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Roy E. Petrakis

Publications and source records attributed to Roy E. Petrakis.

At least 19 recordsLinked to original sources
USGS2026

Satellite time series analysis to quantify changing climax ciénegas using a state and transition model approach

Ciénegas are rare wetlands in arid landscapes of the North American Southwest, historically providing critical ecological and hydrological functions but increasingly threatened by changing climate and land use pressures. This study quantifies changes in ciénega condition and floodplain dynamics using a state-and-transition model (STM) informed by expert knowledge and remote sensing. Key factors include woody plant encroachment, water availability, and soil aggradation. We mapped 31 ciénegas with high-resolution imagery and analyzed Landsat data (1985–2023) to assess vegetation health and moisture using the Normalized Difference Vegetation Index (NDVI) and Normalized Difference Infrared Index (NDII). Results show substantial interannual variability in phenology, water stress, and soil moisture, with regional drying and elevation strongly influencing ciénega resilience. We classified ciénegas into three functional states—healthy, desiccated, and dormant—and mapped their 2023 condition. Trend analyses indicate most ciénegas exhibit greening despite drought, though localized variability underscores the need for site-specific management. None are in a stable climax (reference) state; rather, they transition among states in response to external drivers. Increasing woody plant cover and surface drying, likely linked to declining regional water tables, favor deep-rooted species over wetland grasses—a pattern mirrored in adjacent control plots. Spatially explicit analysis revealed intra-ciénega variability often masked by aggregated data, highlighting the importance of high-resolution monitoring. Seasonal and long-term trends provide context for understanding ciénega dynamics, including degradation and restoration pathways. This study emphasizes the importance of groundwater conservation and demonstrates how remote sensing supports long-term monitoring. The STM framework offers a practical tool for adaptive management to sustain freshwater resources in arid environments.

Arizona, New Mexico↗
USGS2026

Regreening, restoring, and reconnecting a southwestern wetland ecosystem – the Zeedyk wetland

Alluvial wetland ecosystems are vital as biodiversity hotspots but are increasingly threatened by anthropogenic stressors and drought. These pressures are especially acute in arid and semi-arid regions, where eco-hydrologic connectivity is fragile and recovery is slow. This study quantifies the efficacy of nature-based solutions, particularly the ‘Zeedyk approach,’ which employs low-tech Natural Infrastructure in Dryland Streams (NIDS)—including rock detention structures—to slow surface water, raise groundwater tables, and restore wetland function at a spring-fed wetland in Cebolla Canyon, New Mexico, U.S.A. Our results depict a Restoration Feedback Loop that captures stages of change from a healthy wetland in 1935, altered by 20th-century agriculture and grazing, to the re-establishment of the historical flow regime by 2024 documented through an 89-year archive of aerial imagery (1935–2024). By the end of our study period, the Spring-Fed Wetland had expanded by roughly 229% of the original 1935 area, to 4.13 ha. Using 40 years of satellite data, we assess changes in vegetation and hydrology with remote sensing indices. Spatial and temporal analyses reveal significant increases in vegetation greenness and wetness, particularly in an Expanded Wetland subregion, which exhibited ∼3.5x higher wetness and ∼1.5x higher greenness trends compared to adjacent areas. Monthly metrics highlight seasonal variability, with increases in greenness linked to monsoonal rainfall and lateral water redistribution, indicating that restoration impacts extend beyond the primary wetland. This study demonstrates the utility of cloud-based platforms like Google Earth Engine and USGS EarthExplorer for long-term monitoring of wetland restoration, while quantifying the efficacy of the ‘Zeedyk approach’ and demonstrating its potential as a scalable method to restore and conserve wetland meadows in other arid and semi-arid landscapes.

New Mexico↗
USGS2024

An ensemble mean method for remote sensing of actual evapotranspiration to estimate water budget response across a restoration landscape

Estimates of actual evapotranspiration (ETa) are valuable for effective monitoring and management of water resources. In areas that lack ground-based monitoring networks, remote sensing allows for accurate and consistent estimates of ETa across a broad scale—though each algorithm has limitations (i.e., ground-based validation, temporal consistency, spatial resolution). We developed an ensemble mean ETa (EMET) product to incorporate advancements and reduce uncertainty among algorithms (e.g., energy-balance, optical-only), which we use to estimate vegetative water use in response to restoration practices being implemented on the ground using management interventions (i.e., fencing pastures, erosion control structures) on a private ranch in Baja California Sur, Mexico. This paper describes the development of a monthly EMET product, the assessment of changes using EMET over time and across multiple land use/land cover types, and the evaluation of differences in vegetation and water distribution between watersheds treated by restoration and their controls. We found that in the absence of a ground-based monitoring network, the EMET product is more robust than using a single ETa data product and can augment the efficacy of ETa-based studies. We then found increased ETa within the restored watershed when compared to the control sites, which we attribute to increased plant water availability.

Baja California Sur↗
USGS2024

Mapping riparian vegetation response to climate change on the San Carlos Apache Reservation and Upper Gila River watershed to inform restoration priorities: 1935 to Present

The riparian vegetation within the San Carlos Apache Reservation (hereafter Reservation), within the Upper Gila River watershed extending from southwestern New Mexico into southeastern Arizona, provides immense ecological and cultural value to the people of the San Carlos Apache Tribe (hereafter referred to as the Tribe/Tribal) but has experienced substantial changes and stresses over the past century because of fluctuations in climate and a series of human-induced and natural disturbances. This research addresses these challenges by analyzing the riparian vegetation within the Upper Gila River watershed using aerial and satellite imagery, and by documenting the direct relationship to fluctuations in climate conditions. Results from this study would be provided to the Tribe to help the Tribe develop a restoration plan for their riparian forests. We show that the riparian vegetation has largely increased overall in greenness throughout the study period (i.e., 1985 through 2021), despite periods of drought conditions. This extends to the end of our study period particularly with native vegetation in the upper watershed. However, non-native and invasive tamarisk vegetation within much of the lower watershed has shown declining trends and increasing vegetative stress. Furthermore, these areas have experienced a large increase in wildfire presence and other disturbances. Nevertheless, Tribal restoration applications have been shown to increase native vegetation plant cover, suggesting that restoration activities have been successful overall.

Arizona, New Mexico↗
USGS2023

Riparian vegetation response amid variable climate conditions across the Upper Gila River watershed: Informing Tribal restoration priorities

Riparian systems across the Southwest United States are extremely valuable for the human and ecological communities that engage with them. However, they have experienced substantial changes and stresses over the past century, including non-native vegetation expansion, vegetation die-offs, and increased fire activity. Vegetation management approaches, such as ecological restoration, may address some of these stressors as well as reduce the risk of future impacts. We apply remote sensing to inform restoration priorities along the upper Gila River within the San Carlos Apache Reservation and Upper Gila River watershed. First, we develop a spatially and temporally explicit trend analysis across three observed climate periods (1985–1993, 1993–2014, 2014–2021) using the Landsat-derived indices to quantify changes in riparian vegetation conditions. These maps can be used to identify areas potentially more at risk for degradation. Second, we analyze changes in riparian vegetation within a climate framework to better understand trends and the potential effect of climate change. Vegetation greenness has largely increased throughout the watershed despite intensifying drought conditions across our study period, though areas within the lower watershed have shown increased stress and higher rates of wildfire and other disturbances over the past 5-years. Nevertheless, small-scale restoration activities appear to show improving vegetation conditions, suggesting efficacy of these restoration activities. Results from this study may be integrated with restoration objectives to develop a restoration plan that will help riparian vegetation communities adapt to change.

Arizona↗
USGS2023

Riparian vegetation response amid variable climate conditions across the Upper Gila River watershed: informing Tribal restoration priorities

Restoring degraded river systems is an enormous challenge, especially given the uncertainty in a time of climate change. Here, Roy Petrakis explains how restoration approaches informed by remote sensing and a climate adaptation framework increase the potential for overall success. He discusses research being done on the Gila River as a case study of how it might work.

Arizona, New Mexico↗
USGS2022

Analysis of surface water trends for the conterminous United States using MODIS satellite data, 2003–2019

Satellite imagery is commonly used to map surface water extents over time, but many approaches yield discontinuous records resulting from cloud obstruction or image archive gaps. We applied the Dynamic Surface Water Extent (DSWE) model to downscaled (250-m) daily Moderate Resolution Imaging Spectroradiometer (MODIS) data in Google Earth Engine to generate monthly surface water maps for the conterminous United States (US) from 2003 through 2019. The aggregation of daily observations to monthly maps of maximum water extent produced records with diminished cloud and cloud shadow effects across most of the country. We used the continuous monthly record to analyze spatiotemporal surface water trends stratified within Environmental Protection Agency Ecoregions. Although not all ecoregion trends were significant ( p < 0.05), results indicate that much of the western and eastern US underwent a decline in surface water over the 17-year period, while many ecoregions in the Great Plains had positive trends. Trends were also generated from monthly streamgage discharge records and compared to surface water trends from the same ecoregion. These approaches agreed on the directionality of trend detected for 54 of 85 ecoregions, particularly across the Great Plains and portions of the western US, whereas trends were not congruent in select western deserts, the Great Lakes region, and the southeastern US. By describing the geographic distribution of surface water over time and comparing these records to instrumented discharge data across the conterminous US, our findings demonstrate the efficacy of using satellite imagery to monitor surface water dynamics and supplement traditional instrumented monitoring.

Water Resources Research↗
USGS2022

DSWEmod - The production of high-frequency surface water map composites from daily MODIS images

Optical satellite imagery is commonly used for monitoring surface water dynamics, but clouds and cloud shadows present challenges in assembling complete water time series. To test whether the daily revisit rate of Moderate Resolution Imaging Spectroradiometer (MODIS) satellite imagery can reduce cloud obstruction and improve high-frequency surface water mapping, we compared map results derived from Landsat (30-m) and MODIS (250-m) data across the state of California for 2003–2019. We adapted the Dynamic Surface Water Extent (DSWE) model in Google Earth Engine to generate surface water map composites from MODIS imagery every 5, 10, 15, and 30 days, and compared products to monthly Landsat-based DSWE maps. Results for DSWEmod (DSWE MODIS) in California suggest that more than 5% data loss (cloud obstruction, etc.) was present in only 2% of the 15-day time series, as compared to 32% of the monthly Landsat DSWE time series. The five-day DSWEmod composites averaged 8.4% obscuration in the winter months. Area estimates derived from cloud-filtered MODIS and Landsat monthly products have the highest linear correlations compared to streamgage discharge records, suggesting that monthly scale analyses best explain the relationship between surface water area and general streamflow dynamics. Shorter-interval DSWEmod products have lower correlations but utility for understanding the timing of surface water peaks and past flood events.

Journal of the American Water Resources Associatio↗
USGS2021

Hierarchical clustering for paired watershed experiments: Case study in southeastern Arizona, U.S.A.

Watershed studies are often onerous due to a lack of data available to portray baseline conditions with which to compare results of monitoring environmental effects. A paired-watershed approach is often adopted to simulate baseline conditions in an adjacent watershed that can be comparable but assumes there is a quantifiable relationship between the control and treated watersheds. Finding suitably matched pairs that can most accurately depict similar responses is challenging and attributes are rarely quantified. In southeastern Arizona, United States, researchers are investigating the effectiveness of watershed restoration techniques employed by land managers. We selected Smith Canyon to develop a rigorous and quantitatively defensible paired-watershed experimental design. The Smith Canyon watershed consists of 91 structurally similar sub-basins that have a defined basin-like structure and flow channel, allowing for consideration as replicate units. We developed a statistical approach to group sub-basins based on similar structural, biophysical, and hydrologic traits. Our geospatial database consisted of 35 environmental variables, which we reduced to 12 through a correlation analysis. We identified three primary collections of paired sub-basins within the larger watershed. These clusters are being used to inform studies actively being employed in the watershed. Overall, we propose a hierarchical clustering protocol for justification of watershed pairing experiments.

Arizona↗
USGS2020

Mapping perceived social values to support a respondent-defined restoration economy: Case study in southeastern Arizona, USA

Investment in conservation and ecological restoration depends on various socioeconomic factors and the social license for these activities. Our study demonstrates a method for targeting management of ecosystem services based on social values, identified by respondents through a collection of social survey data. We applied the Social Values for Ecosystem Services (SolVES) geographic information systems (GIS)-based tool in the Sonoita Creek watershed, Arizona, to map social values across the watershed. The survey focused on how respondents engage with the landscape, including through their ranking of 12 social values (eg, recreational, economic, or aesthetic value) and their placement of points on a map to identify their associations with the landscape. Additional information was elicited regarding how respondents engaged with water and various land uses, as well as their familiarity with restoration terminology. Results show how respondents perceive benefits from the natural environment. Specifically, maps of social values on the landscape show high social value along streamlines. Life-sustaining services, biological diversity, and aesthetics were the respondents’ highest rated social values. Land surrounding National Forest and private lands had lower values than conservation-based and state-owned areas, which we associate with landscape features. Results can inform watershed management by allowing managers to consider social values when prioritizing restoration or conservation investments.

Arizona↗
USGS2020

Implementation of a surface water extent model in Cambodia using cloud-based remote sensing

Mapping surface water over time provides the spatially explicit information essential for hydroclimatic research focused on droughts and flooding. Hazard risk assessments and water management planning also rely on accurate, long-term measurements describing hydrologic fluctuations. Stream gages are a common measurement tool used to better understand flow and inundation dynamics, but gage networks are incomplete or non-existent in many parts of the world. In such instances, satellite imagery may provide the only data available to monitor surface water changes over time. Here, we describe an effort to extend the applicability of the USGS Dynamic Surface Water Extent (DSWE) model to non-US regions. We leverage the multi-decadal archive of the Landsat satellite in the Google Earth Engine (GEE) cloud-based computing platform to produce and analyze 372 monthly composite maps and 31 annual maps (January 1988–December 2018) in Cambodia, a flood-prone country in Southeast Asia that lacks a comprehensive stream gage network. DSWE relies on a series of spectral water indices and elevation data to classify water into four categories of water inundation. We compared model outputs to existing surface water maps and independently assessed DSWE accuracy at discrete dates across the time series. Despite considerable cloud obstruction and missing imagery across the monthly time series, the overall accuracy exceeded 85% for all annual tests. The DSWE model consistently mapped open water with high accuracy, and areas classified as “high confidence” water correlate well to other available maps at the country scale. Results in Cambodia suggest that extending DSWE globally using a cloud computing framework may benefit scientists, managers, and planners in a wide array of applications across the globe.

Remote Sensing↗
USGS2019

Integrating stream gage data and Landsat imagery to complete time-series of surface water extents in Central Valley, California

Accurate monitoring of surface water location and extent is critical for the management of diverse water resource phenomena. The multi-decadal archive of Landsat satellite imagery is punctuated by missing data due to cloud cover during acquisition times, hindering the assembly of a continuous time series of inundation dynamics. This study investigated whether streamflow volume measurements could be integrated with satellite data to fill gaps in monthly surface water chronologies for the Central Valley region of California, USA, from 1984 to 2015. We aggregated measurements of maximum monthly water extent within each of the study area’s 50 8-digit hydrologic unit code [HUC] watersheds from two Landsat-derived datasets: the European Commission’s Joint Research Centre (JRC) Monthly Water History and the U.S. Geological Survey Dynamic Surface Water Extent (DSWE). We calculated Spearman rank correlation coefficients between water extent values in each HUC and streamflow discharge data. Linear regression fits of the water extent/streamflow data pairs with the highest correlations served as the basis for interpolation of missing imagery surface water values on a HUC-wise basis. Results show strong (ρ > 0.7) maximum correlations in 11 (22.4%) and 25 (51.0%) HUCs for the DSWE and JRC time series, respectively, when comparisons were restricted to imagery and gages co-located in each HUC. Strong maximum correlations occurred in 39 (79.6%; DSWE) and 42 (85.7%; JRC) HUCs when imagery was paired with discharge data from any study area gage, providing a solid basis for reconstruction of water extent values. We generated continuous time series of 30+ years in 35 HUCs, demonstrating that this technique can provide quantitative estimates of historical surface water extents and elucidate flooding or drought events over the period of data collection. Results of a non-parametric trend analysis of the long-term time series on an annual, seasonal, and monthly basis varied among HUCs, though most trends indicate an increase in surface water over the past 30 years.

California↗
USGS2018

Evaluating and monitoring forest fuel treatments using remote sensing applications in Arizona, U.S.A.

The practice of fire suppression across the western United States over the past century has led to dense forests, and when coupled with drought has contributed to an increase in large and destructive wildfires. Forest management efforts aimed at reducing flammable fuels through various fuel treatments can help to restore frequent fire regimes and increase forest resilience. Our research examines how different fuel treatments influenced burn severity and post-fire vegetative stand dynamics on the San Carlos Apache Reservation, in east-central Arizona, U.S.A. Our methods included the use of multitemporal remote sensing data and cloud computing to evaluate burn severity and post-fire vegetation conditions as well as statistical analyses. We investigated how forest thinning, commercial harvesting, prescribed burning, and resource benefit burning (managed wildfire) related to satellite measured burn severity (the difference Normalized Burn Ratio – dNBR) following the 2013 Creek Fire and used spectral measures of post-fire stand dynamics to track changes in land surface characteristics (i.e., brightness, greenness and wetness). We found strong negative relationships between dNBR and post-fire greenness and wetness, and a positive non-linear relationship between dNBR and brightness, with greater variability at higher severities. Fire severity and post-fire surface changes also differed by treatment type. Our results showed harvested and thinned sites that were not treated with prescribed fire had the highest severity fire. When harvesting was followed by a prescribed burn, the sites experienced lower burn severity and reduced post-fire changes in vegetation greenness and wetness. Areas that had previously experienced resource benefit burns had the lowest burn severities and the highest post-fire greenness measurements compared to all other treatments, except for where the prescribed burn had occurred. These results suggest that fire treatments may be most effective at reducing the probability of hazardous fire and increasing post-fire recovery. This research demonstrates the utility of remote sensing and spatial data t o inform forest management, and how various fuel treatments can influence burn severity and post-fire vegetation response within ponderosa pine forests across the southwestern U.S.

Arizona↗
USGS2017

Historical analysis of riparian vegetation change in response to shifting management objectives on the Middle Rio Grande

Riparian ecosystems are valuable to the ecological and human communities that depend on them. Over the past century, they have been subject to shifting management practices to maximize human use and ecosystem services, creating a complex relationship between water policy, management, and the natural ecosystem. This has necessitated research on the spatial and temporal dynamics of riparian vegetation change. The San Acacia Reach of the Middle Rio Grande has experienced multiple management and river flow fluctuations, resulting in threats to its riparian and aquatic ecosystems. This research uses remote sensing data, GIS, a review of management decisions, and an assessment of climate to both quantify how riparian vegetation has been altered over time and provide interpretations of the relationships between riparian change and shifting climate and management objectives. This research focused on four management phases from 1935 to 2014, each highlighting different management practices and climate-driven river patterns, providing unique opportunities to observe a direct relationship between river management, climate, and riparian response. Overall, we believe that management practices coupled with reduced surface river-flows with limited overbank flooding influenced the compositional and spatial patterns of vegetation, including possibly increasing non-native vegetation coverage. However, recent restoration efforts have begun to reduce non-native vegetation coverage.

New Mexico↗
USGS2016

Vegetative response to water availability on the San Carlos Apache Reservation

On the San Carlos Apache Reservation in east-central Arizona, U.S.A., vegetation types such as ponderosa pine forests, pinyon-juniper woodlands, and grasslands have significant ecological, cultural, and economic value for the Tribe. This value extends beyond the tribal lands and across the Western United States. Vegetation across the Southwestern United States is susceptible to drought conditions and fluctuating water availability. Remotely sensed vegetation indices can be used to measure and monitor spatial and temporal vegetative response to fluctuating water availability conditions. We used the Moderate Resolution Imaging Spectroradiometer (MODIS)-derived Modified Soil Adjusted Vegetation Index II (MSAVI 2 ) to measure the condition of three dominant vegetation types (ponderosa pine forest, woodland, and grassland) in response to two fluctuating environmental variables: precipitation and the Standardized Precipitation Evapotranspiration Index (SPEI). The study period covered 2002 through 2014 and focused on a region within the San Carlos Apache Reservation. We determined that grassland and woodland had a similar moderate to strong, year-round, positive relationship with precipitation as well as with summer SPEI. This suggests that these vegetation types respond negatively to drought conditions and are more susceptible to initial precipitation deficits. Ponderosa pine forest had a comparatively weaker relationship with monthly precipitation and summer SPEI, indicating that it is more buffered against short-term drought conditions. This research highlights the response of multiple, dominant vegetation types to seasonal and inter-annual water availability. This research demonstrates that multi-temporal remote sensing imagery can be an effective tool for the large scale detection of vegetation response to adverse impacts from climate change and support potential management practices such as increased monitoring and management of drought-affected areas. Different vegetation types displayed various responses to water availability, further highlighting the need for individual management plans for forest and woodland, especially considering the projected drier conditions in the Southwest U.S. and other arid or semi-arid regions around the world.

Arizona↗
USGS2014

Modelling landscape-scale erosion potential related to vehicle disturbances along the U.S.-Mexico border

Decades of intensive off-road vehicle use for border security, immigration, smuggling, recreation, and military training along the USA&ndash;Mexico border have prompted concerns about long-term human impacts on sensitive desert ecosystems. To help managers identify areas susceptible to soil erosion from anthropogenic activities, we developed a series of erosion potential models based on factors from the Universal Soil Loss Equation (USLE). To better express the vulnerability of soils to human disturbances, we refined two factors whose categorical and spatial representations limit the application of the USLE for non-agricultural landscapes: the C -factor (vegetation cover) and the P -factor (support practice/management). A soil compaction index ( P -factor) was calculated as the difference in saturated hydrologic conductivity ( K s ) between disturbed and undisturbed soils, which was then scaled up to maps of vehicle disturbances digitized from aerial photography. The C -factor was improved using a satellite-based vegetation index, which was better correlated with estimated ground cover ( r 2 &thinsp;=&thinsp;0&middot;77) than data derived from land cover ( r 2 &thinsp;=&thinsp;0&middot;06). We identified 9,780&thinsp;km of unauthorized off-road tracks in the 2,800-km 2 study area. Maps of these disturbances, when integrated with soil compaction data using the USLE, provided landscape-scale information on areas vulnerable to erosion from both natural processes and human activities and are detailed enough for adaptive management and restoration planning. The models revealed erosion potential hotspots adjacent to the border and within areas managed as critical habitat for the threatened flat-tailed horned lizard and endangered Sonoran pronghorn.

Land Degradation and Development↗
USGS2013

Conflation and aggregation of spatial data improve predictive models for species with limited habitats: a case of the threatened yellow-billed cuckoo in Arizona, USA

Riparian vegetation provides important wildlife habitat in the Southwestern United States, but limited distributions and spatial complexity often leads to inaccurate representation in maps used to guide conservation. We test the use of data conflation and aggregation on multiple vegetation/land-cover maps to improve the accuracy of habitat models for the threatened western yellow-billed cuckoo (Coccyzus americanus occidentalis). We used species observations (n = 479) from a state-wide survey to develop habitat models from 1) three vegetation/land-cover maps produced at different geographic scales ranging from state to national, and 2) new aggregate maps defined by the spatial agreement of cover types, which were defined as high (agreement = all data sets), moderate (agreement ≥ 2), and low (no agreement required). Model accuracies, predicted habitat locations, and total area of predicted habitat varied considerably, illustrating the effects of input data quality on habitat predictions and resulting potential impacts on conservation planning. Habitat models based on aggregated and conflated data were more accurate and had higher model sensitivity than original vegetation/land-cover, but this accuracy came at the cost of reduced geographic extent of predicted habitat. Using the highest performing models, we assessed cuckoo habitat preference and distribution in Arizona and found that major watersheds containing high-probably habitat are fragmented by a wide swath of low-probability habitat. Focus on riparian restoration in these areas could provide more breeding habitat for the threatened cuckoo, offset potential future habitat losses in adjacent watershed, and increase regional connectivity for other threatened vertebrates that also use riparian corridors.

Arizona↗