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Ken D. Bovee

Publications and source records attributed to Ken D. Bovee.

At least 19 recordsLinked to original sources

Environmental flow studies of the Fort Collins Science Center— Cherry Creek, Arizona

At the request of the U.S. Forest Service, an instream flow assessment was conducted at Cherry Creek, Ariz., to investigate habitat for native and introduced fish species and to describe the beneficial use of a possible instream flow water right. The U.S. Geological Survey (USGS) Fort Collins Science Center performed an intensive field study of two sections of Cherry Creek in September 2008 to provide base data for hydrodynamic simulation of the flow conditions in the stream. The USGS Arizona Cooperative Fish and Wildlife Research Unit, at the University of Arizona School of Natural Resources, conducted a survey of the habitat requirements of the resident fish species in Cherry Creek and provided the habitat suitability criteria used in this study. The habitat suitability criteria were combined with hydrodynamic simulation results to quantify fish habitat for the full range of daily flow experienced in the creek and to produce maps of habitat occurrence for those flows. The flow record at the Cherry Creek stream gage was used to generate habitat response values over time. The long-term habitat response was incorporated into an Excel (Registered) spreadsheet to allow evaluation of habitat occurrence with and without an instream water right under different hypothetical water withdrawal scenarios. The spreadsheet displays information about the time sequence of habitat events, the duration of critical events, and habitat retention.

Arizona↗

Development and Application of a Decision Support System for Water Management Investigations in the Upper Yakima River, Washington

The Yakima River Decision Support System (YRDSS) was designed to quantify and display the consequences of different water management scenarios for a variety of state variables in the upper Yakima River Basin, located in central Washington. The impetus for the YRDSS was the Yakima River Basin Water Storage Feasibility Study, which investigated alternatives for providing additional water in the basin for threatened and endangered fish, irrigated agriculture, and municipal water supply. The additional water supplies would be provided by combinations of water exchanges, pumping stations, and off-channel storage facilities, each of which could affect the operations of the Bureau of Reclamation's (BOR) five headwaters reservoirs in the basin. The driver for the YRDSS is RiverWare, a systems-operations model used by BOR to calculate reservoir storage, irrigation deliveries, and streamflow at downstream locations resulting from changes in water supply and reservoir operations. The YRDSS uses output from RiverWare to calculate and summarize changes at 5 important flood plain reaches in the basin to 14 state variables: (1) habitat availability for selected life stages of four salmonid species, (2) spawning-incubation habitat persistence, (3) potential redd scour, (4) maximum water temperatures, (5) outmigration for bull trout (Salvelinus confluentus) from headwaters reservoirs, (6) outmigration of salmon smolts from Cle Elum Reservoir, (7) frequency of beneficial overbank flooding, (8) frequency of damaging flood events, (9) total deliverable water supply, (10) total water supply deliverable to junior water rights holders, (11) end-of-year reservoir carryover, (12) potential fine sediment transport rates, (13) frequency of events capable of armor layer disruption, and (14) geomorphic work performed during each water year. Output of the YRDSS consists of a series of conditionally formatted scoring tables, wherein the changes to a state variable resulting from an operational scenario are compiled and summarized. Increases in the values for state variables result in their respective backgrounds to turn green in the scoring matrix, whereas decreases in the values for state variables result in their respective backgrounds turning red. This convention was designed to provide decision makers with a quick visual assessment of the overall results of an operating scenario. An evaluation matrix and a variety of weighting strategies to reflect the relative importance of different state variables are also presented as options for further distillation of YRDSS results during the decision-making process.

Open-File Report↗

Streamflow and Endangered Species Habitat in the Lower Isleta Reach of the Middle Rio Grande

San Acacia Dam is located in a reach of the Rio Grande that has been designated as critical habitat for two endangered species, the Rio Grande silvery minnow (Hybognathus amarus) and the southwestern willow flycatcher (Empidonax traillii extimus). Under present operations, the Rio Grande upstream from the dam is used to convey irrigation water to the Socorro main canal at San Acacia Dam. In order to increase operational flexibility and improve irrigation delivery efficiency, the 'Bernardo Siphon' has been proposed to intercept up to 150 cubic feet per second from the Lower San Juan Riverside Drain on the east side of the Rio Grande and transport it under the river into a drainage canal on the west side. Irrigation deliveries to the Socorro main canal would be conveyed by way of the drainage canal rather than the Rio Grande. The objective of this study was to provide the Bureau of Reclamation (BOR) and other stakeholders with a tool to evaluate the effects of different operational modes of the Bernardo siphon on habitat for H. amarus and E. t. extimus in this section of river. We used a two-dimensional hydraulic simulation model to simulate hydraulic conditions for a range of discharges at three study sites in the Rio Grande between the proposed siphon location and San Acacia Dam. Suitable habitat characteristics were defined for H. amarus by consensus of a panel of experts and for E. t. extimus on the basis of a study conducted in 2003 by BOR. Habitat suitability maps for each targeted life stage and simulated discharge were constructed using a Geographic Information System (ArcGIS) and the results compiled into tables relating discharge to areas of suitable habitat. A separate analysis was conducted to calculate an index of connectivity among habitat patches at low flows. A hydrologic model was constructed to synthesize flows, by reach, without the siphon, which was used as a baseline for comparison with similarly-synthesized discharges with the siphon under different operating rules. Results from the hydrologic time series were combined with the discharge-habitat relations to develop habitat time series models, statistics, and scoring metrics for comparisons of alternative rules of operation for the Bernardo siphon. Suitable habitat for H. amarus was defined as areas having suitable hydraulic conditions alone and as areas having suitable hydraulics in association with large woody debris. Suitable hydraulic habitat for adults was maximized at discharges between 40 and 80 cubic feet per second, and declined rapidly at discharges larger than 150 cubic feet per second. When large woody debris was included in the definition of suitable habitat, discharges between 40 and 200 cubic feet per second provided maximum suitable habitat for adults. Juvenile hydraulic habitat was maximized at discharges between 20 and 80 cubic feet per second, and hydraulic habitat associated with large woody debris was largest at flows between 40 and 150 cubic feet per second. Nesting habitat area for E. t. extimus increased monotonically at discharges larger than 5 ft3/s, but decreased rapidly below that flow.

Open-File Report↗

A decision support framework for water management in the Upper Delaware River

The Delaware River Basin occupies an area of 12,765 square miles, in portions of south central New York, northeast Pennsylvania, northeast Delaware, and western New Jersey (fig. 1). The river begins as two streams in the Catskill Mountains, the East and West Branches. The two tributaries flow in a southwesterly direction until they meet at Hancock, N.Y. The length of the river from the mouth of Delaware Bay to the confluence at Hancock is 331 miles. Approximately 200 miles of the river between Hancock, N.Y., and Trenton, N.J., is nontidal.

Open-File Report↗

Application and testing of a procedure to evaluate transferability of habitat suitability criteria

A procedure designed to test the transferability of habitat suitability criteria was evaluated in the Cache la Poudre River, Colorado. Habitat suitability criteria were developed for active adult and juvenile rainbow trout in the South Platte River, Colorado. These criteria were tested by comparing microhabitat use predicted from the criteria with observed microhabitat use by adult rainbow trout in the Cache la Poudre River. A one-sided X 2 test, using counts of occupied and unoccupied cells in each suitability classification, was used to test for non-random selection for optimum habitat use over usable habitat and for suitable over unsuitable habitat. Criteria for adult rainbow trout were judged to be transferable to the Cache la Poudre River, but juvenile criteria (applied to adults) were not transferable. Random subsampling of occupied and unoccupied cells was conducted to determine the effect of sample size on the reliability of the test procedure. The incidence of type I and type II errors increased rapidly as the sample size was reduced below 55 occupied and 200 unoccupied cells. Recommended modifications to the procedure included the adoption of a systematic or randomized sampling design and direct measurement of microhabitat variables. With these modifications, the procedure is economical, simple and reliable. Use of the procedure as a quality assurance device in routine applications of the instream flow incremental methodology was encouraged.

Colorado↗

Summary of studies supporting cumulative effects analysis of upper Yellowstone River channel modifications

During the last several decades, portions of the upper Yellowstone River have been modified for flood control and erosion prevention. The U.S. Army Corps of Engineers is responsible for administration of a permit program for evaluating construction activities affecting rivers, streams, and wetlands. The Corps regulates activities under the authority of Section 10 of the Rivers and Harbors Act and Section 404 of the Clean Water Act. Since assumption of jurisdiction in the mid-1970’s, the Corps has processed a total of 156 permit actions for the upper Yellowstone River. Over two-thirds of the permit actions occurred during or after two consecutive large floods during 1996 and 1997. In response to concern regarding the potential environmental and ecological consequences of channel modification, the Corps, in conjunction with State and local government agencies, initiated a series of scientific studies to better understand the effects of channel modification in the upper Yellowstone River (Figure 1). These included preparation of wetland and riparian inventory maps (Bon, 2001); hydraulic modeling and flood-plain delineation; watershed land-cover assessment (Pick and Potter, 2003); historic bottomland use analysis (Brelsford and others, 2003); analysis of channel modification effects on fish habitat (Bowen and others, 2003); comparison of juvenile salmonid use of modified and unmodified habitats (Zale and Rider, 2003); analysis of riparian vegetation and flood-plain turnover (Merigliano and Polzin, 2003); study of the relations between riparian habitat and bird communities (Hansen and others, 2003); analyses of geomorphology and historical channel changes (Dalby and Robinson, 2003); socioeconomic assessment (BBC Research and Consulting, 2002); and sediment transport investigations and modeling (Holnbeck, 2003). This report is a summary of results from the individual scientific studies as they bear on future programmatic cumulative effects analyses of channel modification of the upper Yellowstone River. We do not attempt a formal, cumulative impact assessment in the sense of evaluating alternatives or future scenarios. The first section presents major findings of the resource studies in terms of temporal comparisons, spatial comparisons, and causal relations. In this section, we present a series of conceptual models or flow diagrams of the major causal pathways of cumulative impacts from channel modification. These represent major pathways of potential impact based on knowledge from other rivers, concerns expressed about the upper Yellowstone, and results from the scientific studies. These diagrams serve to focus interpretation of study results as either supporting or not supporting the importance and magnitude of particular causal relations and to identify key linking variables appearing in multiple causal pathways. These key variables that connect channel modification actions to multiple, valued environmental attributes can serve as the foundation for both projecting and monitoring future responses of the system. A section on analytical realities outlines some of the limitations of projecting cumulative impacts from channel modification of the upper Yellowstone River on meaningful spatial and temporal scales and some of the difficulties of interpreting results from studies conducted shortly after two extreme floods and substantial increases in channel modification. A section on classification describes the two primary geomorphic classification systems of the upper Yellowstone River used in the various individual resource studies. Each of these systems has been valuable in supporting field sampling and expressing results concerning patterns of variation. Their integration or revision into a classification system to achieve some new purpose, such as a regulatory program or monitoring system, will depend on a crisp articulation of riverine management or regulatory objectives. A section on key variables identifies those that are central to the causal pathways connecting channel modification to impacts and provides a rationale for key variables as an alternative to other tools such as Proper Functioning Condition (Barrett and others, 1993), Index of Biotic Integrity (Karr, 1981), or the Synoptic Approach (Liebowitz and others, 1992). This section also explains relations among key variable to Hydrogeomorphic (HGM) assessment procedures (Hauer and Smith, 1998; Hauer and others, 2001) and outlines how these 2 variables might be monitored to track cumulative impacts. Examples of how selected key variables can be quantified using Geographic Information System data sets developed from the resource studies are presented for one reach. The largest portion of the document is an Appendix that summarizes each of the individual scientific studies in terms of scope and methods, findings, principal variables, and metrics used in the study or suggested by the study results, and important needs for further study.

Montana↗

Effects of channel modification on fish habitat in the upper Yellowstone River: Final report to the USACE, Omaha

A two-dimensional hydrodynamic simulation model was coupled with a geographic information system (GIS) to produce a variety of habitat classification maps for three study reaches in the upper Yellowstone River basin in Montana. Data from these maps were used to examine potential effects of channel modification on shallow, slow current velocity (SSCV) habitats that are important refugia and nursery areas for young salmonids. At low flows, channel modifications were found to contribute additional SSCV habitat, but this contribution was negligible at higher discharges. During runoff, when young salmonids are most vulnerable to downstream displacement, the largest areas of SSCV habitat occurred in side channels, point bars, and overbank areas. Because of the diversity of elevations in the existing Yellowstone River, SSCV habitat tends to be available over a wide range of discharges. Based on simulations in modified and unmodified sub-reaches, channel simplification results in decreased availability of SSCV habitat, particularly during runoff. The combined results of the fish population and fish habitat studies present strong evidence that during runoff, SSCV habitat is most abundant in side channel and overbank areas and that juvenile salmonids use these habitats as refugia. Channel modifications that result in reduced availability of side channel and overbank habitats, particularly during runoff, will probably cause local reductions in juvenile abundances during the runoff period. Effects of reduced juvenile abundances during runoff on adult numbers later in the year will depend on (1) the extent of channel modification, (2) patterns of fish displacement and movement, (3) longitudinal connectivity between reaches that contain refugia and those that do not, and (4) the relative importance of other limiting factors.

Montana↗

Implications of flood pulse restoration for Populus regeneration on the upper Missouri River

We developed a mass balance flow model to reconstruct unregulated daily peak flows in the National Wild and Scenic reach of the Missouri River, Montana. Results indicated that although the observed frequency of large peak flows has not changed in the post-dam period, their magnitude has been reduced from 40 to 50% as a consequence of flow regulation. Reductions in the magnitude of these flows should reduce the expected frequency of large flood-pulses over a longer time-scale. Results of a two-dimensional hydraulic model indicated that limited cottonwood ( Populus deltoides subsp. Monilifera ) recruitment occurs at relatively small peak discharges, but to maximize establishment of cottonwoods in the Wild and Scenic reach, a threshold of 1850 m 3 /s would be necessary at the Virgelle gauge. Floods of this magnitude or greater lead to establishment of cottonwood seedlings above the zone of frequent ice-drive disturbance. Restoring the frequency, magnitude, duration and timing of these flood pulses would benefit important natural resource values including riparian cottonwood forests and native fish species in the upper Missouri River basin. However, efforts to naturalize flow must be made in the context of a water management system that was authorized and constructed for the primary purposes of flood control, power generation and irrigation. Using the synthesized flow model and flood damage curves, we examined six scenarios for delivering flows ≥1850 m 3 /s to the Wild and Scenic reach. Whereas some scenarios appeared to be politically and economically infeasible, our analysis suggested that there is enough operational flexibility in the system to restore more natural flood pulses without greatly compromising other values.

Missouri River↗

Stream habitat analysis using the instream flow incremental methodology

This document describes the Instream Flow Methodology in its entirety. This also is to serve as a comprehensive introductory textbook on IFIM for training courses as it contains the most complete and comprehensive description of IFIM in existence today. This should also serve as an official guide to IFIM in publication to counteract the misconceptions about the methodology that have pervaded the professional literature since the mid-1980's as this describes IFIM as it is envisioned by its developers. The document is aimed at the decisionmakers of management and allocation of natural resources in providing them an overview; and to those who design and implement studies to inform the decisionmakers. There should be enough background on model concepts, data requirements, calibration techniques, and quality assurance to help the technical user design and implement a cost-effective application of IFIM that will provide policy-relevant information. Some of the chapters deal with basic organization of IFIM, procedural sequence of applying IFIM starting with problem identification, study planning and implementation, and problem resolution.

Information and Technology Report↗

Relations between habitat variability and population dynamics of bass in the Huron River, Michigan

One of the assumption of the Instream Flow Incremental Methodology (IFIM) is that the dynamics of fish populations are directly or indirectly related to habitat availability. Because this assumption has not been successfully tested in coolwater streams, questions arise regarding the validity of the methodology in such streams. The purpose of our study was to determine whether relations existed between habitat availability and population dynamics of smallmouth bass ( Micropterus dolomieu ) and rock bass ( Ambloplites rupestris ) in a 16-km reach of the Huron River in southeastern Michigan. Both species exhibited strong to moderate carryover of year classes from age 0 through age 2, indicating that adult populations were related to factors affecting recruitment. Year-class strength and subsequent numbers of yearling bass were related to the availability of young-of-year habitat during the first growing season for a cohort. Number of age-0, age-1, and adult smallmouth bass were related to the average length at age 0 for the cohort. Length at age 0 was associated with young-of-year habitat and thermal regime during the first growing season. Rock bass populations exhibited similar associations among age classes and habitat variables. Compared to smallmouth bass, the number of age-2 rock bass was associated more closely with their length at age 0 than with year-class strength. Length at age 0 and year-class strength of rock bass were associated with the same habitat variables as those related to age-0 smallmouth bass. We hypothesize that an energetic mechanism linked thermal regime to length at age 0 and that increased growth resulted in higher survival rates from age 0 to age 1. We also postulate that young-of-year habitat provided protection from predators, higher production of food resources, and increased foraging efficiency. We conclude that the IFIM is a valid methodology for instream flow investigations of coolwater streams. The results for our study support the contention that the dynamics of bass populations are directly or indirectly related to habitat availability in coolwater streams. Our study also revealed several implications related to the operational application of the IFIM in coolwater streams: 1. Greater emphasis should be placed on the alleviation of habitat impacts to early life history phases of bass. 2. Effects of the thermal regime are important in some coolwater streams even if temperatures remain within nonlethal limits. Degree-day analyses should be routinely included in study plans for applications of the IFIM in coolwater streams. 3. The smallest amount of habitat occurring within or across years is not necessarily the most significant event affecting population dynamics. The timing of extreme events can be as important as their magnitude. 4. Population-related habitat limitations were associated with high flows more often than with low flows (although both occurred). Negotiations that focus only on minimum flows may preclude viable water management options and ignore significant biological events. This finding is particularly relevant to negotiations involving hydrospeaking operations. 5. IFIM users are advised to consider the use of binary criteria in place of conventional suitability index curves in microhabitat simulations. Criteria defining the optimal ranges of variables are preferable to broader rangers, and criteria that simply define suitable conditions should be avoided entirely.

Michigan↗

Development and evaluation of habitat suitability criteria for use in the instream flow incremental methodology

The Instream Flow Incremental Methodology (IFIM) is a habitat-based tool used to evaluate the environmental consequences of various water and land use practices. As such, knowledge about the conditions that provide favorable habitat for a species, and those that do not, is necessary for successful implementation of the methodology. In the context of IFIM, this knowledge is defined as habitat suitability criteria: characteristic behavioral traits of a species that are established as standards for comparison in the decision-making process. Habitat suitability criteria may be expressed in a variety of types and formats. The type, or category, refers to the procedure used to develop the criteria. Category I criteria are based on professional judgment, with little or no empirical data. Category II criteria have as their source, microhabitat data collected at locations where target organisms are observed or collected. These are called “utilization” functions because they are based on observed locations that were used by the target organism. These functions tend to be biased by the environmental conditions that were available to the fish or invertebrates at the time they were observed. Correction of the utilization function for environmental availability creates category III, or “preference” criteria, which tend to be much less site specific than category II criteria. There are also several ways to express habitat suitability in graphical form. The binary format establishes a suitable range for each variable as it pertains to a life stage of interest, and is presented graphically as a step function. The quality rating for a variable is 1.0 if it falls within the range of the criteria, and 0.0 if it falls outside the range. The univariate curve format established both the usable range and the optimum range for each variable, with conditions of intermediate usability expressed along the portion between the tails and the peak of the curve. Multivariate probability density functions, which can be used to compute suitability for several variables simultaneously, are conveyed as three dimensional figures with suitability on the z-axis, and two independent variables on the x-y plane. These functions are useful for incorporating interactive terms between two or more variable. Such interactions can also be demonstrated using conditional criteria, which are stratified by cover type or substrate size. Conditional criteria may be of any category or format, but are distinguishable by two or more sets of functional relationships for each life stage.

Report↗

Field testing and adaptation of a methodology to measure "in-stream" values in the Tongue River, northern Great Plains (NGP) region

A comprehensive, multi-component in-stream flow methodology was developed and field tested in the Tongue River in southeastern Montana. The methodology incorporates a sensitivity for the flow requirements of a wide variety of in-stream uses, and the flexibility to adjust flows to accommodate seasonal and sub-seasonal changes in the flow requirements for different areas. In addition, the methodology provides the means to accurately determine the magnitude of the water requirement for each in-stream use. The methodology can be a powerful water management tool in that it provides the flexibility and accuracy necessary in water use negotiations and evaluation of trade-offs. In contrast to most traditional methodologies, in-stream flow requirements were determined by additive independent methodologies developed for: 1) fisheries, including spawning, rearing, and food production; 2) sediment transport; 3) the mitigation of adverse impacts of ice; and 4) evapotranspiration losses. Since each flow requirement varied in important throughout the year, the consideration of a single in-stream use as a basis for a flow recommendation is inadequate. The study shows that the base flow requirement for spawning shovelnose sturgeon was 13.0 m 3 /sec. During the same period of the year, the flow required to initiate the scour of sediment from pools is 18.0 m 3 /sec, with increased scour efficiency occurring at flows between 20.0 and 25.0 m 3 /sec. An over-winter flow of 2.83 m 3 /sec. would result in the loss of approximately 80% of the riffle areas to encroachment by surface ice. At the base flow for insect production, approximately 60% of the riffle area is lost to ice. Serious damage to the channel could be incurred from ice jams during the spring break-up period. A flow of 12.0 m 3 /sec. is recommended to alleviate this problem. Extensive ice jams would be expected at the base rearing and food production levels. The base rearing flow may be profoundly influenced by the loss of streamflow to transpiration. Transpiration losses to riparian vegetation ranged from 0.78 m 3 /sec. in April, to 1.54 m 3 /sec. in July, under drought conditions. Requirement for irrigation were estimated to range from 5.56 m 3 /sec. in May to 7.97 m 3 /sec. in July, under drought conditions. It was concluded that flow requirements to satisfy monthly water losses to transpiration must be added to the base fishery flows to provide adequate protection to the resources in the lower reaches of the river. Integration of the in-stream requirements for various use components shows that a base flow of at least 23.6 m 3 /sec. must be reserved during the month of June to initiate scour of sediment from pools, provide spawning habitat to shovelnose sturgeon, and to accommodate water losses from the system. In comparison, a base flow of 3.85 m 3 /sec. would be required during early February to provide fish rearing habitat and insect productivity, and to prevent excessive loss of food production areas to surface ice formation. During mid to late February, a flow of 12 m 3 /sec. would be needed to facilitate ice break-up and prevent ice jams from forming. Following break-up, the base flow would again be 3.85 m 3 /sec. until the start of spawning season.

Northern Great Plains↗