Fei Mo | Geology Reports

USGS2024

Changes in microbial community and network structure precede shrub degradation in a desert ecosystem

Large-scale restoration is intended to promote ecological recovery. Improvements in plant and microbial conditions, however, may slow or even reverse in late succession. To better understand long-term restoration outcomes and underlying drivers of successional pathways, we tracked plant, bacterial and fungal, and soil conditions across a 40-year shrub plantation that was intended to stabilize desertified land in northern China. We found that planted Haloxylon ammodendron shrubs developed and then subsequently became degraded after 30–40 years. Bacterial abundance and α-diversity were much higher than those of fungi, but no significant differences in composition and structure were found in different plantation ages. In contrast, the dominant taxa of fungal communities shifted from symbiotroph and saprotroph species towards pathotroph species with increased soil nutrients in the plantation chronosequence after two decades. The changes in fungal dominant species led to a transition in microbial network structure and function, with an increase in negative linkages among taxa that began in the middle stages of succession. Changes in fungal community structure had direct and indirect negative effects on shrub leaf physiology, root activity, and biomass. Our results highlight the preceding role of a breakdown in soil microbial community composition and network structure on the degradation of shrub performance in long-term desert succession. Our study emphasizes the importance of understanding soil-microbial-plant linkages on restoration outcomes, and mechanisms that can slow or reverse the recovery of ecosystems.

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USGS2022

The biogeography of relative abundance of soil fungi versus bacteria in surface topsoil

Fungi and bacteria are the two dominant groups of soil microbial communities worldwide. By controlling the turnover of soil organic matter, these organisms directly regulate the exchange of carbon between the soil and the atmosphere. Fundamental differences in the physiology and life history of bacteria and fungi suggest that variation in the biogeography of soil fungal and bacterial relative abundance could drive striking differences in carbon decomposition and soil organic matter formation across different biomes. However, a lack of global and predictive information on the distribution of these organisms in terrestrial 45 ecosystems has prevented the inclusion of soil fungal and bacterial relative abundance and the associated processes into global biogeochemical models. Here, we used a global scale dataset in the top soil surface (>3000 distinct observations of soil fungal and bacterial abundance) to generate the first quantitative and spatially high resolution (1km) explicit map of soil fungal proportion, defined as fungi/fungi + bacteria, across terrestrial ecosystems. We reveal striking latitudinal trends where fungal dominance increases in cold and high latitude environments with large soil carbon stocks. There was strong non-linear response of fungal 50 dominance to environmental gradient, i.e., mean annual temperature (MAT) and net primary productivity (NPP). Fungi and bacteria dominated in regions with low and high MAT and NPP, respectively, thus representing slow vs. fast soil energy channels, a concept with a long history in soil ecology. These high-resolution models provide the first steps towards representing the major soil microbial groups and their functional differences in global biogeochemical models to improve predictions of soil organic matter turnover under current and future climate scenarios

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