Geology ReportsSearch

Geology topics

Felisa Wolfe-Simon

Publications and source records attributed to Felisa Wolfe-Simon.

5 recordsLinked to original sources

A novel photosynthetic strategy for adaptation to low-iron aquatic environments

Iron (Fe) availability is a major limiting factor for primary production in aquatic environments. Cyanobacteria respond to Fe deficiency by derepressing the isiAB operon, which encodes the antenna protein IsiA and flavodoxin. At nanomolar Fe concentrations, a PSI−IsiA supercomplex forms, comprising a PSI trimer encircled by two complete IsiA rings. This PSI−IsiA supercomplex is the largest photosynthetic membrane protein complex yet isolated. This study presents a detailed characterization of this complex using transmission electron microscopy and ultrafast fluorescence spectroscopy. Excitation trapping and electron transfer are highly efficient, allowing cyanobacteria to avoid oxidative stress. This mechanism may be a major factor used by cyanobacteria to successfully adapt to modern low-Fe environments.

Biochemistry

Paleoenvironmental implications of taxonomic variation among δ 15 N values of chloropigments

Natural variations in the ratios of nitrogen isotopes in biomass reflect variations in nutrient sources utilized for growth. In order to use δ 15 N values of chloropigments of photosynthetic organisms to determine the corresponding δ 15 N values of biomass – and by extension, surface waters – the isotopic offset between chlorophyll and biomass must be constrained. Here we examine this offset in various geologically-relevant taxa, grown using nutrient sources that may approximate ocean conditions at different times in Earth’s history. Phytoplankton in this study include cyanobacteria (diazotrophic and non-diazotrophic), eukaryotic algae (red and green), and anoxygenic photosynthetic bacteria (Proteobacteria), as well as environmental samples from sulfidic lake water. Cultures were grown using N 2 , NO 3 − , and NH 4 + as nitrogen sources, and were examined under different light regimes and growth conditions. We find surprisingly high variability in the isotopic difference (δ 15 N biomass − δ 15 N chloropigment ) for prokaryotes, with average values for species ranging from −12.2‰ to +11.7‰. We define this difference as ε por , a term that encompasses diagenetic porphyrins and chlorins, as well as chlorophyll. Negative values of ε por reflect chloropigments that are 15 N-enriched relative to biomass. Notably, this enrichment appears to occur only in cyanobacteria. The average value of ε por for freshwater cyanobacterial species is −9.8 ± 1.8‰, while for marine cyanobacteria it is −0.9 ± 1.3‰. These isotopic effects group environmentally but not phylogenetically, e.g., ε por values for freshwater Chroococcales resemble those of freshwater Nostocales but differ from those of marine Chroococcales. Our measured values of ε por for eukaryotic algae (range = 4.7–8.7‰) are similar to previous reports for pure cultures. For all taxa studied, values of ε por do not depend on the type of nitrogen substrate used for growth. The observed environmental control of ε por suggests that values of ε por could be useful for determining the fractional burial of eukaryotic vs. cyanobacterial organic matter in the sedimentary record.

Geochimica et Cosmochimica Acta

A bacterium that can grow by using arsenic instead of phosphorus

Life is mostly composed of the elements carbon, hydrogen, nitrogen, oxygen, sulfur, and phosphorus. Although these six elements make up nucleic acids, proteins, and lipids and thus the bulk of living matter, it is theoretically possible that some other elements in the periodic table could serve the same functions. Here, we describe a bacterium, strain GFAJ-1 of the Halomonadaceae, isolated from Mono Lake, California, that is able to substitute arsenic for phosphorus to sustain its growth. Our data show evidence for arsenate in macromolecules that normally contain phosphate, most notably nucleic acids and proteins. Exchange of one of the major bio-elements may have profound evolutionary and geochemical importance.

Science

Response to comments on "A bacterium that can grow using arsenic instead of phosphorus"

Concerns have been raised about our recent study suggesting that arsenic (As) substitutes for phosphorus in major biomolecules of a bacterium that tolerates extreme As concentrations. We welcome the opportunity to better explain our methods and results and to consider alternative interpretations. We maintain that our interpretation of As substitution, based on multiple congruent lines of evidence, is viable.

Science

Arsenic in the evolution of earth and extraterrestrial ecosystems

If you were asked to speculate about the form extra-terrestrial life on Mars might take, which geomicrobial phenomenon might you select as a model system, assuming that life on Mars would be ‘primitive’? Give your reasons. At the end of my senior year at Rensselaer Polytechnic Institute in 1968, I took Professor Ehrlich's final for his Geomicrobiology course. The above question beckoned to me like the Sirens to Odysseus, for if I answered, it would take so much time and thought that I would never get around to the exam's other essay questions and consequently, would be “shipwrecked” by flunking the course. So, I passed it up. With this 41-year perspective in mind, this manuscript is now submitted to Professor Ehrlich for (belated) “extra-credit.” R.S. Oremland

Geomicrobiology Journal