Geology ReportsSearch

Geology topics

Lin Ye

Publications and source records attributed to Lin Ye.

2 recordsLinked to original sources

Learning from arid and urban aquatic ecosystems to inform more sustainable and resilient futures

The hydrology and aquatic ecology of arid environments has long been understudied relative to temperate regions. Yet spatially and temporally intermittent and ephemeral waters characterized by flashy hydrographs typify arid regions that comprise a substantial proportion of the Earth. Additionally, drought, intense storms, and human modification of landscapes increasingly affect many temperate regions, resulting in hydrologic regimes more similar to aridlands. Here we review the contributions of Dr. Nancy Grimm to aridland hydrology and ecology, and applications of these insights to urban ecosystems and resilience of social-ecological-technological systems. Grimm catalyzed study of nitrogen cycling in streams and characterized feedbacks between surface water-groundwater exchange, nitrogen transformations, and aquatic biota. In aridlands, outcomes of these interactions depend on short- and long-term variation in the hydrologic regime. Grimm and colleagues applied hydrological and biogeochemical insights gained from study of aridland streams to urban ecosystems, integrating engineering, social and behavioral sciences, and geography. These studies evolved from characterizing the spatial heterogeneity of urban systems (i.e., watersheds, novel aquatic systems) and its influence on nutrient dynamics to an approach that evaluated human decision-making as a driver of disturbance regimes and changes in ecosystem function. Finally, Grimm and colleagues have applied principles of urban ecology to look toward the future of cities, considering scenarios of sustainable and resilient futures. We identify cross-cutting themes and approaches that have motivated discoveries across Grimm’s multi-decadal career, including spatial and temporal heterogeneity, hydrologic connectivity and regime, disturbance, systems thinking, and resilience. Finally, we emphasize Grimm’s broad contributions to science via support of long-term research, dedication to mentoring, and extensive collaborations that facilitated transdisciplinary research.

Journal of Hydrology

Fish gut microbiota analysis differentiates physiology and behavior of invasive Asian carp and indigenous American fish

Gut microbiota of invasive Asian silver carp (SVCP) and indigenous planktivorous gizzard shad (GZSD) in Mississippi river basin were compared using 16S rRNA gene pyrosequencing. Analysis of more than 440 000 quality-filtered sequences obtained from the foregut and hindgut of GZSD and SVCP revealed high microbial diversity in these samples. GZSD hindgut (GZSD_H) samples (n=23) with >7000 operational taxonomy units (OTUs) exhibited the highest alpha-diversity indices followed by SVCP foregut (n=15), GZSD foregut (n=9) and SVCP hindgut (SVCP_H) (n=24). UniFrac distance-based non-metric multidimensional scaling (NMDS) analysis showed that the microbiota of GZSD_H and SVCP_H were clearly separated into two clusters: samples in the GZSD cluster were observed to vary by sampling location and samples in the SVCP cluster by sampling date. NMDS further revealed distinct microbial community between foregut to hindgut for individual GZSD and SVCP. Cyanobacteria, Proteobacteria, Actinobacteria and Bacteroidetes were detected as the predominant phyla regardless of fish or gut type. The high abundance of Cyanobacteria observed was possibly supported by their role as the fish’s major food source. Furthermore, unique and shared OTUs and OTUs in each gut type were identified, three OTUs from the order Bacteroidales, the genus Bacillariophyta and the genus Clostridium were found significantly more abundant in GZSD_H (14.9–22.8%) than in SVCP_H (0.13–4.1%) samples. These differences were presumably caused by the differences in the type of food sources including bacteria ingested, the gut morphology and digestion, and the physiological behavior between GZSD and SVCP.

International Society for Microbial Ecology