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Ralph T. Cheng

Publications and source records attributed to Ralph T. Cheng.

At least 19 recordsLinked to original sources

Accuracy of an estuarine hydrodynamic model using smooth elements

A finite element model which uses triangular, isoparametric elements with quadratic basis functions for the two velocity components and linear basis functions for water surface elevation is used in the computation of shallow water wave motions. Specifically addressed are two common uncertainties in this class of two-dimensional hydrodynamic models: the treatment of the boundary conditions at open boundaries and the treatment of lateral boundary conditions. The accuracy of the models is tested with a set of numerical experiments in rectangular and curvilinear channels with constant and variable depth. The results indicate that errors in velocity at the open boundary can be significant when boundary conditions for water surface elevation are specified. Methods are suggested for minimizing these errors. The results also show that continuity is better maintained within the spatial domain of interest when ‘smooth’ curve-sided elements are used at shoreline boundaries than when piecewise linear boundaries are used. Finally, a method for network development is described which is based upon a continuity criterion to gauge accuracy. A finite element network for San Francisco Bay, California, is used as an example.

California

On Lagrangian residual currents with applications in south San Francisco Bay, California

The Lagrangian residual circulation has often been introduced as the sum of the Eulerian residual circulation and the Stokes' drift. Unfortunately, this definition of the Lagrangian residual circulation is conceptually incorrect because both the Eulerian residual circulation and the Stokes' drift are Eulerian variables. In this paper a classification of various residual variables are reviewed and properly defined. The Lagrangian residual circulation is then studied by means of a two-stage formulation of a computer model. The tidal circulation is first computed in a conventional Eulerian way, and then the Lagrangian residual circulation is determined by a method patterned after the method of markers and cells. To demonstrate properties of the Lagrangian residual circulation, application of this approach in South San Francisco Bay, California, is considered. With the aid of the model results, properties of the Eulerian and Lagrangian residual circulation are examined. It can be concluded that estimation of the Lagrangian residual circulation from Eulerian data may lead to unacceptable error, particularly in a tidal estuary where the tidal excursion is of the same order of magnitude as the length scale of the basin. A direction calculation of the Lagrangian residual circulation must be made and has been shown to be feasible.

California

On tide-induced Lagrangian residual current and residual transport: 1. Lagrangian residual current

Residual currents in tidal estuaries and coastal embayments have been recognized as fundamental factors which affect the long-term transport processes. It has been pointed out by previous studies that it is more relevant to use a Lagrangian mean velocity than an Eulerian mean velocity to determine the movements of water masses. Under weakly nonlinear approximation, the parameter k , which is the ratio of the net displacement of a labeled water mass in one tidal cycle to the tidal excursion, is assumed to be small. Solutions for tides, tidal current, and residual current have been considered for two-dimensional, barotropic estuaries and coastal seas. Particular attention has been paid to the distinction between the Lagrangian and Eulerian residual currents. When k is small, the first-order Lagrangian residual is shown to be the sum of the Eulerian residual current and the Stokes drift. The Lagrangian residual drift velocity or the second-order Lagrangian residual current has been shown to be dependent on the phase of tidal current. The Lagrangian drift velocity is induced by nonlinear interactions between tides, tidal currents, and the first-order residual currents, and it takes the form of an ellipse on a hodograph plane. Several examples are given to further demonstrate the unique properties of the Lagrangian residual current.

Water Resources Research

On tide-induced Lagrangian residual current and residual transport: 2. Residual transport with application in south San Francisco Bay, California

The transports of solutes and other tracers are fundamental to estuarine processes. The apparent transport mechanisms are convection by tidal current and current-induced shear effect dispersion for processes which take place in a time period of the order of a tidal cycle. However, as emphasis is shifted toward the effects of intertidal processes, the net transport is mainly determined by tide-induced residual circulation and by residual circulation due to other processes. The commonly used intertidal conservation equation takes the form of a convection-dispersion equation in which the convective velocity is the Eulerian residual current, and the dispersion terms are often referred to as the phase effect dispersion or, sometimes, as the “tidal dispersion.” The presence of these dispersion terms is merely the result of a Fickian type hypothesis. Since the actual processes are not Fickian, thus a Fickian hypothesis obscures the physical significance of this equation. Recent research results on residual circulation have suggested that long-term transport phenomena are closely related to the Lagrangian residual current or the Lagrangian residual transport. In this paper a new formulation of an intertidal conservation equation is presented and examined in detail. In a weakly nonlinear tidal estuary the resultant intertidal transport equation also takes the form of a convection-dispersion equation without the ad hoc introduction of phase effect dispersion in a form of dispersion tensor. The convective velocity in the resultant equation is the first-order Lagrangian residual current (the sum of the Eulerian residual current and the Stokes drift). The remaining dispersion terms are important only in higher-order solutions; they are due to shear effect dispersion and turbulent mixing. There exists a dispersion boundary layer adjacent to shoreline boundaries. An order of magnitude estimate of the properties in the dispersion boundary layer is given. The present treatment of intertidal transport processes is illustrated by an analytical solution for an amphidromic system and by a numerical application in South San Francisco Bay, California. The present formulation reveals that the mechanism for long-term transport of solutes is mainly convection due to the Lagrangian residual current in the interior of a tidal estuary. This result also points out the weakness in the tidal dispersion formulation, and explains the large variability of the observed values for tidal dispersion coefficients. Further research on properties of the dispersion boundary layer is needed.

California

Predicting the vertical structure of tidal current and salinity in San Francisco Bay, California

A two-dimensional laterally averaged numerical estuarine model is developed to study the vertical variations of tidal hydrodynamic properties in the central/north part of San Francisco Bay, California. Tidal stage data, current meter measurements, and conductivity, temperature, and depth profiling data in San Francisco Bay are used for comparison with model predictions. An extensive review of the literature is conducted to assess the success and failure of previous similar investigations and to establish a strategy for development of the present model. A σ plane transformation is used in the vertical dimension to alleviate problems associated with fixed grid model applications in the bay, where the tidal range can be as much as 20–25% of the total water depth. Model predictions of tidal stage and velocity compare favorably with the available field data, and prototype salinity stratification is qualitatively reproduced. Conclusions from this study as well as future model applications and research needs are discussed.

California

Dual-RiverSonde measurements of two-dimensional river flow patterns

Two-dimensional river flow patterns have been measured using a pair of RiverSondes in two experiments in the Sacramento-San Joaquin River Delta system of central California during April and October 2007. An experiment was conducted at Walnut Grove, California in order to explore the use of dual RiverSondes to measure flow patterns at a location which is important in the study of juvenile fish migration. The data available during the first experiment were limited by low wind, so a second experiment was conducted at Threemile Slough where wind conditions and surface turbulence historically have resulted in abundant data. Both experiments included ADCP near-surface velocity measurements from either manned or unmanned boats. Both experiments showed good comparisons between the RiverSonde and ADCP measurements. The flow conditions at both locations are dominated by tidal effects, with partial flow reversal at Walnut Grove and complete flow reversal at Threemile Slough. Both systems showed complex flow patterns during the flow reversals. Quantitative comparisons between the RiverSondes and an ADCP on a manned boat at Walnut Grove showed mean differences of 4.5 cm/s in the u (eastward) and 7.6 cm/s in the v (northward) components, and RMS differences of 14.7 cm/s in the u component and 21.0 cm/s in the v component. Quantitative comparisons between the RiverSondes and ADCPs on autonomous survey vessels at Threemile Slough showed mean differences of 0.007 cm/s in the u component and 0.5 cm/s in the v component, and RMS differences of 7.9 cm/s in the u component and 13.5 cm/s in the v component after obvious outliers were removed. ?? 2008 IEEE.

Conference Paper

Modeling hydrodynamics and heat transport in Upper Klamath Lake, Oregon, and implications for water quality

The three-dimensional numerical model UnTRIM was used to model hydrodynamics and heat transport in Upper Klamath Lake, Oregon, between mid-June and mid-September in 2005 and between mid-May and mid-October in 2006. Data from as many as six meteorological stations were used to generate a spatially interpolated wind field to use as a forcing function. Solar radiation, air temperature, and relative humidity data all were available at one or more sites. In general, because the available data for all inflows and outflows did not adequately close the water budget as calculated from lake elevation and stage-capacity information, a residual inflow or outflow was used to assure closure of the water budget. Data used for calibration in 2005 included lake elevation at 3 water-level gages around the lake, water currents at 5 Acoustic Doppler Current Profiler (ADCP) sites, and temperature at 16 water-quality monitoring locations. The calibrated model accurately simulated the fluctuations of the surface of the lake caused by daily wind patterns. The use of a spatially variable surface wind interpolated from two sites on the lake and four sites on the shoreline generally resulted in more accurate simulation of the currents than the use of a spatially invariant surface wind as observed at only one site on the lake. The simulation of currents was most accurate at the deepest site (ADCP1, where the velocities were highest) using a spatially variable surface wind; the mean error (ME) and root mean square error (RMSE) for the depth-averaged speed over a 37-day simulation from July 26 to August 31, 2005, were 0.50 centimeter per second (cm/s) and 3.08 cm/s, respectively. Simulated currents at the remaining sites were less accurate and, in general, underestimated the measured currents. The maximum errors in simulated currents were at a site near the southern end of the trench at the mouth of Howard Bay (ADCP7), where the ME and RMSE in the depth-averaged speed were 3.02 and 4.38 cm/s, respectively. The range in ME of the temperature simulations over the same period was –0.94 to 0.73 degrees Celsius (°C), and the RMSE ranged from 0.43 to 1.12°C. The model adequately simulated periods of stratification in the deep trench when complete mixing did not occur for several days at a time. The model was validated using boundary conditions and forcing functions from 2006 without changing any calibration parameters. A spatially variable wind was used. Data for the model validation periods in 2006 included lake elevation at 4 gages around the lake, currents collected at 2 ADCP sites, and temperature collected at 21 water-quality monitoring locations. Errors generally were larger than in 2005. ME and RMSE in the simulated velocity at ADCP1 were 2.30 cm/s and 3.88 cm/s, respectively, for the same 37-day simulation over which errors were computed for 2005. The ME in temperature over the same period ranged from –0.56 to 1.5°C and the RMSE ranged from 0.41 to 1.86°C. Numerical experiments with conservative tracers were used to demonstrate the prevailing clockwise circulation patterns in the lake, and to show the influence of water from the deep trench located along the western shoreline of the lake on fish habitat in the northern part of the lake. Because water exiting the trench is split into two pathways, the numerical experiments indicate that bottom water from the trench has a stronger influence on water quality in the northern part of the lake, and surface water from the trench has a stronger influence on the southern part of the lake. This may be part of the explanation for why episodes of low dissolved oxygen tend to be more severe in the northern than in the southern part of the lake.

Oregon

Water velocity and suspended solids measurements by in-situ instruments in Upper Klamath Lake, Oregon

The U. S. Geological Survey conducted hydrodynamic measurements in Upper Klamath Lake during four summer seasons (approximately mid-June to mid-September) during 2003 to 2006. Measurements included water current profiles made by acoustic Doppler current profilers at a number of fixed locations in the lake during all four years as well as from a moving boat during 2005 and 2006. Measurements of size distribution of suspended material were made at four locations in the lake during 2004-2006. Raw (unfiltered) data are presented as time series of measurements. In addition, water-velocity data have been filtered to remove wind-induced variations with periods less than thirty hours from the measurements. Bar graphs of horizontal and vertical water speed and acoustic backscatter have been generated to discern diurnal variations, especially as they relate to wind patterns over the lake. Mean speeds of the horizontal currents in the lake range between about 3.5 to 15 cm/s with the higher speeds at the deep locations in the trench on the west side of the lake. Current directions generally conform to the lake’s bathymetry contours and the water circulation pattern is usually in a clockwise direction around the lake as established by the prevailing north to northwesterly surface winds in the region. Diurnal patterns in horizontal currents probably relate to diurnal wind patterns with minimum wind speeds near noon and maximum wind speeds near 2100. Diurnal variations in vertical velocities do not appear to be related to wind patterns; they do appear to be related to expected patterns of vertical migration of Aphanizomenon flos aquae , (AFA) the predominant species of blue-green algae in the lake. Similarly, diurnal variations in acoustic backscatter, especially near the lake’s surface, are probably related to the vertical migration of AFA.

Oregon

Semi-implicit finite difference methods for three-dimensional shallow water flow

A semi-implicit finite difference method for the numerical solution of three-dimensional shallow water flows is presented and discussed. The governing equations are the primitive three-dimensional turbulent mean flow equations where the pressure distribution in the vertical has been assumed to be hydrostatic. In the method of solution a minimal degree of implicitness has been adopted in such a fashion that the resulting algorithm is stable and gives a maximal computational efficiency at a minimal computational cost. At each time step the numerical method requires the solution of one large linear system which can be formally decomposed into a set of small three-diagonal systems coupled with one five-diagonal system. All these linear systems are symmetric and positive definite. Thus the existence and uniquencess of the numerical solution are assured. When only one vertical layer is specified, this method reduces as a special case to a semi-implicit scheme for solving the corresponding two-dimensional shallow water equations. The resulting two- and three-dimensional algorithm has been shown to be fast, accurate and mass-conservative and can also be applied to simulate flooding and drying of tidal mud-flats in conjunction with three-dimensional flows. Furthermore, the resulting algorithm is fully vectorizable for an efficient implementation on modern vector computers.

International Journal for Numerical Methods in Flu

Evaluating a Radar-Based, Non Contact Streamflow Measurement System in the San Joaquin River at Vernalis, California

Accurate measurement of flow in the San Joaquin River at Vernalis, California, is vital to a wide range of Federal and State agencies, environmental interests, and water contractors. The U.S. Geological Survey uses a conventional stage-discharge rating technique to determine flows at Vernalis. Since the flood of January 1997, the channel has scoured and filled as much as 20 feet in some sections near the measurement site resulting in an unstable stage-discharge rating. In response to recent advances in measurement techniques and the need for more accurate measurement methods, the Geological Survey has undertaken a technology demonstration project to develop and deploy a radar-based streamflow measuring system on the bank of the San Joaquin River at Vernalis, California. The proposed flow-measurement system consists of a ground-penetrating radar system for mapping channel geometries, a microwave radar system for measuring surface velocities, and other necessary infrastructure. Cross-section information derived from ground penetrating radar provided depths similar to those measured by other instruments during the study. Likewise, surface-velocity patterns and magnitudes measured by the pulsed Doppler radar system are consistent with near surface current measurements derived from acoustic velocity instruments. Since the ratio of surface velocity to mean velocity falls to within a small range of theoretical value, using surface velocity as an index velocity to compute river discharge is feasable. Ultimately, the non-contact radar system may be used to make continuous, near-real-time flow measurements during high and medium flows. This report documents the data collected between April 14, 2002 and May 17, 2002 for the purposes of testing this radar based system. Further analyses of the data collected during this field effort will lead to further development and improvement of the system.

Open-File Report

High frequency radar measurements of tidal currents flowing through San Pablo Strait, San Francisco Bay

High frequency (HF) radar measurements of the surface current averaged over the upper 0.5 m in San Pablo Strait were compared with current meter measurements of the subsurface current made at 9.4 m below mean lower low water (MLLW) over two 12.4-h tidal cycles. After averaging the radar and current meter data over two tidal cycles, a southerly (ebbing direction) surface current of 32 cm·s −1 was deduced from the radar measurements and a northerly (flooding direction) subsurface current of 7 cm·s −1 from the current meter measurements. This nontidal flow is maintained by freshwater discharge from the Sacramento–San Joaquin Rivers into Suisun and San Pablo Bays. The radar measurement technique provides quantitative estimates of the surface currents that previously were determined only from surface drifter studies.

Limnology and Oceanography

Laboratory and field evaluations of the LISST-100 instrument for suspended particle size determinations

Advances in technology have resulted in a new instrument that is designed for in-situ determination of particle size spectra. Such an instrument that can measure undisturbed particle size distributions is much needed for sediment transport studies. The LISST-100 (Laser In-Situ Scattering and Transmissometry) uses the principle of laser diffraction to obtain the size distribution and volume concentration of suspended material in 32 size classes logarithmically spaced between 1.25 and 250 μm. This paper describes a laboratory evaluation of the ability of LISST-100 to determine particle sizes using suspensions of single size, artificial particles. Findings show the instrument is able to determine particle size to within about 10% with increasing error as particle size increases. The instrument determines volume (or mass) concentration using a volume conversion factor C v . This volume conversion factor is theoretically a constant. In the laboratory evaluation C v is found to vary by a factor of about three over the particle size range between 5 and 200 μm. Results from field studies in South San Francisco Bay show that values of mass concentration of suspended marine sediments estimated by LISST-100 agree favorably with estimates from optical backscatterance sensors if an appropriate value of C v , according to mean size, is used and the assumed average particle (aggregate) density is carefully chosen. Analyses of size distribution of suspended materials in South San Francisco Bay over multiple tide cycles suggest the likelihood of different sources of sediment because of different size characteristics during flood and ebb cycles.

Marine Geology

An overview of San Francisco Bay PORTS

The Physical Oceanographic Real-Time System (PORTS) provides observations of tides, tidal currents, and meteorological conditions in real-time. The San Francisco Bay PORTS (SFPORTS) is a decision support system to facilitate safe and efficient maritime commerce. In addition to real-time observations, SFPORTS includes a nowcast numerical model forming a San Francisco Bay marine nowcast system. SFPORTS data and nowcast numerical model results are made available to users through the World Wide Web (WWW). A brief overview of SFPORTS is presented, from the data flow originated at instrument sensors to final results delivered to end users on the WWW. A user-friendly interface for SFPORTS has been designed and implemented. Appropriate field data analysis, nowcast procedures, design and generation of graphics for WWW display of field data and nowcast results are presented and discussed. Furthermore, SFPORTS is designed to support hazardous materials spill prevention and response, and to serve as resources to scientists studying the health of San Francisco Bay ecosystem. The success (or failure) of the SFPORTS to serve the intended user community is determined by the effectiveness of the user interface.

California

A nowcast model for tides and tidal currents in San Francisco Bay, California

National Oceanographic and Atmospheric Administration (NOAA) installed Physical Oceanographic Real-Time System (PORTS) in San Francisco Bay, California to provide observations of tides, tidal currents, and meteorological conditions. PORTS data are used for optimizing vessel operations, increasing margin of safety for navigation, and guiding hazardous material spill prevention and response. Because tides and tidal currents in San Francisco Bay are extremely complex, limited real-time observations are insufficient to provide spatial resolution for variations of tides and tidal currents. To fill the information gaps, a highresolution, robust, semi-implicit, finite-difference nowcast numerical model has been implemented for San Francisco Bay. The model grid and water depths are defined on coordinates based on Mercator projection so the model outputs can be directly superimposed on navigation charts. A data assimilation algorithm has been established to derive the boundary conditions for model simulations. The nowcast model is executed every hour continuously for tides and tidal currents starting from 24 hours before the present time (now) covering a total of 48 hours simulation. Forty-eight hours of nowcast model results are available to the public at all times through the World Wide Web (WWW). Users can view and download the nowcast model results for tides and tidal current distributions in San Francisco Bay for their specific applications and for further analysis.

California

Nowcast model for hazardous material spill prevention and response, San Francisco Bay, California

The National Oceanic and Atmospheric Administration (NOAA) installed the Physical Oceanographic Real-time System (PORTS) in San Francisco Bay, California, to provide real-time observations of tides, tidal currents, and meteorological conditions to, among other purposes, guide hazardous material spill prevention and response. Integrated with nowcast modeling techniques and dissemination of real-time data and the nowcasting results through the Internet on the World Wide Web, emerging technologies used in PORTS for real-time data collection forms a nowcast modeling system. Users can download tides and tidal current distribution in San Francisco Bay for their specific applications and/or for further analysis.

Conference Paper

Bottom boundary layer in south San Francisco Bay, California

Detailed velocity distributions within the benthic turbulent boundary layer were measured by a Broad Band Acoustic Doppler Current Profiler (BB-ADCP) in South San Francisco Bay, California. In "mode 5", the BB-ADCP was able to measure velocity in 5 cm increments. The validation of these measurements was achieved by comparing the BB-ADCP measurements with the velocities measured by a Narrow Band Acoustic Doppler Current Profiler (NB-ADCP) in close proximity. There were thirty-three (33) velocity time-series measured by the BB-ADCP beginning at 7 cm above bed and extending to 175 cm in water column for about two weeks. The velocities from locations at 7 cm and 12 cm above the bed were determined to be of lower accuracy, and they were not used in estimates of friction velocity, u.. The values of u. at 95% confidence level were determined with relative error less than 20%. The time-series of u. varied with velocity outside of the boundary layer, and responded to spring-neap tidal variations. Attempts to use acoustic backscatterance echo intensity to measure suspended sediment concentration showed prom ise, and merit consideration in future studies.

California

Near bottom velocity measurements in San Francisco Bay, California

The ability to accurately measure long-term time-series of tidal currents in bays and estuaries is critical in estuarine hydrodynamic studies. Accurate measurements of tidal currents near the air-water interface and in the bottom boundary layer remain difficult in spite of the significant advances in technology for measuring tidal currents which have been achieved in recent years. One of the objectives of this study is to demonstrate that turbulent mean velocity distribution within the bottom boundary layer can be determined accurately by using a broad-band acoustic Doppler current profiler (BB-ADCP). A suite of instruments, including two BB-ADCPs and four electromagnetic (EM) current meters was deployed in San Francisco Bay, California in an investigation of resuspension and transport of sediment during March 1995. The velocity measurements obtained in the bottom boundary layer by BB-ADCP were highly coherent (r2>0.94) with the velocity measurements obtained by EM current meters. During early March 1995, both BB-ADCPs and EM current meters recorded a very unusual flow event. Agreement among independent measurements by these instruments in describing such an atypical hydrodynamic occurrence further validates the velocity measurements obtained by BB-ADCP in the bottom boundary layer.

Conference Paper

Modeling the periodic stratification and gravitational circulation in San Francisco Bay, California

A high resolution, three-dimensional (3-D) hydrodynamic numerical model is applied to San Francisco Bay, California to simulate the periodic tidal stratification caused by tidal straining and stirring and their long-term effects on gravitational circulation. The numerical model is formulated using fixed levels in the vertical and uniform computational mesh on horizontal planes. The governing conservation equations, the 3-D shallow water equations, are solved by a semi-implicit finite-difference scheme. Numerical simulations for estuarine flows in San Francisco Bay have been performed to reproduce the hydrodynamic properties of tides, tidal and residual currents, and salt transport. All simulations were carried out to cover at least 30 days, so that the spring-neap variance in the model results could be analyzed. High grid resolution used in the model permits the use of a simple turbulence closure scheme which has been shown to be sufficient to reproduce the tidal cyclic stratification and well-mixed conditions in the water column. Low-pass filtered 3-D time-series reveals the classic estuarine gravitational circulation with a surface layer flowing down-estuary and an up-estuary flow near the bottom. The intensity of the gravitational circulation depends upon the amount of freshwater inflow, the degree of stratification, and spring-neap tidal variations.

Conference Paper