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Jessica Goretzke

Publications and source records attributed to Jessica Goretzke.

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Factors affecting short-term post-release survival probability of Lake Trout implanted with acoustic telemetry transmitters

The use of acoustic telemetry is steadily expanding to help answer questions related to habitat use, movement, and behavior of fishes. Significant time and resources are invested to start acoustic telemetry studies; therefore, careful planning is needed to limit post-release mortality of tagged individuals. Deep, cold-water species present additional challenges to acoustic tagging because of changes in temperature and pressure experienced during capture. The objective of our study was to determine if capture method, surface water temperature, water depth, or fish size influenced short-term post-release survival of a deep, cold-water species, Lake Trout Salvelinus namaycush . In 2023, 299 Lake Trout were captured with angling or gillnets across Lake Ontario (Laurentian Great Lake – U.S. & CAN) and surgically implanted with acoustic transmitters. We estimated 30-day post-release mortality and 24-h post-release distance traveled for tagged Lake Trout. We used Cox proportional hazards models to identify factors affecting survival probability and multiple linear regression to identify factors affecting post-release distance traveled. Thirty-day post-release mortality was minimal (9.03 %, 27/299 Lake Trout); however, mortality was 6.37 times more likely for Lake Trout captured in gillnets compare to angling ( p = 0.003). Lake Trout length had a marginally significant effect on mortality ( p = 0.052) but capture depth and temperature did not ( p > 0.05). Lake Trout post-release distance traveled was not significantly influenced by capture gear, depth, temperature, or Lake Trout length ( p = 0.61). Our results indicate that tagging-induced post-release mortality is minimal for Lake Trout tagged in the spring, but survival can be increased by avoiding use of gillnets.

Lake Ontario

Lake Ontario August gillnet survey and Lake Trout assessment, 2024

Lake Ontario Lake Trout ( Salvelinus namaycush ) rehabilitation has been assessed with fishery independent surveys to evaluate program benchmarks and compare observations with management objectives since 1983. These surveys provide information on the abundance, strain composition, and performance of stocked Lake Trout, as well as information on levels of natural recruitment, and Sea Lamprey ( Petromyzon marinus ) wounding rates. In 2024, the gillnet survey occurred in United States (US) and Canadian waters marking the first lake-wide Lake Trout assessment since 2008. Lake Trout catch per unit effort (CPUE) was higher in US than Canadian waters. Recaptures of stocked fish with coded wire tags occurred mostly in US waters, and were composed of the following strains: Lake Champlain, Seneca Lake, Superior Klondike Reef, and Huron Parry Sound. Percentage of naturally produced Lake Trout in US waters continued to be relatively low for mature and immature fish. Interestingly, the percentage of naturally produced Lake Trout was higher in Canadian waters, despite lower total numbers of Lake Trout caught. Sea Lamprey wounding rates on Lake Trout > 432 mm in 2024 were above management targets in US and Canadian waters. Overall, the 2024 survey results suggest that Lake Trout indicators continue to meet some of the management objectives and show spatial differences in overall abundance and the proportion of stocked vs wild fish between the US and Canadian stocks.

Lake Ontario

Lake Ontario spring prey fish bottom trawl survey and Alewife assessment, 2025

The multi-agency Lake Ontario spring prey fish survey quantifies changes in pelagic prey fish populations, in particular Alewife Alosa pseudoharengus , which are the primary prey supporting the lake’s sport fishes. The 2025 survey included 230 trawls in the main lake and embayments and sampled depths from 5.5 to 245 m (15 – 810 ft). The survey captured 504,541 fish from 33 species with a total weight of 7,301 kg (16,095 lbs). Alewife were 85% of the total catch numerically, while Yellow Perch Perca flavescens , Round Goby Neogobius melanostomus , Deepwater Sculpin Myoxocephalus thompsonii , and Rainbow Smelt Osmerus mordax , comprised 5%, 4%, 3%, and 1% of the catch, respectively. The Alewife biomass index decreased from 2024 to 2025 (83 to 78 kg·ha -1 ) however due to an abundant 2024 Alewife year class the density index increased from 3,727 to 9,182 fish per ha -1 . The Age-1 biomass (2024 year class) was 27.5 kg·ha -1 , which was the greatest value estimated in the modern time series (since 1997). The abundance estimate for the 2024 Alewife year class (13.8 billion) was more than three times the number of all other Alewife combined (3.6 billion). Adult Alewife abundance decreased in 2025 which was consistent with predictions from 2024. Those predictive models suggested that adult Alewife biomass is likely to increase in 2026 and 2027, as the 2024 year class matures. Alewife condition declined in 2025, which was expected given the relatively high Alewife density. Acoustic-based prey fish densities were greater than previous years acoustic estimates especially at depths from 180 – 220 m (591 – 722 ft), however acoustic based densities continue to be substantially lower than trawl-based densities. The 2025 biomass index was similar to 2024 for Emerald Shiner Notropis atherinoides and Threespine Stickleback Gasterosteus aculeatus , but was lower for Rainbow Smelt, and higher for Cisco Coregonus artedi . Three purported Bloater Coregonus hoyi were caught in the 2025 survey. Analysis of archived tissue identified five Bloater captured in previous surveys which increased the total number caught in Lake Ontario bottom trawl surveys to n = 24, since restoration stocking began in 2012. Whole lake density estimates of Lake Whitefish Coregonus clupeaformis increased in 2025 relative to 2024. Those density increases were due to increased catches in Canadian waters, as density in U.S. waters has remained low. The density index for wild or naturally reproduced juvenile Lake Trout Salvelinus namaycush increased in 2025 relative to 2024, with the most frequent catches occurring in waters around the Niagara River.

Lake Ontario

Lake Ontario April prey fish survey results and Alewife assessment, 2024

The Lake Ontario April bottom trawl survey assesses pelagic prey fish populations, in particular Alewife Alosa pseudoharengus , which are the primary prey supporting the lake’s sport fish populations. The 2024 survey included 234 trawls in the main lake and embayments and sampled depths from 3.9 to 245 m (13 – 809 ft). The survey captured 441,942 fish from 28 species with a total weight of 10,519 kg (23,142 lbs.). Alewife were 89% of the total catch by number while Deepwater Sculpin Myoxocephalus thompsonii , Round Goby Neogobius melanostomus , and Rainbow Smelt Osmerus mordax , comprised 4%, 3%, and 2% of the catch respectively. The estimated Alewife biomass increases slightly from 2023 to 2024 (83.9 to 84.2 kg·ha-1) and was the largest biomass value since whole lake sampling began in 2016. Adult Alewife abundance increased in 2024 as predicted in 2023, and most of the total Alewife biomass was comprised of adult fish (97%), predominantly from the 2020 and 2022 year classes. In contrast, Age-1 Alewife biomass (2.2 kg·ha-1) was the lowest estimated since whole lake sampling began in 2016 (previous range: 2.7 – 26.7 kg·ha-1), indicating reproductive success was poor in 2023. Adult Alewife biomass is predicted to remain relatively high but decline slightly in 2025 and 2026, due to the smaller year classes produced in 2021 and 2023. Alewife condition as measured by the weight of a standard length fish (165 mm; ~6.5 inches), was 32.8 g, which was within of the range of previously observed values (28.0 – 35.9 g, 1997 – 2023). Acoustic-based prey fish densities, in the water above the bottom trawl, were similar to observations from 2021 – 2023 and were orders of magnitude lower than bottom trawl densities. These acoustic results support the seasonal timing of the April survey, when the majority of Alewife and other pelagic prey fishes are near the lake bottom and susceptible to capture with bottom trawls. The trawl survey also provides information on the status of other pelagic prey fishes and native fish restorations. In 2024, biomass indices for Rainbow Smelt, Emerald Shiner Notropis atherinoides , and Threespine Stickleback Gasterosteus aculeatus , were similar to 2023 values while the index for Cisco Coregonus artedi declined. The density index for naturally reproduced, juvenile Lake Trout Salvelinus namaycush declined relative to 2023. Density estimates of Lake Whitefish Coregonus clupeaformis continue to be orders of magnitude lower in U.S. waters relative to Canadian waters. A single purported Bloater Coregonus hoyi (total length = 148 mm, sampling depth = 105 m) was captured near Rochester, NY during the 2024 survey. This is the eighth Bloater recaptured during this survey since restoration stocking began in 2012.

Lake Ontario

Lake Ontario April prey fish survey results and Alewife assessment, 2023

The April bottom trawl survey and Alewife Alosa pseudoharengus population assessment provides science to inform Lake Ontario fisheries management. The 2023 survey included 215 trawls in the main lake and embayments, and sampled depths from 6.5 to 252 m (21-833 ft). The survey captured 1,012,178 fish from 32 species with a total weight of 12,136 kg (26,700 lbs.). Alewife were 92% of the catch by number while Rainbow Smelt, Osmerus mordax , Deepwater Sculpin, Myoxocephalus thompsonii , and Round Goby, Neogobius melanostomus , comprised 3%, 3%, and 1% of the catch, respectively. To improve the accuracy of prey fish biomass and density estimates we reanalyzed trawl sensor data from each of three participating survey vessels and created vessel-specific relationships predicting how bottom trawl bottom contact time, wing width, and area-swept varies with depth. Total Alewife biomass increased in 2023 due to growth and survival of the abundant 2020 year class (now age-3) and an abundant 2022 year class (age-1). The 2023 mean Alewife biomass (81.1 kg·ha -1 ) was the largest since whole lake sampling began in 2016 and was the ninth largest value observed in the modern time series (1997-2023, maximum value in 2000 = 91.8 kg·ha -1 ). The 2023 Alewife density (6795 n·ha -1 ) was the greatest density observed in the modern time series. These high biomass and density values are due to above average Alewife reproductive success in 2020 and 2022. Simulation modeling suggests the 2024 and 2025 Alewife biomass index may be substantially higher than the 2023 observations. In 2023, the Rainbow Smelt biomass index increased relative to the 2022 index, as did the biomass index for Cisco, Coregonus artedi . In contrast, Emerald Shiner Notropis atherinoides and Threespine Stickleback Gasterosteus aculeatus , biomass values continue to be low (< 0.01 kg·ha -1 ). Three Bloater Coregonus hoyi , were captured during the 2023 survey. Hydroacoustic sampling conducted during the bottom trawl survey estimated prey fish densities in pelagic habitats not sampled by the bottom trawl (3 m below the surface to 3 m above the lake bottom) and these densities were hundreds to thousands of times lower than bottom trawl-based densities. These results support the idea that, in April, when the warmest water is on the lake bottom, Alewife and most other pelagic prey fish are near the lake bottom and can be effectively sampled with bottom trawling.

Lake Ontario

Lake Ontario April prey fish survey results and Alewife assessment, 2022

The annual Lake Ontario April bottom trawl survey and Alewife, Alosa pseudoharengus , population assessment provide science to inform management decisions related to predator-prey balance and fish community dynamics. The 2022 survey was conducted from March 31 to April 26, included 235 trawls in the main lake and embayments, and sampled depths from 5 to 219 m (16 – 723 ft). The survey captured 311,770 fish from 30 species with a total weight of 7,740 kg (17,028 lbs.). Alewife were 85% of the catch by number while Rainbow Smelt, Osmerus mordax , Round Goby, Neogobius melanostomus , and Deepwater Sculpin, Myoxocephalus thompsonii , comprised 6%, 4%, and 4% of the catch, respectively. The 2022 biomass index for Rainbow Smelt decreased 80% relative to the high values observed in 2021 as did the value for Cisco, Coregonus artedi , (46% decline). Emerald Shiner, Notropis atherinoides , biomass index increased in 2021 and Threespine Stickleback, Gasterosteus aculeatus , biomass remained low. No Bloater, Coregonus hoyi , were captured during the 2022 survey. In 2022, Alewife biomass in U.S. waters (58.1 kilograms per hectare, kg·ha-1) was substantially higher than Canadian waters (26.3 kg·ha-1). The 2022 Alewife biomass index (41.6 kg·ha-1) decreased 10% from 2021 while the 2022 density index decreased 62% from 2021. Prediction modeling indicated the growth of the abundant 2020 Alewife year class, sampled as age-1 fish in 2021, would cause the adult Alewife biomass to increase in 2022. Although the adult Alewife biomass did increase relative to 2021 (61%), the increase was lower than predicted. The difference between the predictions and observations was because survival of age-1 fish from 2021 to 2022 was lower than had previously been observed. In the three previous years of observations the proportion of age-1 Alewife surviving to age 2 ranged from 0.33 to 0.53; however, that proportion was only 0.21 from 2021 to 2022. Survival estimates of Alewife age-5 through age-8 were higher than previously observed, possibly because salmonid predation focused on the abundant younger Alewife. The catch of age-1 Alewife in 2022, which is a measure of reproductive success in 2021, was below average and similar to the abundances of the 2018 and 2019 year classes. Simulation modeling results indicated the adult Alewife biomass is likely to increase slightly in 2023, whereas predictions for 2024 are less certain. Hydroacoustic sampling was used to estimate prey fish densities in open-water, pelagic habitats not sampled by the bottom trawl. Bottom trawl-based densities from the lake bottom were at least 25 times greater than densities of prey fish in the water column above the trawl. These results support the idea that, in April, when the warmest, most dense water is on the lake bottom, Alewife and most other pelagic prey fish primarily inhabit deep, near bottom habitats and can be effectively sampled with bottom trawling.

Lake Ontario

Lake trout rehabilitation in Lake Ontario, 2020

Each year we report on the progress toward rehabilitation of the Lake Ontario lake trout (Salvelinus namaycush) population, including the results of stocking, annual assessment surveys, creel surveys, and evidence of natural reproduction observed from standard surveys performed by USGS and NYSDEC. Response to the COVID-19 pandemic limited survey effort such that spring and summer bottom trawl surveys and the creel survey were not completed in 2020, and sites sampled during the fall gillnet survey were limited to those east of Rochester, NY. The catch per unit effort of adult lake trout in gill nets increased each year from 2008-2014, recovering from historic lows recorded during 2005-2007. Adult abundances declined each year from 2015 to 2017; and in 2017 were about 35% below the 2014 peak and 17% below the 1999-2004 mean. Adult abundance increased in 2018 by 51% over the 2017 value and remained nearly stable between 2018 and 2020. The 2020 rate of wounding by sea lamprey (Petromyzon marinus) on lake trout caught in gill nets was 2.27 A1 wounds (fresh wound) per 100 lake trout and was near target (2 wounds per 100 lake trout). Condition values for adult lake trout, indexed in September from the predicted weight for a 700 mm lake trout from annual length-weight regressions and Fulton’s K for age-6 males, were among the highest levels observed for the 1983-2020 time series. Reproductive potential for the adult stock indexed from the CPUE of mature females ≥ 4000 g was again above the target in 2020 continuing a trend observed in nine of the last ten years. The 2020 catch of young wild lake trout marked the 26th observation in the last 27 years, however the low numbers of native adults observed during that time period continues to indicate substantial restoration impediments still exist.

Lake Ontario

Bottom trawl assessment of benthic preyfish community in Lake Ontario

Since 1978, the Lake Ontario benthic preyfish survey has provided information on the status and trends of the benthic preyfish community related to Lake Ontario Fish Community Objectives that include understanding preyfish population dynamics and community diversity. Beginning in 2015, the benthic preyfish survey expanded from US-only to incorporate lake-wide sampling sites which drastically increased the survey’s spatial coverage. In 2020, the collaborative benthic preyfish survey completed 82 bottom trawl tows across main lake and embayment sites at depths from 6 to 226 m. Compared to previous years, the survey was largely confined to ports east of Rochester on the US side, and east of Wesleyville on the Canadian side due to COVID-19 travel constraints. In total, the survey sampled 109,315 fish from 32 species in 2020. Round goby was the most numerically abundant species comprising 59% of total catch, followed by alewife (27%), and deepwater sculpin (7%). Despite being a common species represented in historical catches, slimy sculpin comprised only 0.05% of the total catch, with only 53 fish sampled in 2020. Annual biomass indices were among the lowest reported for slimy sculpin across the entire time series, whereas deepwater sculpin biomass remained high but showed a decrease from values observed in 2019. Deepwater sculpin condition in 2020 was lower than in 2019 but similar to values observed in 2017-2018. Community diversity remained high relative to historically lower values when round goby and deepwater sculpin were not captured in trawl catches. Round goby biomass in 2020 was the highest on the US time series, but not on the lake-wide series, highlighting the need to resume lake-wide sampling to further understand how regional vs lake-wide sampling affects benthic preyfish population estimates.

Lake Ontario

Lake Ontario April prey fish survey and Alewife assessment, 2021

The Lake Ontario April bottom trawl survey and Alewife, Alosa psuedoharengus population assessment are conducted annually to track prey fish community status and aid management decisions related to predator-prey balance. No survey was conducted in 2020 due to the Covid-19 pandemic. The 2021 survey included 248 bottom trawls in both U.S. and Canadian waters, from March 30 - May 7 in the main lake and embayment regions, at depths ranging from 5 – 221 m (16 - 729 ft). The survey captured 947,102 fish, from 30 species with a total weight of 9,191 kg (20,220 lbs). Alewife were 89.2% of the catch by number while Rainbow Smelt, Osmerus mordax , Round Goby Neogobius melanostomus , and Deepwater Sculpin Myoxocephalus thompsonii comprised 5.6, 2.3, and 1.7% of the catch, respectively. Rainbow Smelt biomass in 2021 was among the highest values observed since 1997, especially in U.S. waters. The biomass index for Cisco, Coregonus artedii also increased, primarily due to catches and greater survey effort in the Bay of Quinte. Threespine stickleback, Gasterosteus aculeatus and Emerald Shiner, Notropis atherinoides biomasses remain low. No Bloater, Coregonus hoyi were captured during the 2021 survey. In 2021, the lake-wide Alewife biomass index increased substantially from 2019 due to the presence of an exceptionally high catch of age-1 Alewife (2020 year class). The biomass index of adult Alewife (age-2 and up) declined slightly since 2019, which was expected since Alewife reproduction was generally below average from 2016 to 2019. Expanding the survey spatial extent from U.S. waters to a lake-wide survey in 2016 has improved our ability to estimate Alewife survival and has provided more accurate estimates of Lake Ontario Alewife biomass and density. Simulation modeling based on recent estimates of survival, growth, and reproduction suggests the adult Alewife biomass will likely increase in 2022 and 2023. As part of a continued effort to improve prey fish surveys, we employed hydroacoustic sampling during the 2021 April trawl survey to estimate fish densities in open-water, pelagic habitats not sampled by the bottom trawl. We found fish density, in waters above the trawl headline depth (3m off bottom to surface), were approximately ~100 times lower than pelagic prey fish densities from bottom trawls. These results support the idea that at this time of year, when the warmest water is on the lake bottom, Alewife and most other prey fish primarily inhabit deep, near bottom regions and can be effectively sampled with bottom trawls. We were not able to apportion acoustics targets to species, however the low mean target strength (-43 decibels, dB) suggested these were small fishes (e.g., 100 mm). The greatest hydroacoustics densities were found near the Niagara River confluence and future surveys may use midwater trawls to determine which species these were and continue to improve this multi-agency survey.

Lake Ontario