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Ethan Smith

Publications and source records attributed to Ethan Smith.

4 recordsLinked to original sources

STREAMS guidelines: Standards for technical reporting in environmental and host-associated microbiome studies

The interdisciplinary nature of microbiome research, coupled with the generation of complex multi-omics data, makes knowledge sharing challenging. The Strengthening the Organization and Reporting of Microbiome Studies (STORMS) guidelines provide a checklist for the reporting of study information, experimental design and analytical methods within a scientific manuscript on human microbiome research. Here, in this Consensus Statement, we present the standards for technical reporting in environmental and host-associated microbiome studies (STREAMS) guidelines. The guidelines expand on STORMS and include 67 items to support the reporting and review of environmental (for example, terrestrial, aquatic, atmospheric and engineered), synthetic and non-human host-associated microbiome studies in a standardized and machine-actionable manner. Based on input from 248 researchers spanning 28 countries, we provide detailed guidance, including comparisons with STORMS, and case studies that demonstrate the usage of the STREAMS guidelines. STREAMS, like STORMS, will be a living community resource updated by the Consortium with consensus-building input of the broader community.

Nature Microbiology

Improving the usability of Galileo and Voyager images of Jupiter’s moon, Europa

NASA's Voyager 1, Voyager 2, and Galileo spacecraft acquired hundreds of images of Jupiter's moon Europa. These images provide the only moderate- to high-resolution views of the moon's surface and are therefore a critical resource for scientific analysis and future mission planning. Unfortunately, uncertain knowledge of the spacecraft's position and pointing during image acquisition resulted in significant errors in the location of the images on the surface. The result is that adjacent images are poorly aligned, with some images displaced by more than 100 km from their correct location. These errors severely degrade the usability of the Voyager and Galileo imaging data sets. To improve the usability of these data sets, we used the U.S. Geological Survey Integrated Software for Imagers and Spectrometers to build a nearly global image tie-point network with more than 50,000 tie points and 135,000 image measurements on 481 Galileo and 221 Voyager images. A global least-squares bundle adjustment of our final Europa tie-point network calculated latitude, longitude, and radius values for each point by minimizing residuals globally, and resulted in root mean square (RMS) uncertainties of 246.6 m, 307.0 m, and 70.5 m in latitude, longitude, and radius, respectively. The total RMS uncertainty was 0.32 pixels. This work enables direct use of nearly the entire Galileo and Voyager image data sets for Europa. We are providing the community with updated NASA Navigation and Ancillary Information Facility Spacecraft, Planet, Instrument, C-matrix (pointing), and Events kernels, mosaics of Galileo images acquired during each observation sequence, and individual processed and projected level 2 images.

Earth and Space Science

Evaluating stereo DTM quality at Jezero Crater, Mars with HRSC, CTX, and HiRISE images

We have used a high-precision, high-resolution digital terrain model (DTM) of the NASA Mars 2020 rover Perseverance landing site in Jezero crater based on mosaicked images from the Mars Reconnaissance Orbiter High Resolution Imaging Science Experiment (MRO HiRISE) camera as a reference dataset to evaluate DTMs based on Mars Express High Resolution Stereo Camera (MEX HRSC) and MRO Context camera (CTX) images. Results are consistent with our earlier HRSC-HiRISE comparisons at the Mars Science Laboratory (MSL) Curiosity landing site in Gale crater, confirming that those results were not compromised by the small area compared and potential problems with spatial registration. Specifically, height errors are on the order of half a pixel and correspond to an image matching error of 0.2–0.3 pixel but estimates of horizontal resolution are 10–20 pixels. Products from the HRSC team pipeline at DLR are smoother but more precise vertically than those produced by using the commercial stereo package SOCET SET®. The DLR products are also homogenous in quality, whereas the SOCET products are less smoothed and have higher errors in rougher terrain. Despite this weak variation, our results are consistent with a rule of thumb of 0.2–0.3 pixel matching precision based on many prior studies. Horizontal resolution is significantly coarser than the DTM ground sample distance (GSD), which is typically 3–5 pixels.

Conference Paper

Revisiting the Apollo photogrammetric mapping system

The integrated photogrammetric mapping system flown on the last three Apollo lunar missions (15, 16, and 17) in 1971 and 1972 incorporated a Metric (mapping) Camera, a high-resolution Panoramic Camera, and a star camera and laser altimeter to provide support data. The U.S. Geological Survey’s Astrogeology Science Center, the Intelligent Robotics Group of the NASA Ames Research Center, and Arizona State University are working together in an ongoing collaboration to achieve the most complete cartographic development of Apollo mapping system data into versatile digital map products. These will enable a variety of scientific/engineering uses of the data including mission planning, geologic mapping, geophysical process modelling, slope dependent correction of spectral data, and change detection. After a brief discussion of the origins of the mapping system, we describe the Metric and Panoramic cameras, processing of the associated image and support data, work to photogrammetrically control the Metric Camera images, and future plans.

Conference Paper