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Kimberly A. Larsen

Publications and source records attributed to Kimberly A. Larsen.

9 recordsLinked to original sources
USGS2026

Seasonal trophic dynamics drive growth potential and predation risk for reintroduced Chinook salmon in Shasta Reservoir

Reservoir ecosystems can significantly affect anadromous salmon populations reintroduced upstream of impassable high-head dams. In this study, we examine how a novel reservoir food web created by an impoundment can limit juvenile growth or survival through the seasonal production or access to food, promote competition for available resources, and affect risk of the food supply or predation mortality, all of which can be strongly influenced by the thermal regime. Shasta Reservoir, the largest impoundment in California’s Central Valley Project, presents opportunities and risks for winter-run Chinook salmon ( Oncorhynchus tshawytscha ), a federally endangered population targeted for reintroduction into the McCloud River, which flows into the reservoir. We integrated field sampling, stable isotope analysis, hydroacoustic surveys, and bioenergetics modeling to characterize Shasta Reservoir’s food web and evaluate seasonal growth potential and predation risk for juvenile salmon. Zooplankton, dominated by Daphnia , provided favorable foraging conditions in spring but declined sharply by late summer, coinciding with high consumption demand from abundant threadfin shad ( Dorosoma petenense ). Bioenergetics simulations indicated that fry that would ordinarily enter the reservoir in autumn would face poor growth opportunities. They would also be exposed to elevated predation risk driven by warm temperatures and high metabolic demand, particularly from piscivorous salmonids and Sacramento pikeminnow ( Ptychocheilus grandis ). Limited information on predator abundances precludes the ability to quantify total predation demand. Alternatively, juveniles entering the reservoir the following spring would encounter greater prey availability and reduced predation pressure. These findings highlight the strong influence of seasonal thermal structure and food web dynamics on reservoir constraints and underscore the need to incorporate the dynamics of key habitats into reintroduction management and decisions. Our framework provides a quantitative, mechanistically-based approach for evaluating the role of reservoirs in salmon reintroductions above high-head dams.

California↗
USGS2024

Differences in life history patterns of American shad, Alosa sapidissima, populations between ancestral, Atlantic coast, and non-native, Pacific coast rivers of North America

Organisms naturalized outside their native range can reveal new life history patterns in new environments. Here, we compare life history patterns of American shad, Alosa sapidissima, from five rivers along the U.S. Pacific coast (introduced range) with contemporary data from the Atlantic coast source populations. The Pacific coast fish grew slower, matured at a younger age, and were less often iteroparous than conspecifics from the Hudson River and Susquehanna River sources. Differences among the Pacific coast populations indicated that some combination of phenotypic plasticity and genetic adaptation has occurred since the transplants in the 1870s. Microchemical analysis of otoliths from returning adults demonstrated an immature, extended freshwater life history form, locally known as “mini-shad”. These fish remain in the river for at least 1 year or enter salt water briefly and then return to fresh water for several months prior to subsequent seaward migration and return as adults. This and other forms of variation (extent of estuary use and size at sea water entry) expand the understanding of Alosine migration and life history diversity.

Canadian Journal of Fisheries and Aquatic Sciences↗
USGS2023

Growth performance of Rainbow Trout in reservoir tributaries and implications for steelhead growth potential above Skagit River dams

Objective In the Pacific Northwest (USA), Pacific salmon Oncorhynchus spp. populations have been declining significantly for decades, prompting stakeholders to respond with a variety of conservation and restoration measures. One such measure being considered in the Skagit River basin (Washington, USA) is the introduction of steelhead Oncorhynchus mykiss (anadromous Rainbow Trout) above the impassable Gorge, Diablo, and Ross dams to bolster their populations. Because freshwater growth is key to survival at subsequent life stages, we evaluated current trends in size and growth of Rainbow Trout among key tributaries to Gorge, Diablo, and Ross reservoirs using empirical data collection and bioenergetics modeling. Methods For nine candidate streams, a bioenergetics model was used to assess how temperature and prey consumption affected growth performance of Rainbow Trout between annuli 1 and 2, and 2 and 3. Thermal scenarios were created to evaluate how fish growth responded to temperature variability while total annual consumption was constrained within empirical growth estimates. We then compared these results to back-calculated size thresholds established by size-at-age observed in wild steelhead adults that returned to the Skagit River below the dams. Result Of the streams proposed for introductions, there was one instance (McMillan Creek) in the nominal simulations where growth met or exceeded the size at annulus 2 or 3 of a returning adult steelhead (24.9 g at annulus 2 and 50.3 g at annulus 3). Modeled growth under different thermal scenarios showed that colder temperatures (0.1–10.7°C, Canyon Creek) produced higher growth than under the nominal or warm scenarios (2.0–15.3°C, Canyon Creek), as well as one additional tributary where size at annulus 2 or 3 (±2 SE) was comparable to the threshold established by adult steelhead below the dams (Big Beaver Creek, annulus 3). Conclusion These results suggest Rainbow Trout growth is most limited by prey availability in the examined upper Skagit tributaries.

Washington↗
USGS2021

Investigation of otolith microstructure and composition for identification of rearing strategies and associated Baker Lake sockeye salmon (Oncorhynchus nerka) smolt production, Washington, 2016–17

Baker River (Washington, USA) sockeye salmon (Oncorhynchus nerka) are a recovering Puget Sound stock that are aided by trap-and-haul and hatchery programs to mitigate for the presence of a high head dam. The relative contribution of hatchery and natural adults to overall production of smolts and recruits is unknown. The ability to identify three different sockeye production groups (natural production, artificial incubation, and artificial spawning beach) within the Baker system is crucial to moving forward with management goals. The examination of otoliths was proposed as a technical tool for improved understanding and management of Baker sockeye rebuilding efforts. Otoliths were chosen as they provide a chronological record on an individual fish basis and have been shown to identify fish origin through both otolith microstructure and chemistry. The goal of this pilot project was to determine the feasibility of assigning sockeye to their production source based on otolith analysis. A variety of methods were employed and compared for accuracy of group assignment. The maximum overall accuracy capable of attainment was 88.57 percent, however complete confidence (100 percent) in the separation of natural production from artificial production was reached through the analysis of trace elements alone. Some segregation of the two artificial production groups was reached through analysis of a few specific trace elements (magnesium, manganese, and zinc). This confidence in assignment for the artificial production groups was aided by a two-step process of combining trace elements with microstructure. The Sr isotope ratios supported the trace element findings but did not help to boost the overall level of confidence in the separation of production groups. Based upon the results from this preliminary investigation, one could choose a statistically sound, efficient, and cost-effective use of otoliths as a tool for discriminating between the sockeye production groups of the Baker Lake system.

Washington↗
USGS2018

Juvenile coho salmon growth and health in streams across an urbanization gradient

Expanding human population and urbanization alters freshwater systems through structural changes to habitat, temperature effects from increased runoff and reduced canopy cover, altered flows, and increased toxicants. Current stream assessments stop short of measuring health or condition of species utilizing these freshwater habitats and fail to link specific stressors mechanistically to the health of organisms in the stream. Juvenile fish growth integrates both external and internal conditions providing a useful indicator of habitat quality and ecosystem health. Thus, there is a need to account for ecological and environmental influences on fish growth accurately. Bioenergetics models can simulate changes in growth and consumption in response to environmental conditions and food availability to account for interactions between an organism's environmental experience and utilization of available resources. The bioenergetics approach accounts for how thermal regime, food supply, and food quality affect fish growth. This study used a bioenergetics modeling approach to evaluate the environmental factors influencing juvenile coho salmon growth among ten Pacific Northwest streams spanning an urban gradient. Urban streams tended to be warmer, have earlier emergence dates and stronger early season growth. However, fish in urban streams experienced increased stress through lower growth efficiencies, especially later in the summer as temperatures warmed, with as much as a 16.6% reduction when compared to fish from other streams. Bioenergetics modeling successfully characterized salmonid growth in small perennial streams as part of a more extensive monitoring program and provides a powerful assessment tool for characterizing mixed life-stage specific responses in urban streams.

Science of the Total Environment↗
USGS2017

Gauging resource exploitation by juvenile Chinook salmon (Oncorhynchus tshawytscha) in restoring estuarine habitat

In the context of delta restoration and its impact on salmonid rearing, success is best evaluated based on whether out-migrating juvenile salmon can access and benefit from suitable estuarine habitat. Here, we integrated 3 years of post-restoration monitoring data including habitat availability, invertebrate prey biomass, and juvenile Chinook salmon ( Oncorhynchus tshawytscha ) physiological condition to determine whether individuals profited from the addition of 364 ha of delta habitat in South Puget Sound, Washington, United States. Productivity in the restored mudflat was comparable to reference sites 3 years after dike removal, surpassing a mean total of 6 million kJ energy from invertebrate prey. This resulted from the development of a complex network of tidal channels and a resurgence in dipteran biomass that was unique to the restoration area. Consequently, a notable shift in invertebrate consumption occurred between 2010 and 2011, whereby individuals switched from eating primarily amphipods to dipteran flies; however, dietary similarity to the surrounding habitat did not change from year to year, suggesting that this shift was a result of a change in the surrounding prey communities. Growth rates did not differ between restored and reference sites, but catch weight was positively correlated with prey biomass, where greater prey productivity appeared to offset potential density-dependent effects. These results demonstrate how the realized function of restoring estuarine habitat is functionally dependent. High prey productivity in areas with greater connectivity may support healthy juvenile salmon that are more likely to reach the critical size class for offshore survival.

Washington↗
USGS2011

Verification of a ‘freshwater-type’ life history variant of juvenile American shad in the Columbia River

American shad are native to the Atlantic coast of North America and were successfully introduced to the Pacific coast in the 1870s. They are now more abundant in the Columbia River than are its native salmon. As in their native range, Columbia River American shad are anadromous and have been assumed to solely exhibit an ‘ocean-type’ life history, characterized by a short period of juvenile rearing in freshwater, followed by seaward migration and saltwater entry before age-1, with sexually mature individuals returning to freshwater to spawn beginning at age-3. During October 2007, emigrating juvenile American shad were captured in the juvenile fish monitoring facility at Bonneville Dam (river kilometer 235) on the Columbia River. Their length frequencies revealed the presence of two modes; the lower mode averaged 77 mm fork length (FL) and the upper mode averaged 184 mm FL. A subsample of fish from each mode was aged using otoliths. Otoliths from the lower mode (n=10) had no annuli, indicating that they were all age-0, while otoliths from the upper mode (n=25) had one or two annuli, indicating that they were either age-1 or age-2, respectively. Spawning adults collected in June 2007 averaged 393 mm FL (range 305-460 mm; n=21) and were estimated to range in age from 3-6. Elemental analyses of juvenile and adult otoliths provide evidence for deviations from the typical migration pattern expected for this species, including extensive freshwater rearing of up to two years. This evidence shows that a ‘freshwater-type’ of juvenile American shad exists as year-round or transient residents in the Columbia River basin. The ecological role of this life history variant within the fish community is unknown.

Idaho, Oregon, Washington↗
USGS2011

Thiaminase activity and life history investigations in American Shad in the Columbia River

American shad Alosa sapidissima fry were successfully transplanted from the Atlantic to the Pacific coast in 1871 and have subsequently proliferated. The Columbia River population is in the millions, yet few investigations have been conducted to better understand their life history, population dynamics, or potential impacts on other species. In 2007 and 2008 we captured American shad from the Columbia River to assess levels of thiaminase activity and to characterize some aspects of American shad life history. Thiaminase levels in age-0 and adult fish were high and ranged from 4,113-20,874 pmol/g/min. Ages of spawning American shad ranged from 3-7 years and iteroparity was approximately 33-36% in the spawning population. Males were typically younger and smaller and had a higher degree of iteroparity than females.

Report↗
USGS2011

Thiaminase activity and life history investigations in American shad in the Columbia River

American shad Alosa sapidissima fry were successfully transplanted from the Atlantic to the Pacific coast in 1871 and have subsequently proliferated. The Columbia River population is in the millions, yet few investigations have been conducted to better understand their life history, population dynamics, or potential impacts on other species. In 2007 and 2008 we captured American shad from the Columbia River to assess levels of thiaminase activity and to characterize some aspects of American shad life history. Thiaminase levels in age-0 and adult fish were high and ranged from 4,113-20,874 pmol/g/min. Ages of spawning American shad ranged from 3-7 years and iteroparity was approximately 33-36% in the spawning population. Males were typically younger and smaller and had a higher degree of iteroparity than females.

Oregon, Washington↗