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Jonathan M. Nelson

Publications and source records attributed to Jonathan M. Nelson.

49 records · Page 3Linked to original sources
USGS2009

Numerical simulation of dune-flat bed transition and stage‐discharge relationship with hysteresis effect

This work presents recent advances on morphodynamic modeling of bed forms under unsteady discharge. This paper includes further development of a morphodynamic model proposed earlier by Giri and Shimizu (2006a). This model reproduces the temporal development of river dunes and accurately replicates the physical properties associated with bed form evolution. Model results appear to provide accurate predictions of bed form geometry and form drag over bed forms for arbitrary steady flows. However, accurate predictions of temporal changes of form drag are key to the prediction of stage‐discharge relation during flood events. Herein, the model capability is extended to replicate the dune–flat bed transition, and in turn, the variation of form drag produced by the temporal growth or decay of bed forms under unsteady flow conditions. Some numerical experiments are performed to analyze hysteresis of the stage‐discharge relationship caused by the transition between dune and flat bed regimes during rising and falling stages of varying flows. The numerical model successfully simulates dune–flat bed transition and the associated hysteresis of the stage‐discharge relationship; this is in good agreement with physical observations but has been treated in the past only using empirical methods. A hypothetical relationship for a sediment parameter (the mean step length) is proposed to a first level of approximation that enables reproduction of the dune–flat bed transition. The proposed numerical model demonstrates its ability to address an important practical problem associated with bed form evolution and flow resistance in varying flows.

Water Resources Research↗
USGS2009

Simulation of streamflow using a multidimensional flow model for white sturgeon habitat, Kootenai River near Bonners Ferry, Idaho – Supplement to Scientific Investigations Report 2005-5230

During 2005, the U.S. Geological Survey (USGS) developed, calibrated, and validated a multidimensional flow model for simulating streamflow in the white sturgeon spawning habitat of the Kootenai River in Idaho. The model was developed as a tool to aid understanding of the physical factors affecting quality and quantity of spawning and rearing habitat used by the endangered white sturgeon (Acipenser transmontanus) and for assessing the feasibility of various habitat-enhancement scenarios to re-establish recruitment of white sturgeon. At the request of the Kootenai Tribe of Idaho, the USGS extended the two-dimensional flow model developed in 2005 into a braided reach upstream of the current white sturgeon spawning reach. Many scientists consider the braided reach a suitable substrate with adequate streamflow velocities for re-establishing recruitment of white sturgeon. The 2005 model was extended upstream to help assess the feasibility of various strategies to encourage white sturgeon to spawn in the reach. At the request of the Idaho Department of Fish and Game, the USGS also extended the two-dimensional flow model several kilometers downstream of the white sturgeon spawning reach. This modified model can quantify the physical characteristics of a reach that white sturgeon pass through as they swim upstream from Kootenay Lake to the spawning reach. The USGS Multi-Dimensional Surface-Water Modeling System was used for the 2005 modeling effort and for this subsequent modeling effort. This report describes the model applications and limitations, presents the results of a few simple simulations, and demonstrates how the model can be used to link physical characteristics of streamflow to the location of white sturgeon spawning events during 1994-2001. Model simulations also were used to report on the length and percentage of longitudinal profiles that met the minimum criteria during May and June 2006 and 2007 as stipulated in the U.S. Fish and Wildlife Biological Opinion.

Idaho↗
USGS2006

Flow resistance dynamics in step‐pool channels: 2. Partitioning between grain, spill, and woody debris resistance

In step‐pool stream channels, flow resistance is created primarily by bed sediments, spill over step‐pool bed forms, and large woody debris (LWD). In order to measure resistance partitioning between grains, steps, and LWD in step‐pool channels we completed laboratory flume runs in which total resistance was measured with and without grains and steps, with various LWD configurations, and at multiple slopes and discharges. Tests of additive approaches to resistance partitioning found that partitioning estimates are highly sensitive to the order in which components are calculated and that such approaches inflate the values of difficult‐to‐measure components that are calculated by subtraction from measured components. This effect is especially significant where interactions between roughness features create synergistic increases in resistance such that total resistance measured for combinations of resistance components greatly exceeds the sum of those components measured separately. LWD contributes large proportions of total resistance by creating form drag on individual pieces and by increasing the spill resistance effect of steps. The combined effect of LWD and spill over steps was found to dominate total resistance, whereas grain roughness on step treads was a small component of total resistance. The relative contributions of grain, spill, and woody debris resistance were strongly influenced by discharge and to a lesser extent by LWD density. Grain resistance values based on published formulas and debris resistance values calculated using a cylinder drag approach typically underestimated analogous flume‐derived values, further illustrating sources of error in partitioning methods and the importance of accounting for interaction effects between resistance components.

Water Resources Research↗
USGS2006

Monitoring changes in the Platte River riparian corridor with serial LiDAR surveys

The Platte River in central Nebraska is a wide, sand-bedded river that provides habitat for migratory water birds along the North American flyway. The central Platte River functions as critical habitat for the endangered whooping crane (Grus americana) and also is an important habitat for the endangered least tern (Sterna antillarum) and the threatened piping plover (Charadrius melodus). Upstream water-resource development over the last century has decreased the water and sediment supplied to the central Platte River. This has resulted in vegetation encroachment and narrowing of Platte River channels. The National Academy of Sciences' National Research Council, in a recent review of these critical habitat designations, concluded that the current morphology of Platte River channels is limiting the recovery of the endangered and threatened avian species. Habitat-enhancement efforts along the Platte River currently (2006) are focused on the clearing of vegetation from in-channel and riparian areas, whereas future plans propose the release of water from upstream dams as a means to prevent vegetation from encroaching on the active river channel. For this reason, monitoring the physical response of the river channel to these management treatments is an important component of a proposed habitat recovery program. Understanding the effects of management strategies on Platte River riparian habitat also is a key objective of the U.S. Geological Survey's Platte River Priority Ecosystem Program (http://mcmcweb.er.usgs.gov/platte/). This fact sheet describes applications of LiDAR to monitor changes in the Platte River riparian corridor.

Fact Sheet↗
USGS2006

Channel morphology and bed-sediment characteristics before and after riparian vegetation clearing in the Cottonwood Ranch, Platte River, Nebraska, water years 2001-2004

Riparian areas along a reach of Platte River passing through Nebraska Public Power District's Cottonwood Ranch Property were modified during 2002 to 2004 to enhance in-channel habitats for endangered and threatened avian species. A component of this alteration involved the removal of riparian vegetation from riverbanks and islands to provide roosting habitat for the endangered whooping crane and to provide nesting and foraging habitat for the endangered least tern and threatened piping plover. It was hypothesized that the removal of riparian vegetation could have the effect of stimulating channel widening in this reach by increasing the potential of these surfaces to erode under natural fluvial action. It also was hypothesized that as a direct or indirect consequence of the alterations, a local increase in sediment supply also might occur, potentially resulting in geomorphic change downstream and possibly initiating negative third-party effects. The cumulative effects of the management activities on the channel morphology and sediment transport in this reach were monitored during water years 2001-2004 by measuring transect elevation profiles and bed-sediment-size gradations upstream, within, and downstream from the managed area before and after the development activities. An analysis of variance (ANOVA) was performed to determine if the geomorphic variables measured before and after the development activities were significantly different. Although statistically significant differences were detected in some of the variables, increases in mean bed elevation did not occur in a greater percentage of the monitoring sections measured downstream compared to upstream from the management activities. This result suggests that the management activities did not have a substantial effect on the downstream river channel morphology and sediment transport. However, it is important to place these short-term and site-specific results in the context that river flows following the management activities were at historical low rates, and therefore the potential to affect and the opportunity to detect possible geomorphic change within and downstream from the managed reach were limited.

Scientific Investigations Report↗
USGS2005

Variation in the reference Shields stress for bed load transport in gravel‐bed streams and rivers

The present study examines variations in the reference shear stress for bed load transport (τ r ) using coupled measurements of flow and bed load transport in 45 gravel‐bed streams and rivers. The study streams encompass a wide range in bank‐full discharge (1–2600 m 3 /s), average channel gradient (0.0003–0.05), and median surface grain size (0.027–0.21 m). A bed load transport relation was formed for each site by plotting individual values of the dimensionless transport rate W * versus the reach‐average dimensionless shear stress τ*. The reference dimensionless shear stress τ* r was then estimated by selecting the value of τ* corresponding to a reference transport rate of W * = 0.002. The results indicate that the discharge corresponding to τ* r averages 67% of the bank‐full discharge, with the variation independent of reach‐scale morphologic and sediment properties. However, values of τ* r increase systematically with average channel gradient, ranging from 0.025–0.035 at sites with slopes of 0.001–0.006 to values greater than 0.10 at sites with slopes greater than 0.02. A corresponding relation for the bank‐full dimensionless shear stress τ* bf , formulated with data from 159 sites in North America and England, mirrors the relation between τ* r and channel gradient, suggesting that the bank‐full channel geometry of gravel‐ and cobble‐bedded streams is adjusted to a relatively constant excess shear stress, τ* bf − τ* r , across a wide range of slopes.

Water Resources Research↗
USGS2005

Simulation of flow and sediment mobility using a multidimensional flow model for the White Sturgeon critical-habitat reach, Kootenai River near Bonners Ferry, Idaho

In 1994, the Kootenai River white sturgeon (Acipenser transmontanus) was listed as an Endangered Species as a direct result of two related observations. First, biologists observed that the white sturgeon population in the Kootenai River was declining. Second, they observed a decline in recruitment of juvenile sturgeon beginning in the 1950s with an almost total absence of recruitment since 1974, following the closure of Libby Dam in 1972. This second observation was attributed to changes in spawning and (or) rearing habitat resulting from alterations in the physical habitat, including flow regime, sediment-transport regime, and bed morphology of the river. The Kootenai River White Sturgeon Recovery Team was established to find and implement ways to improve spawning and rearing habitat used by white sturgeon. They identified the need to develop and apply a multidimensional flow model to certain reaches of the river to quantify physical habitat in a spatially distributed manner. The U.S. Geological Survey has addressed these needs by developing, calibrating, and validating a multidimensional flow model used to simulate streamflow and sediment mobility in the white sturgeon critical-habitat reach of the Kootenai River. This report describes the model and limitations, presents the results of a few simple simulations, and demonstrates how the model can be used to link physical characteristics of streamflow to biological or other habitat data. This study was conducted in cooperation with the Kootenai Tribe of Idaho along a 23-kilometer reach of the Kootenai River, including the white sturgeon spawning reach near Bonners Ferry, Idaho that is about 108 to 131 kilometers below Libby Dam. U.S. Geological Survey's MultiDimensional Surface-Water Modeling System was used to construct a flow model for the critical-habitat reach of the Kootenai River white sturgeon, between river kilometers 228.4 and 245.9. Given streamflow, bed roughness, and downstream water-surface elevation, the model computes the velocity field, water-surface elevations, and boundary shear stress throughout the modeled reach. The 17.5 kilometer model reach was subdivided into two segments on the basis of predominant grain size: a straight reach with a sand, gravel, and cobble substrate located between the upstream model boundary at river kilometer 245.9 and the upstream end of Ambush Rock at river kilometer 244.6, and a meandering reach with a predominately sand substrate located between upstream end of Ambush Rock and the downstream model boundary at river kilometer 228.4. Model cell size in the x and y (horizontal) dimensions is 5 meters by 5 meters along the computational grid centerline with 15 nodes in the z (vertical) dimension. The model was calibrated to historical streamflows evenly distributed between 141.6 and 2,548.9 cubic meters per second. The model was validated by comparing simulated velocities with velocities measured at 15 cross sections during steady streamflow. These 15 cross sections were each measured multiple (7-13) times to obtain velocities suitable for comparison to the model results. Comparison of modeled and measured velocities suggests that the model does a good job of reproducing flow patterns in the river, although some discrepancies were noted. The model was used to simulate water-surface elevation, depth, velocity, bed shear stress, and sediment mobility for Kootenai River streamflows of 170, 566, 1,130, 1,700, and 2,270 cubic meters per second (6,000, 20,000, 40,000, 60,000, and 80,000 cubic feet per second). The three lowest streamflow simulations represent a range of typical river conditions before and since the construction of Libby Dam, and the highest streamflow simulation (2,270 cubic meters per second) is approximately equal to the annual median peak streamflow prior to emplacement of Libby Dam in 1972. Streamflow greater than 566 cubic meters per second were incrementally increased by 570 cubic meters per second. For each

Scientific Investigations Report↗
USGS1998

Interactions between pool geometry and hydraulics

An experimental and computational research approach was used to determine interactions between pool geometry and hydraulics. A 20-m-long, 1.8-m-wide flume was used to investigate the effect of four different geometric aspects of pool shape on flow velocity. Plywood sections were used to systematically alter constriction width, pool depth, pool length, and pool exit-slope gradient, each at two separate levels. Using the resulting 16 unique geometries with measured pool velocities in four-way factorial analyses produced an empirical assessment of the role of the four geometric aspects on the pool flow patterns and hence the stability of the pool. To complement the conclusions of these analyses, a two-dimensional computational flow model was used to investigate the relationships between pool geometry and flow patterns over a wider range of conditions. Both experimental and computational results show that constriction and depth effects dominate in the jet section of the pool and that pool length exhibits an increasing effect within the recirculating-eddy system. The pool exit slope appears to force flow reattachment. Pool length controls recirculating-eddy length and vena contracta strength. In turn, the vena contracta and recirculating eddy control velocities throughout the pool.

Water Resources Research↗
USGS1995

Role of near-bed turbulence in bedload transport

Bedload transport by a turbulent fluid moving over an erodible sediment bed results from complex interactions between flow field of the overlying fluid and the grains making up the bed. To develop a better view of these interactions, a method that combines high-speed photography with laser-Doppler velocimetry was devised. The methodology permits correlation of bedload transport with local turbulence structure at a frequency resolution of 10 hz. By making a suite of measurements at varying distances from a backward step, data were obtained for a variety of flows with different turbulence characteristics ranging from steady, uniform boundary layers to highly intermittent, nonuniform wake-like flows.

Conference Paper↗
USGS1990

The initial instability and finite-amplitude stability of alternate bars in straight channels

The initial instability and fully developed stability of alternate bars in straight channels are investigated using linearized and nonlinear analyses. The fundamental instability leading to these features is identified through a linear stability analysis of the equations governing the flow and sediment transport fields. This instability is explained in terms of topographically induced steering of the flow and the associated pattern of erosion and deposition on the bed. While the linear theory is useful for examining the instability mechanism, this approach is shown to yield relatively little information about well-developed alternate bars and, specifically, the linear analysis is shown to yield poor predictions of the fully developed bar wavelength. A fully nonlinear approach is presented that permits computation of the evolution of these bed features from an initial perturbation to their fully developed morphology. This analysis indicates that there is typically substantial elongation of the bar wavelength during the evolution process, a result that is consistent with observations of bar development in flumes and natural channels. The nonlinear approach demonstrates that the eventual stability of these features is a result of the interplay between topographic steering effects, secondary flow production as a result of streamline curvature, and gravitationally induced modifications of sediment fluxes over a sloping bed.

Earth-Science Reviews↗