and C 4 grasses and C 3 and C 4 shrubs) across measurement period, both in the drought treatment and control plots, likely due to ongoing regional megadrought conditions. In experimental drought plots, we observed less plant cover, less biological soil crust cover, warmer and drier soil conditions, and more soil resin-extractable N compared to the control plots. Observed increases in soil N availability were best explained by a negative correlation with plant cover regardless of treatment, suggesting that declines in vegetation N uptake may be driving increases in available soil N. However, in ecosystems experiencing long-term aridification, increased N availability may ultimately result in N losses if soil moisture is consistently too dry to support plant and microbial N immobilization and ecosystem recovery. These results show dramatic, worrisome declines in plant cover with long-term drought. Additionally, this study highlights that more plant cover losses are possible with further drought intensification, and underscore that, in addition to large drought effects on aboveground communities, drying trends drive significant changes to critical soil resources such as N availability, all of which could have long-term ecosystem impacts for drylands.

Global Change Biology↗

USGS2023

Long-term relationships between seed bank communities and wildfire across four North American desert sites

It is well documented that the recovery of dryland plant communities following wildfire can be variable, and that legacies of fire can have long-lasting effects on aboveground plant communities. However, our understanding of the degree to which dryland soil seed banks, or the viable seeds in situ, are impacted by fire and their subsequent postfire succession remains extremely poor. To address this important knowledge gap, we used a time-since-fire approach to investigate soil seed bank community changes approximately 15 and 30 years after wildfire and to determine the influence of microsites (e.g., shrub vs. interspace) on seed bank composition. We assessed soil seed bank metrics across four North American deserts, including two cold desert sites (Colorado Plateau and Great Basin) and two warm desert sites (Chihuahuan and Sonoran). In greenhouse emergence trials, we found that seed bank characteristics diverged between warm and cold desert sites, such that warm desert sites had seed banks dominated by annual plants while our cold desert sites had seed banks with greater proportions of perennial species, regardless of fire history. In cold desert sites, fire significantly altered seed bank species composition even 30 years after fire. Shrub versus interspace microsites had no observed influence on seed bank composition in any desert. However, seed bank species richness was greater under shrubs in both warm deserts. Non-native species were present in the seed banks of all deserts and some were particularly abundant in the burned sites. Despite the presence of native species in both burned and unburned seed banks, the presence of non-native species suggests some degree of vulnerability to future disturbances because fire can create amplifying feedback with many non-native plants. Our results highlight strong differences in fires' relationship with seed banks for warm and cold desert sites and lend insight into how fire relates to the composition and diversity of the seeds that play a fundamental role in future plant communities.

Arizona, Colorado, Nevada, New Mexico↗

USGS2023

Soil surface treatments and precipitation timing determine seedling development across southwestern US restoration sites

Restoration in dryland ecosystems often has poor success due to low and variable water availability, degraded soil conditions, and slow plant community recovery rates. Restoration treatments can mitigate these constraints but, because treatments and subsequent monitoring are typically limited in space and time, our understanding of their applicability across broader environmental gradients remains limited. To address this limitation, we implemented and monitored a standardized set of seeding and soil surface treatments (pits, mulch, and ConMod artificial nurse plants) designed to enhance soil moisture and seedling establishment across RestoreNet, a growing network of 21 diverse dryland restoration sites in the southwestern USA over 3 years. Generally, we found that the timing of precipitation relative to seeding and the use of soil surface treatments were more important in determining seeded species emergence, survival, and growth than site-specific characteristics. Using soil surface treatments in tandem with seeding promoted up to 3× greater seedling emergence densities compared with seeding alone. The positive effect of soil surface treatments became more prominent with increased cumulative precipitation since seeding. The seed mix type with species currently found within or near a site and adapted to the historical climate promoted greater seedling emergence densities compared with the seed mix type with species from warmer, drier conditions expected to perform well under climate change. Seed mix and soil surface treatments had a diminishing effect as plants developed beyond the first season of establishment. However, we found strong effects of the initial period seeded and of the precipitation leading up to each monitoring date on seedling survival over time, especially for annual and perennial forbs. The presence of exotic species exerted a negative influence on seedling survival and growth, but not initial emergence. Our findings suggest that seeded species recruitment across drylands can generally be promoted, regardless of location, by (1) incorporation of soil surface treatments, (2) employment of near-term seasonal climate forecasts, (3) suppression of exotic species, and (4) seeding at multiple times. Taken together, these results point to a multifaceted approach to ameliorate harsh environmental conditions for improved seeding success in drylands, both now and under expected aridification.

Ecological Applications↗