Geology ReportsSearch

Geology topics

Joseph D. Zydlewski

Publications and source records attributed to Joseph D. Zydlewski.

104 records · Page 6Linked to original sources

Survival of migrating Atlantic salmon smolts through the Penobscot River, Maine: A pre-restoration assessment

Survival, distribution, and behavior of hatchery ( n = 493) and naturally reared ( n = 133) smolts of Atlantic salmon Salmo salar migrating through the Penobscot River and estuary in Maine were evaluated with acoustic telemetry in 2005 and 2006. Survival and use of a secondary migration path (the Stillwater Branch) were estimated with a multistate mark–recapture model. Higher rates of mortality per kilometer (range = 0.01–0.22) were observed near release sites and within reaches that contained three particular dams: Howland, West Enfield, and Milford dams. Estimated total survival of tagged hatchery smolts through entire individual reaches containing those dams ranged from 0.52 ( 0.18) to 0.94 ( 0.09), whereas survival through most of the reaches without dams exceeded 0.95. Of those smolts that survived to the Penobscot River–Stillwater Branch split at Marsh Island, most (≥74%) remained in the main stem around Marsh Island, where they experienced lower survival than fish that used the Stillwater Branch. Movement rates of hatchery-reared smolts were significantly lower through reaches containing dams than through reaches that lacked dams. Smolts arriving at dams during the day experienced longer delays than smolts arriving at night. Planned removal of two dams in this system is expected to enhance the passage of smolts through the main-stem corridor. However, the dams currently scheduled for removal (Great Works and Veazie dams) had less influence on smolt survival than some of the dams that will remain. This case study shows that by examining prerestoration migration dynamics throughout entire river systems rather than just in the vicinity of particular dams, tracking studies can help prioritize restoration efforts or predict the costs and benefits of future hydrosystem changes.

Maine

Habitat selection and overlap of Atlantic salmon and smallmouth bass juveniles in nursery streams

Introduced smallmouth bass Micropterus dolomieu have invaded much of the historic freshwater habitat of Atlantic salmon Salmo salar in North America, yet little is known about the ecological interactions between the two species. We investigated the possibility of competition for habitat between age-0 Atlantic salmon and age-0 and age-1 smallmouth bass by means of in situ observations and a mesocosm experiment. We used snorkel observation to identify the degree and timing of overlap in habitat use in our in situ observations and to describe habitat shifts by Atlantic salmon in the presence of smallmouth bass in our mesocosm experiments. In late July 2008, we observed substantial overlap in the depths and mean water column velocities used by both species in sympatric in situ conditions and an apparent shift by age-0 Atlantic salmon to shallower water that coincided with the period of high overlap. In the mesocosm experiments, we detected no overlap or habitat shifts by age-0 Atlantic salmon in the presence age-1 smallmouth bass and low overlap and no habitat shifts of Atlantic salmon and age-0 smallmouth bass in fall 2009. In 2009, summer floods with sustained high flows and low temperatures resulted in the nearly complete reproductive failure of the smallmouth bass in our study streams, and we did not observe a midsummer habitat shift by Atlantic salmon similar to that seen in 2008. Although this prevented us from replicating our 2008 experiments under similar conditions, the virtual year-class failure of smallmouth bass itself is enlightening. We suggest that future studies incorporate the effects of varying temperature and discharge to determine how abiotic factors affect the interactions between these species and thus mediate the outcomes of potential competition.

Transactions of the American Fisheries Society

Distribution and abundance of stream fishes in relation to barriers: implications for monitoring stream recovery after barrier removal

Dams are ubiquitous in coastal regions and have altered stream habitats and the distribution and abundance of stream fishes in those habitats by disrupting hydrology, temperature regime and habitat connectivity. Dam removal is a common restoration tool, but often the response of the fish assemblage is not monitored rigorously. Sedgeunkedunk Stream, a small tributary to the Penobscot River (Maine, USA), has been the focus of a restoration effort that includes the removal of two low-head dams. In this study, we quantified fish assemblage metrics along a longitudinal gradient in Sedgeunkedunk Stream and also in a nearby reference stream. By establishing pre-removal baseline conditions and associated variability and the conditions and variability immediately following removal, we can characterize future changes in the system associated with dam removal. Over 2 years prior to dam removal, species richness and abundance in Sedgeunkedunk Stream were highest downstream of the lowest dam, lowest immediately upstream of that dam and intermediate farther upstream; patterns were similar in the reference stream. Although seasonal and annual variation in metrics within each site was substantial, the overall upstream-to-downstream pattern along the stream gradient was remarkably consistent prior to dam removal. Immediately after dam removal, we saw significant decreases in richness and abundance downstream of the former dam site and a corresponding increase in fish abundance upstream of the former dam site. No such changes occurred in reference sites. Our results show that by quantifying baseline conditions in a small stream before restoration, the effects of stream restoration efforts on fish assemblages can be monitored successfully. These data set the stage for the long-term assessment of Sedgeunkedunk Stream and provide a simple methodology for assessment in other restoration projects.

Maine

Seasonal Distribution and Movements of Atlantic and Shortnose Sturgeon in the Penobscot River Estuary, Maine

Relatively little is known about the distribution and seasonal movement patterns of shortnose sturgeon Acipenser brevirostrum and Atlantic sturgeon Acipenser oxyrinchus oxyrinchus occupying rivers in the northern part of their range. During 2006 and 2007, 40 shortnose sturgeon (66–113.4 cm fork length [FL]) and 8 Atlantic sturgeon (76.2–166.2 cm FL) were captured in the Penobscot River, Maine, implanted with acoustic transmitters, and monitored using an array of acoustic receivers in the Penobscot River estuary and Penobscot Bay. Shortnose sturgeon were present year round in the estuary and overwintered from fall (mid-October) to spring (mid-April) in the upper estuary. In early spring, all individuals moved downstream to the middle estuary. Over the course of the summer, many individuals moved upstream to approximately 2 km of the downstream-most dam (46 river kilometers [rkm] from the Penobscot River mouth [rkm 0]) by August. Most aggregated into an overwintering site (rkm 36.5) in mid- to late fall. As many as 50% of the tagged shortnose sturgeon moved into and out of the Penobscot River system during 2007, and 83% were subsequently detected by an acoustic array in the Kennebec River, located 150 km from the Penobscot River estuary. Atlantic sturgeon moved into the estuary from the ocean in the summer and concentrated into a 1.5-km reach. All Atlantic sturgeon moved to the ocean by fall, and two of these were detected in the Kennebec River. Although these behaviors are common for Atlantic sturgeon, regular coastal migrations of shortnose sturgeon have not been documented previously in this region. These results have important implications for future dam removals as well as for rangewide and river-specific shortnose sturgeon management.

Maine

Long term retention, survival, growth, and physiological indicators of salmonids marked with passive integrated transponder tags

To track individuals in situ, over 12 million salmon and trout have been marked with passive integrated transponder (PIT) tags in the Columbia River Basin, USA. However, few studies have examined long term tag retention as well as tag effects on juvenile salmon and trout. We marked juvenile coho salmon Oncorhynchus kisutch (N = 207), steelhead (anadromous rainbow trout) O. mykiss (N = 221), cutthroat trout O. clarkii (N = 202) and bull trout Salvelinus confluentus (N = 180) with 12, 19, or 23 mm PIT tags and examined tag retention, survival, growth, and physiological performance over a six month period in a laboratory environment. PIT tag retention rates were high for coho salmon (100%), steelhead (95%), cutthroat trout (97%), and bull trout (99%), regardless of tag size. Survival was also high for coho (99%), steelhead (99%), cutthroat trout (97%), and bull trout (88%) and did not vary among tag sizes. Short term individual growth rates for coho salmon marked with 12 mm tags were significantly higher than those marked with 19 mm and 23 mm PIT tags. Likewise, steelhead trout individual growth rates were lower for fish marked with 23 mm PIT tags followed by 19 and 12 mm tags. Conversely, long-term growth rates were positive and not affected by tag size. There were no significant effects of tag size or marking on coho gill Na+, K+, -ATPase activity (µmol ADP x mg protein–1 h–1) and plasma osmolality (µmol kg–1) or bull trout hepatosomatic indices. Our study suggests that marking juvenile salmonids with PIT tags results in high retention with little effect upon their survival, growth, and important physiological indicators regardless of tag size in a laboratory environment.

American Fisheries Society Symposium

Assessing the effects of catch and release regulations on a quality adfluvial brook trout population using a computer based age-structure model

Assessing the Effects of Catch-and-Release Regulations on a Brook Trout Population Using an Age-Structured Model: North American Journal of Fisheries Management: Vol 30, No 6 <!-- publications og tags --> var _prum=[['id','54ff88bcabe53dc41d1004a5'],['mark','firstbyte',(new Date()).getTime()]];(function(){var s=document.getElementsByTagName('script')[0],p=document.createElement('script');p.async='async';p.src='//rum-static.pingdom.net/prum.min.js';s.parentNode.insertBefore(p,s);})(); (function (i, s, o, g, r, a, m) { i['GoogleAnalyticsObject'] = r; i[r] = i[r] || function () { (i[r].q = i[r].q || []).push(arguments) }, i[r].l = 1 * new Date(); a = s.createElement(o), m = s.getElementsByTagName(o)[0]; a.async = 1; a.src = g; m.parentNode.insertBefore(a, m) })(window, document, 'script', '//www.google-analytics.com/analytics.js', 'ga'); ga('create', 'UA-3062505-5' , 'auto' ); ga('set', 'dimension1', 'ujfm20'); ga('send', 'pageview'); As populations of wild brook trout Salvelinus fontinalis decline across the species' native range in North America, angling regulations such as fly-fishing only and catch and release are being used by management agencies to conserve fish while maintaining angling opportunities. Postrelease (hooking) mortality may significantly shift the age structure and size structure of populations. To assess the possible influence of catch-and-release fishing on brook trout population structure, we applied data from several sources to build a deterministic population model that included age-classes up to age 5. To assess the potential effect of fishing, we examined the changes in population density and age structure at varying levels of angler effort (0–400 angler-hours·ha −1 ·year −1 ) and hooking mortality rates (0–14%). Assuming a low (5%) hooking mortality rate, trophy brook trout density (ages 4 and 5) decreased by 50% at an angling intensity of 160 angler-hours·ha −1 ·year −1 . As angling effort increased, the proportion of older fish (ages 3–5) declined further. At very high levels of angling effort (>300 angler-hours·ha −1 ·year −1 ), age-4 and age-5 fish were eliminated from the population. Increases in postrelease mortality rates resulted in similar declines for older age-classes. The results of this simulation indicate that hooking mortality rates as might be common in catch-and-release fisheries may significantly shift the age structure of a population, thus reducing trophy angling potential.

North American Journal of Fisheries Management

Evidence of panmixia between sympatric life history forms of coastal cutthroat trout in two lower Columbia River tributaries

Coastal cutthroat trout Oncorhynchus clarkii clarkii exhibit resident and migratory life history strategies that often occur sympatrically, but the relationship between these forms within a population is poorly characterized. Through use of passive integrated transponder technology, migratory and resident coastal cutthroat trout were identified in two lower Columbia River tributaries (Abernathy Creek and the Chinook River) separated by more than 80 km. Genetic data from 17 highly variable microsatellite loci were used to ascertain the genetic population structure of these life history forms within and between streams. No distinct genetic separation was observed between the life history forms within a stream, as assessed by four different statistical approaches: permutation tests based on the genetic differentiation index F ST , principal components analysis of individuals, analysis of molecular variance, and contingency tests of allele frequency heterogeneity. Genetic differences were an order of magnitude higher between stream samples ( F ST > 0.03) than between life history forms within a stream ( F ST < 0.003). The contingency test detected allele frequency differences between migratory and resident life history forms in Abernathy Creek ( P = 0.001), but this result was influenced more by age-class structure than by reproductive isolation between life history forms. Results are consistent with a single, randomly mating population in each stream producing both migratory and resident life history forms. These data suggest that individual life history strategy in coastal cutthroat trout is predominantly determined by phenotypic plasticity rather than genotype.

Washington

Patterns of migration and residency in coastal cutthroat trout Oncorhynchus clarkii clarkii from two tributaries of the lower Columbia River

Coastal cutthroat trout Onchorhynchus clarkii clarkii life-history variants, migration and freshwater residency were monitored using stationary passive integrated transponder (PIT) tag arrays in two tributaries of the Columbia River from 2001 to 2005 (Abernathy Creek, river kilometre, rkm 76) and from 2002 to 2005 (Chinook River, rkm 6). In 2001-2003 and 2002-2003 (Abernathy and Chinook, respectively), 300-500 coastal O. c. clarkii were captured in each tributary by electrofishing and implanted with 23 mm PIT tags. PIT arrays monitored movements from the initiation of tagging through the spring of 2005. Rotary screw traps were also operated on both tributaries. In Abernathy Creek, 28% of tagged individuals were observed through either active capture or passive interrogation. Of these, 32% were identified as migrants and 68% were identified as residents. In the Chinook River, 48% of tagged fish were observed subsequent to tagging; 92% of these fish were migrants and only 8% were resident. In both tributaries, a greater proportion of resident fish were in the upper reaches. The majority of migrants (78-93%) moved the spring following tagging. Migrants leaving at age 2+ years tended to grow faster than those that migrated at age 3+ years or residents. Patterns of growth or growth opportunities may influence both patterns of life-history expression and the timing of migration. ?? 2009 The Fisheries Society of the British Isles.

Journal of Fish Biology

Summer movements of sub-adult brook trout, landlocked Atlantic salmon, and smallmouth bass in the Rapid River, Maine

Summer movement patterns and spatial overlap of native sub-adult brook trout ( Salvelinus fontinalis ), non-native landlocked Atlantic salmon ( Salmo salar ), and non-native smallmouth bass ( Micropterus dolomieu ) in the Rapid River, Maine, were investigated with radio telemetry in 2005. Fishes were captured by angling, surgically implanted with radio transmitters, and tracked actively from June through September. Most brook trout (96%) and landlocked salmon (72%) displayed long distance movements (>1 km) to open water bodies (28 June to 4 July) followed by periods of time spent in presumed thermal refigia (5 July to 16 September). Summer water temperature rose above 25 &deg;C, near the reported lethal limits for these coldwater species. In contrast, the majority of smallmouth bass (68%), a warrnwater species, did not make long distance movements from areas of initial capture, remaining in mainstem sections of the river (28 June to 16 September). Spatial overlap of smallmouth bass and brook trout in the summer is unlikely because brook trout presumably move to thermal rehgia during this time. However, interspecific competition between brook trout and landlocked salmon may occur since they select similar habitats June through September.

Maine

Remote monitoring of fish in small streams: A unified approach using PIT tags

Accurate assessments of fish populations are often limited by re-observation or recapture events. Since the early 1990s, passive integrated transponders (PIT tags) have been used to understand the biology of many fish species. Until recently, PIT applications in small streams have been limited to physical recapture events. To maximize recapture probability, we constructed PIT antenna arrays in small streams to remotely detect individual fish. Experiences from two different laboratories (three case studies) allowed us to develop a unified approach to applying PIT technology for enhancing data assessments. Information on equipment, its installation, tag considerations, and array construction is provided. Theoretical and practical definitions are introduced to standardize metrics for assessing detection efficiency. We demonstrate how certain conditions (stream discharge, vibration, and ambient radio frequency noise) affect the detection efficiency and suggest that by monitoring these conditions, expectations of efficiency can be modified. We emphasize the importance of consistently estimating detection efficiency for fisheries applications.

Fisheries

The loss of hyperosmoregulatory ability in migrating juvenile American shad, Alosa sapidissima

Investigations on juvenile American shad ( Alosa sapidissima ) revealed several physiological changes associated with downstream migration. Plasma chloride decreased 20% in wild juvenile shad during the autumn migration. Migrants had lower condition factor and hematocrit than non-migrant shad captured by beach seining. Gill Na + ,K + -ATPase activity of migrant shad was higher than non-migrant; a 2.5-fold increase was observed in 1993, while a 57% increase was observed in 1994. Similar changes were observed in laboratory studies of shad maintained in fresh water under simulated natural temperature and photoperiod. Plasma chloride dropped 68% and gill Na + ,K + -ATPase activity increased 3-fold over a 3-month period. Decreased plasma chloride was associated with increased mortality. Increases in gill Na + ,K + -ATPase activity decreases in plasma chloride and osmolality, and incidence of mortality were delayed and moderated, but not eliminated, in shad maintained at constant temperature (24°C). Shad did not survive in fresh water past December regardless of temperature regime. In seawater, all shad survived and showed no perturbation of plasma chloride at 24°C or simulated natural temperature (above 4°C). The decline in hyperosmoregulatory ability, as influenced by declining temperatures, may serve as a proximate cue for autumnal migration.

Canadian Journal of Fisheries and Aquatic Sciences