Geology topics

J. Zarnetske

Publications and source records attributed to J. Zarnetske.

2 recordsLinked to original sources

USGS2020

Experimental shifts of hydrologic residence time in a sandy urban stream sediment-water interface alter nitrate removal and nitrous oxide fluxes

The sediment–water interfaces (SWI) of streams serve as important biogeochemical hotspots in watersheds and contribute to whole-catchment reactive nitrogen budgets and water-quality conditions. Recently, the SWI has been identified as an important source of nitrous oxide (N 2 O) produced in streams, with SWI residence time among the principal controls on its production. Here, we conducted a series of controlled manipulations of SWI exchange in an urban stream that has high dissolved N 2 O concentrations and where we concurrently evaluated less-mobile porosity dynamics. Our experiments took place within isolated portions of two sediment types: a coarse sandy stream bed resulting from excess road-sand application in the watershed, and a coarse sand mixed with clay and organic particles. In these manipulation experiments we systematically varied SWI vertical-flux rates and residence times to evaluate their effect on the fate of nitrate and production rates of N 2 O. Our experiments demonstrate that the fate and transport of nitrate and N 2 O production are influenced by hydrologic flux rates through SWI sediments and associated residence times. Specifically, we show that manipulations of hydrologic flux systematically shifted the depth of the bulk oxic–anoxic interface in the sediments, and that nitrate removal increased with residence time. Our results also support the emerging hypothesis of a ‘Goldilocks’ timescale for the production of nitrous oxide, when transport and reaction timescales favor incomplete denitrification. Areal N 2 O production rates were up to threefold higher during an intermediate residence-time experiment, compared to shorter or longer residence times. In our companion study we documented that the studied sediments were dominated by a long-residence-time less-mobile porosity domain, which could explain why we observed N 2 O production even in bulk-oxic sediments. Overall, we have experimentally demonstrated that changes to SWI hydrologic residence times and SWI substrate associated with urbanization can change the biogeochemical function of the river corridor.

Massachusetts↗

USGS2020

Formation criteria for hyporheic anoxic microzones: Assessing interactions of hydraulics, nutrients and biofilms

Recent experimental studies have detected the presence of anoxic microzones in hyporheic sediments. These microzones are small‐scale anoxic pores, embedded within oxygen‐rich porous media and can act as anaerobic reaction sites producing reduction compounds such as nitrous oxide, a potent greenhouse gas. Microbes are a key control on nutrient transformation in hyporheic sediment, but their associated biomass growth is also capable of altering hydraulic flux, leading to potential bioclogging. Here, we developed one of the first computational modeling approaches that combined hydraulics and microbial conditions to explore the continuous evolution of microzones in stream sediments. The model assessed stream and sediment conditions with different hydraulic flux (0.1–1.0 m/day Darcy flux), nutrient concentrations (O 2 = 8 mg/L, OrgC = 20 mg/L, NO − 3 = 1.5–3 mg/L, and NH 3 = 0.5–1 mg/L), and biomass scenarios (with and without). The model domain is a pore network model with random sized pore‐throat radii creating heterogeneous and anisotropic flow that is representative of a natural streambed composed of medium sand with a hydraulic conductivity of 0.8 m/day. Results from 30 day simulations indicate that hyporheic microzone formation will occur and microzone distributions are not simply controlled by residence time alone, rather by the complex interactions of hydraulic flux, nutrient concentrations, and biomass, with bioclogging having strong feedbacks on both hydraulics and nutrients. Under all conditions with biomass growth, anoxic microzones were unstable, perishing a few days after formation, because bioclogging primarily occurs near the influent (downwelling) area of the hyporheic zone. In turn, this bioclogging shifts transport conditions from advection‐dominated to diffusion‐dominated transport, removing all oxic regions in the hyporheic zone. Overall, results from the modeling show that anoxic microzones are likely to form under many hyporheic zone conditions, and be dynamic through space and time as they are dependent on both hydraulic flux and nutrient transport.

Water Resources Research↗