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Jake Weltzin

Publications and source records attributed to Jake Weltzin.

At least 19 recordsLinked to original sources

Artificial intelligence strategy for the U.S. Geological Survey

Artificial intelligence (AI) can offer opportunities to enhance the science, science delivery, and business operations of the U.S. Geological Survey (USGS). Although USGS staff have proactively adopted AI into our workflows for many years, a comprehensive USGS strategy for AI has not previously been developed. The strategy described here is motivated by the acceleration of AI technological development, the benefits of increased AI adoption to USGS mission delivery as anticipated by USGS staff, rising public concern about the implications and trustworthiness of AI, and emerging Federal directives and guidance about AI. The USGS vision is to continue integrating AI to deliver valuable science for the public good while maintaining high ethical standards, scientific quality and integrity, and compliance with Federal and U.S. Department of the Interior requirements. To realize this vision, the USGS can take steps to (1) develop a strong AI workforce, (2) adapt our organizational approaches to include AI governance and communication, (3) ensure responsible and trustworthy use of AI, (4) modernize our computing and data infrastructure to support AI, and (5) accelerate AI adoption and innovation in the Bureau.

Circular↗

Recent scientific contributions by the U.S. Geological Survey in the San Francisco Bay and Sacramento–San Joaquin Delta Estuary

Introduction The San Francisco Bay and Sacramento–San Joaquin Delta Estuary (hereafter, Bay-Delta) is the largest estuary on the West Coast of the United States. The Bay-Delta covers more than 1,600 square miles and drains a watershed of more than 75,000 square miles, which is greater than 40 percent of California. The region surrounding the Bay-Delta is home to about 10 million people, and its habitats (fig. 1) support more than 800 plant and animal species. The waterways of the Bay-Delta are the central hub of California’s extensive freshwater delivery system, supplying water to more than 27 million Californians and 4 million acres of farmland in the Central Valley. The U.S. Geological Survey (USGS) is the primary science agency of the U.S. Department of the Interior, providing a broad range of Earth, water, biological, and mapping data and expertise to inform natural resource management across the country. This fact sheet focuses on research conducted by the USGS in the Bay-Delta region, mostly within the past 5 years. The fact sheet is organized across five major themes: water flow and water quality, fish and wildlife, wetland restoration, invasive species, and hazards. In each of these areas, the USGS works closely with Federal, State, and local agencies; academia; and non-governmental organizations to provide objective, evidence-based science. The data and knowledge gained from USGS research and monitoring are publicly available and are routinely used by agencies, including the U.S. Bureau of Reclamation, U.S. Army Corps of Engineers, U.S. Fish and Wildlife Service, California Department of Water Resources, California Department of Fish and Wildlife, California State Water Resources Control Board, Delta Stewardship Council, and many additional organizations and stakeholders to inform management of the Bay-Delta region and its resources.

California↗

The NEON Ecological Forecasting Challenge

The 21st century continues to be characterized by major changes to the environment and the ecosystem services upon which society depends. Anticipating and responding to these changes requires that scientists explicitly forecast future conditions in real time (Dietze et al . 2018 ). Ecological forecasting, like weather and epidemiological forecasting, involves integrating data and models to generate quantitative predictions of the future state of ecological systems before observations are collected. The iterative cycle of creating forecasts, evaluating them with new observations, updating the models, and then making new forecasts has the potential to accelerate learning across many ecological subdisciplines. This cycle builds on openly available data, often published soon after collection, as is increasingly common in ecological observatory networks, such as the National Ecological Observatory Network (NEON). To accelerate improvements in ecological forecasting, we designed and launched the NEON Ecological Forecasting Challenge (hereafter, “Challenge”) (Figure 1 ), an open platform for the ecological and data science communities to forecast NEON data before they are collected.

Frontiers in Ecology and the Environment↗

U.S. Geological Survey landscape science strategy 2020–2030

Across our Nation, multiple Federal, State, Tribal, and local governments are working with stakeholders and landowners to restore, conserve, and manage lands and resources to benefit fish, wildlife, and people. One of the largest Federal efforts is led by the U.S. Department of the Interior (DOI), with multiple DOI agencies working to conserve and manage public lands, resources, and cultural heritage for the benefit and enjoyment of current and future generations. As a science provider within the DOI, the U.S. Geological Survey (USGS) has an important role in developing actionable science products that can inform decision making on public lands and across all of our Nation’s landscapes. Our landscapes and resources are undergoing continual change from a complex and interacting suite of stressors that include traditional and nontraditional land uses, a changing climate, a dynamic economy, and a culturally diverse and ever-changing society. Landscape science seeks to understand how the physical, biological, and social components of ecosystems and landscapes interact with each other and are affected by these stressors across local to global scales. The USGS has developed this landscape science strategy to focus and strengthen the agency’s efforts to inform critical conservation, restoration, and management decisions for American landscapes. The strategy directly supports the overarching 21st-century science strategy of the USGS and expands our perspective and focus on partnerships, including with internal, external, traditional, and nontraditional partners. The vision for USGS landscape science is to integrate multiple disciplines and approaches to create and deliver relevant, timely, and scientifically sound products that enable our partners to make informed decisions about how to manage complex interacting natural and human systems across changing American landscapes. This strategy seeks to leverage the expertise, data, analytical capacity, and tools of the agency and to strengthen integration of science efforts across programs and scales. A cornerstone of the strategy is working closely with landowners and resource managers to identify the science that is needed to inform management actions, and then working collaboratively with those same partners to coproduce science and data products that are timely, practical, and useful for their decision making. Many individual efforts within the USGS already embrace landscape science ideas and practices. With the development of this strategy, we are seeking to build on these efforts and to focus agency attention and expertise on expanding, connecting, and institutionalizing core practices and approaches for landscape science that produces actionable science products and tools that decision makers can use to help conserve and manage American landscapes.

Circular↗

PS3: The Pheno-Synthesis software suite for integration and analysis of multi-scale, multi-platform phenological data

Phenology is the study of recurring plant and animal life-cycle stages which can be observed across spatial and temporal scales that span orders of magnitude (e.g., organisms to landscapes). The variety of scales at which phenological processes operate is reflected in the range of methods for collecting phenologically relevant data, and the programs focused on these collections. Consideration of the scale at which phenological observations are made, and the platform used for observation, is critical for the interpretation of phenological data and the application of these data to both research questions and land management objectives. However, there is currently little capacity to facilitate access, integration and analysis of cross-scale, multi-platform phenological data. This paper reports on a new suite of software and analysis tools – the “Pheno-Synthesis Software Suite,” or PS3 – to facilitate integration and analysis of phenological and ancillary data, enabling investigation and interpretation of phenological processes at scales ranging from organisms to landscapes and from days to decades. We use PS3 to investigate phenological processes in a semi-aride, mixed shrub-grass ecosystem, and find that the apparent importance of seasonal precipitation to vegetation activity (i.e., “greenness”) is affected by the scale and platform of observation. We end by describing potential applications of PS3 to phenological modeling and forecasting, understanding patterns and drivers of phenological activity in real-world ecosystems, and supporting agricultural and natural resource management and decision-making.

Ecological Informatics↗

Seasonality of biological and physical systems as indicators of climatic variation and change

Evidence-based responses to climate change by society require operational and sustained information including biophysical indicator systems that provide up-to-date measures of trends and patterns against historical baselines. Two key components linking anthropogenic climate change to impacts on socio-ecological systems are the periodic inter- and intra-annual variations in physical climate systems (seasonality) and in plant and animal life cycles (phenology). We describe a set of national indicators that reflect sub-seasonal to seasonal drivers and responses of terrestrial physical and biological systems to climate change and variability at the national scale. Proposed indicators and metrics include seasonality of surface climate conditions (e.g., frost and freeze dates and durations), seasonality of freeze/thaw in freshwater systems (e.g., timing of stream runoff and durations of lake/river ice), seasonality in ecosystem disturbances (e.g., wildfire season timing and duration), seasonality in vegetated land surfaces (e.g., green-up and brown-down of landscapes), and seasonality of organismal life-history stages (e.g., timings of bird migration). Recommended indicators have strong linkages to variable and changing climates, include abiotic and biotic responses and feedback mechanisms, and are sufficiently simple to facilitate communication to broad audiences and stakeholders interested in understanding and adapting to climate change.

Climatic Change↗

Ecological forecasting—21st century science for 21st century management

Natural resource managers are coping with rapid changes in both environmental conditions and ecosystems. Enabled by recent advances in data collection and assimilation, short-term ecological forecasting may be a powerful tool to help resource managers anticipate impending near-term changes in ecosystem conditions or dynamics. Managers may use the information in forecasts to minimize the adverse effects of ecological stressors and optimize the effectiveness of management actions. To explore the potential for ecological forecasting to enhance natural resource management, the U.S. Geological Survey (USGS) convened a workshop titled "Building Capacity for Applied Short-Term Ecological Forecasting" on May 29—31, 2019, with participants from several Federal agencies, including the Bureau of Land Management, the U.S. Fish and Wildlife Service, the National Park Service, and the National Oceanic and Atmospheric Administration as well as all mission areas within the USGS. Participants broadly agreed that short-term ecological forecasting—on the order of days to years into the future—has tremendous potential to improve the quality and timeliness of information available to guide resource management decisions. Participants considered how ecological forecasting could directly affect their agency missions and specified numerous critical tools for addressing natural resource management concerns in the 21st century that could be enhanced by ecological forecasting. Given this breadth of possible applications for forecast products, participants developed a repeatable framework for evaluating potential value of a forecast product for enhancing resource management. Applying that process to a large list of forecast ideas that were developed in a brainstorming session, participants identified a small set of promising forecast products that illustrate the value of ecological forecasting for informing resource management. Workshop outcomes also include insights about important likely obstacles and next steps. In particular, reliable production and delivery of operational ecological forecasts will require a sustained commitment by research agencies, in partnership with resource management agencies, to maintain and improve forecasting tools and capabilities.

Open-File Report↗

Community for data integration 2018 funded project report

The U.S. Geological Survey Community for Data Integration annually funds small projects focusing on data integration for interdisciplinary research, innovative data management, and demonstration of new technologies. This report provides a summary of the 10 projects funded in fiscal year 2018, outlining their goals, activities, and accomplishments.

Open-File Report↗

Bridging the research-management gap: Landscape ecology in practice on public lands in the western United States

The field of landscape ecology has grown and matured in recent decades, but incorporating landscape science into land management decisions remains challenging. Many lands in the western United States are federally owned and managed for multiple uses, including recreation, conservation, and energy development. We argue for stronger integration of landscape science into the management of these public lands. We open by outlining the relevance of landscape science for public land planning, management, and environmental effects analysis, including pertinent laws and policies. We identify challenges to integrating landscape science into public land management, including the multijurisdictional nature and complicated spatial pattern of public lands, the capacity of agencies to identify and fill landscape science needs, and public perceptions about the meaning of landscape approaches to management. We provide several recent examples related to landscape monitoring, restoration, reclamation, and conservation in which landscape science products were developed specifically to support decision-making. We close by highlighting three actions - elevating the importance of science-management partnerships dedicated to coproducing actionable landscape science products, identifying where landscape science could foster efficiencies in the land-use planning process, and developing scenario-based landscape models for shrublands - that could improve landscape science support for public land planners and managers.

Arizona, California, Colorado, Idaho, Montana, New↗

Short-term forecasts of insect phenology inform pest management

Insect pests cost billions of dollars per year globally, negatively impacting food crops and infrastructure, and contributing to the spread of disease. Timely information regarding developmental stages of pests can facilitate early detection and control, increasing efficiency and effectiveness. In 2018, the U.S. National Phenology Network (USA-NPN) released a suite of ‘Pheno Forecast’ map products relevant to science and management. The Pheno Forecasts include real-time maps and short-term forecasts of insect pest activity at management-relevant spatial and temporal resolutions and are based on accumulated temperature thresholds associated with critical life-cycle stages of economically important pests. Pheno Forecasts indicate, for a specified day, the status of the insect’s target life-cycle stage in real time across the contiguous United States. The maps are available for 12 pest species including the invasive emerald ash borer ( Agrilus planipennis Fairmaire [Coleoptera: Buprestidae]), hemlock woolly adelgid ( Adelges tsugae Annand), and gypsy moth ( Lymantria dispar Linnaeus [Lepidoptera: Erebidae]). Preliminary validation based on in-situ observations for hemlock woolly adelgid egg and nymph stages in 2018 indicated the maps to be ≥93% accurate depending on phenophase. Since their release in early 2018, these maps have been adopted by tree care specialists and foresters across the United States. Using a consultative mode of engagement, USA-NPN staff have continuously sought input and critique of the maps and delivery from end users. Based on feedback received, maps have been expanded and modified to include additional species, improved descriptions of the phenophase event of interest, and e-mail-based notifications to support management decisions.

Annals of the Entomological Society of America↗

Climate change effects on biodiversity, ecosystems, ecosystem services, and natural resource management in the United States

Climate change is a pervasive and growing global threat to biodiversity and ecosystems. Here, we present the most up-to-date assessment of climate change impacts on biodiversity, ecosystems, and ecosystem services in the U.S. and implications for natural resource management. We draw from the 4th National Climate Assessment to summarize observed and projected changes to ecosystems and biodiversity, explore linkages to important ecosystem services, and discuss associated challenges and opportunities for natural resource management. We find that species are responding to climate change through changes in morphology and behavior, phenology, and geographic range shifts, and these changes are mediated by plastic and evolutionary responses. Responses by species and populations, combined with direct effects of climate change on ecosystems (including more extreme events), are resulting in widespread changes in productivity, species interactions, vulnerability to biological invasions, and other emergent properties. Collectively, these impacts alter the benefits and services that natural ecosystems can provide to society. Although not all impacts are negative, even positive changes can require costly societal adjustments. Natural resource managers need proactive, flexible adaptation strategies that consider historical and future outlooks to minimize costs over the long term. Many organizations are beginning to explore these approaches, but implementation is not yet prevalent or systematic across the nation.

Science of the Total Environment↗

Time to branch out? Application of hierarchical survival models in plant phenology

The sensitivity of phenology to environmental drivers can vary across geography and species. As such, models developed to predict phenology are typically site- or taxon-specific. Generation of site- and taxon-specific models is limited by the intensive in-situ phenological monitoring effort required to generate sufficient data to parameterize each model. Where in-situ phenological observations exist, the data are often subject to analytical issues due to the limited duration of any individual monitoring program, spotty site- and species- level coverage, lack of standardized methodology, and infrequent or variable census intervals. Together, these characteristics constrain our ability to make phenological inferences outside of select sites and taxa where long-duration, intensive monitoring has occurred. In this study, we leveraged two national, standardized phenology datasets to develop a multi-species and multi-site state-space survival model of the onset of deciduous tree and shrub spring (leaf out) and fall (leaf-color) events across temperate ecoregions of the United States. We used data from two national-scale phenological databases, a 9-year, broadly distributed dataset from the USA National Phenology Network and a 4-year dataset from the National Ecological Observatory Network, to quantify regional and interspecific variation in sensitivity to environmental drivers for both spring and fall leaf phenophases. Spring leaf out was generally promoted by longer days, spring growing degree day accumulation, overwinter chilling, and was suppressed by frost events, whereas fall leaf color was promoted by shorter days and cold accumulation. The sensitivity to most environmental drivers tended to be more variable among species than among the regions as defined here (EPA ecoregions of North America, excluding desert and tropical areas). The results of this study lay the groundwork for incorporating the growing collection of phenological observations into a generalized framework for predicting the transition states for any species, in any location.

Agricultural and Forest Meteorology↗

2018 USA National Phenology Annual Report

This report provides a very high-level summary of some of the USA-NPN’s accomplishments over the past year. The purpose is to share with USA-NPN funders, partners, and the general public the value of the organization.

Report↗

Pheno forecasts predict seasonal activity of pest and invasive species to support decision making

The USA National Phenology Network’s Pheno Forecast maps indicate the status of insect pest or invasive plant life cycle stages in real time across the contiguous United States. This information can guide when to monitor or to undertake management activities. These maps, available at 2.5 km spatial resolution, are updated daily and are available six days into the future. Pheno Forecast maps are now available for 12 insect pest species and for one invasive grass species.

Report↗

Differential changes in the onset of spring across US National Wildlife Refuges and North American migratory bird flyways

Warming temperatures associated with climate change can have indirect effects on migratory birds that rely on seasonally available food resources and habitats that vary across spatial and temporal scales. We used two heat-based indices of spring onset, the First Leaf Index (FLI) and the First Bloom Index (FBI), as proxies of habitat change for the period 1901 to 2012 at three spatial scales: the US National Wildlife Refuge System; the four major bird migratory flyways in North America; and the seasonal ranges (i.e., breeding and non-breeding grounds) of two migratory bird species, Blue-winged Warbler ( Vermivora cyanoptera ) and Whooping Crane ( Grus americana ). Our results show that relative to the historical range of variability, the onset of spring is now earlier in 76% of all wildlife refuges and extremely early (i.e., exceeding 95% of historical conditions) in 49% of refuges. In all flyways but the Pacific, the rate of spring advance is generally greater at higher latitudes than at lower latitudes. This differential rate of advance in spring onset is most pronounced in the Atlantic flyway, presumably because of a “warming hole” in the southeastern US. Both FLI and FBI have advanced markedly in the breeding ranges–but not the non-breeding ranges–of the two selected bird species, albeit with considerable intra-range variation. Differences among species in terms of migratory patterns and the location and extent of seasonal habitats, as well as shifts in habitat conditions over time, may complicate predictions of the vulnerability of migratory birds to climate change effects. This study provides insight into how differential shifts in the phenology of disparate but linked habitats could inform local- to landscape-scale management strategies for the conservation of migratory bird populations.

PLoS ONE↗

MonitoringResources.org—Supporting coordinated and cost-effective natural resource monitoring across organizations

Natural resource managers who oversee the Nation’s resources require data to support informed decision-making at a variety of spatial and temporal scales that often cross typical jurisdictional boundaries such as states, agency regions, and watersheds. These data come from multiple agencies, programs, and sources, often with their own methods and standards for data collection and organization. Coordinating standards and methods is often prohibitively time-intensive and expensive. MonitoringResources.org offers a suite of tools and resources that support coordination of monitoring efforts, cost-effective planning, and sharing of knowledge among organizations. The website was developed by the Pacific Northwest Aquatic Monitoring Partnership—a collaboration of Federal, state, tribal, local, and private monitoring programs—and the U.S. Geological Survey (USGS), with funding from the Bonneville Power Administration and USGS. It is a key component of a coordinated monitoring and information network.

Fact Sheet↗

USA National Phenology Network observational data documentation

The goals of the USA National Phenology Network (USA-NPN, www.usanpn.org ) are to advance science, inform decisions, and communicate and connect with the public regarding phenology and species’ responses to environmental variation and climate change. The USA-NPN seeks to advance the science of phenology and facilitate ecosystem stewardship by providing phenological information freely and openly. To accomplish these goals, the USA-NPN National Coordinating Office (NCO) delivers observational data on plant and animal phenology in several formats, including minimally processed status and intensity datasets and derived phenometrics for individual plants, sites, and regions. This document describes the suite of observational data products delivered by the USA National Phenology Network, covering the period 2009–present for the United States and accessible via the Phenology Observation Portal ( http://dx.doi.org/10.5066/F78S4N1V ) and via an Application Programming Interface. The data described here have been used in diverse research and management applications, including over 30 publications in fields such as remote sensing, plant evolution, and resource management.

Open-File Report↗

A science products inventory for citizen-science planning and evaluation

Citizen science involves a range of practices involving public participation in scientific knowledge production, but outcomes evaluation is complicated by the diversity of the goals and forms of citizen science. Publications and citations are not adequate metrics to describe citizen-science productivity. We address this gap by contributing a science products inventory (SPI) tool, iteratively developed through an expert panel and case studies, intended to support general-purpose planning and evaluation of citizen-science projects with respect to science productivity. The SPI includes a collection of items for tracking the production of science outputs and data practices, which are described and illustrated with examples. Several opportunities for further development of the initial inventory are highlighted, as well as potential for using the inventory as a tool to guide project management, funding, and research on citizen science.

BioScience↗