Geology topics

Deanna H. Olson

Publications and source records attributed to Deanna H. Olson.

24 records · Page 2Linked to original sources

USGS2016

Salamander chytrid fungus ( Batrachochytrium salamandrivorans ) in the United States—Developing research, monitoring, and management strategies

The recently (2013) identified pathogenic chytrid fungus, Batrachochytrium salamandrivoran s ( Bsal ), poses a severe threat to the distribution and abundance of salamanders within the United States and Europe. Development of a response strategy for the potential, and likely, invasion of Bsal into the United States is crucial to protect global salamander biodiversity. A formal working group, led by Amphibian Research and Monitoring Initiative (ARMI) scientists from the U.S. Geological Survey (USGS) Patuxent Wildlife Research Center, Fort Collins Science Center, and Forest and Rangeland Ecosystem Science Center, was held at the USGS Powell Center for Analysis and Synthesis in Fort Collins, Colorado, United States from June 23 to June 25, 2015, to identify crucial Bsal research and monitoring needs that could inform conservation and management strategies for salamanders in the United States. Key findings of the workshop included the following: (1) the introduction of Bsal into the United States is highly probable, if not inevitable, thus requiring development of immediate short-term and long-term intervention strategies to prevent Bsal establishment and biodiversity decline; (2) management actions targeted towards pathogen containment may be ineffective in reducing the long-term spread of Bsal throughout the United States; and (3) early detection of Bsal through surveillance at key amphibian import locations, among high-risk wild populations, and through analysis of archived samples is necessary for developing management responses. Top research priorities during the preinvasion stage included the following: (1) deployment of qualified diagnostic methods for Bsal and establishment of standardized laboratory practices, (2) assessment of susceptibility for amphibian hosts (including anurans), and (3) development and evaluation of short- and long-term pathogen intervention and management strategies. Several outcomes were achieved during the workshop, including development of an organizational structure with working groups for a Bsal Task Force, creation of an initial influence diagram to aid in identifying effective management actions in the face of uncertainty, and production of a list of potential management actions and key research uncertainties. Additional products under development include a Bsal Strategic Action plan, an emergency response plan, a monitoring and surveillance program, a standardized diagnostic approach, decision models for natural resource agencies, and a reporting database for salamander mortalities. This workshop was the first international meeting to address the threat of Bsal to salamander populations in the United States, with more than 30 participants from U.S. conservation and resource management agencies (U.S. Fish and Wildlife Service, U.S. Forest Service, U.S. Department of Defense, U.S. National Park Service, and Association of Fish and Wildlife Agencies) and academic research institutions in Australia, the Netherlands, Switzerland, the United Kingdom, and the United States.

Open-File Report↗

USGS2014

Heterogeneous occupancy and density estimates of the pathogenic fungus Batrachochytrium dendrobatidis in waters of North America

Biodiversity losses are occurring worldwide due to a combination of stressors. For example, by one estimate, 40% of amphibian species are vulnerable to extinction, and disease is one threat to amphibian populations. The emerging infectious disease chytridiomycosis, caused by the aquatic fungus Batrachochytrium dendrobatidis ( Bd ), is a contributor to amphibian declines worldwide. Bd research has focused on the dynamics of the pathogen in its amphibian hosts, with little emphasis on investigating the dynamics of free-living Bd . Therefore, we investigated patterns of Bd occupancy and density in amphibian habitats using occupancy models, powerful tools for estimating site occupancy and detection probability. Occupancy models have been used to investigate diseases where the focus was on pathogen occurrence in the host. We applied occupancy models to investigate free-living Bd in North American surface waters to determine Bd seasonality, relationships between Bd site occupancy and habitat attributes, and probability of detection from water samples as a function of the number of samples, sample volume, and water quality. We also report on the temporal patterns of Bd density from a 4-year case study of a Bd -positive wetland. We provide evidence that Bd occurs in the environment year-round. Bd exhibited temporal and spatial heterogeneity in density, but did not exhibit seasonality in occupancy. Bd was detected in all months, typically at less than 100 zoospores L −1 . The highest density observed was ∼3 million zoospores L −1 . We detected Bd in 47% of sites sampled, but estimated that Bd occupied 61% of sites, highlighting the importance of accounting for imperfect detection. When Bd was present, there was a 95% chance of detecting it with four samples of 600 ml of water or five samples of 60 mL. Our findings provide important baseline information to advance the study of Bd disease ecology, and advance our understanding of amphibian exposure to free-living Bd in aquatic habitats over time.

California, Colorado, Idaho, Maine, Minnesota, Nev↗

USGS2014

Detection of the emerging amphibian pathogens Batrachochytrium dendrobatidis and ranavirus in Russia

In a population of the European common toad Bufo bufo from a rural pond in the region of Lake Glubokoe Regional Reserve in Moscow province, Russia, unexplained mass mortality events involving larvae and metamorphs have been observed over a monitoring period of >20 yr. We tested toads from this and a nearby site for the emerging amphibian pathogens Batrachochytrium dendrobatidis ( Bd ) and ranavirus (Rv). Both pathogens were detected, and at the rural pond site, with the above-noted losses and decline in toad breeding success, 40% of B. bufo metamorphs were Bd positive, 46% were Rv positive and 20% were co-infected with both pathogens. Toad metamorphs from a neighbouring water body were also Bd and Rv positive (25 and 55%, respectively). This is the first confirmation of these pathogens in Russia. Questions remain as to the origins of these pathogens in Russia and their roles in documented mass mortality events.

Lake Glubokoe Regional Reserve↗

USGS2014

Trouble in the aquatic world: How wildlife professionals are battling amphibian declines

A parasitic fungus, similar to the one that caused the extinction of numerous tropical frog and toad species, is killing salamanders in Europe. Scientists first identified the fungus, Batrachochytrium salamandrivorans, in 2013 as the culprit behind the death of fire salamanders ( Salamandr a salamandra ) in the Netherlands ( Martel et al. 2013 ) and are now exploring its potential impact to other species. Although the fungus, which kills the amphibians by infecting their skin, has not yet spread to the United States, researchers believe it’s only a matter of time before it does and, when that happens, the impact on salamander populations could be devastating ( Martel et al. 2014 ). Reports of worldwide declines of amphibians began a quarter of a century ago ( Blaustein & Wake 1990 ). Globally, some amphibian population declines occurred in the late 1950s and early 1960s, and declining trends continued in North America ( Houlahan et al. 2000 ). In the earlier years, population declines were attributed primarily to overharvest due to unregulated supply of species such as the northern leopard frog ( Lithobate s pipiens ) for educational use ( Dodd 2013 ). In later years, however, causes of declines were less evident. In 1989, herpetologists at the First World Congress of Herpetology traded alarming stories of losses across continents and in seemingly protected landscapes, making it clear that amphibian population declines were a “global phenomenon.” In response to these reports, in 1991, the International Union for Conservation of Nature (IUCN) established the Declining Amphibian Populations Task Force to better understand the scale and scope of global amphibian declines. Unfortunately, the absence of long-term monitoring data and targeted studies made it difficult for the task force to compile information. Today, according to AmphibiaWeb.org, there are 7,342 amphibian species in the world — double the number since the first alerts of declines — making the situation appear deceptively less dire. In fact, our understanding of genetic diversity significantly raises the stakes, and we are at risk of losing far more species than we believed only a few years ago. According to the IUCN, amphibians now lead the list of vertebrate taxa affected by the larger “biodiversity crisis” and sixth major mass- extinction event on Earth ( Keith et al. 2014 , Wake and Vredenburg 2008 ).

The Wildlife Professional↗

USGS2006

BLM Density Management and Riparian Buffer Study: Establishment Report and Study Plan

The Bureau of Land Management (BLM), Pacific Northwest Research Station (PNW), U.S. Geological Survey (USGS), and Oregon State University (OSU) established the BLM Density Management and Riparian Buffer Study (DMS) in 1994 to demonstrate and test options for young stand management to meet Northwest Forest Plan objectives in western Oregon. The primary objectives of the DMS are to evaluate the effects of alternative forest density management treatments in young stands on the development of important late-successional forest habitat attributes and to assess the combined effects of density management and alternative riparian buffer widths on aquatic and riparian ecosystems. The DMS consists of three integrated studies: initial thinning, rethinning, and riparian buffer widths. The initial thinning study was installed in 50- to 80-year-old stands that had never been commercially thinned. Four stand treatments of 30-60 acres each were established at each of seven study sites: (1) unthinned control, (2) high density retention [120 trees per acre (TPA)], (3) moderate density retention (80 TPA), and (4) variable density retention (40-120 TPA). Small (1/4 to 1 acre in size) leave islands were included in all treatments except the control, and small patch cuts (1/4 to 1 acre in size) were included in the moderate and variable density treatments. An eighth site, Callahan Creek, contains a partial implementation of the study design. The rethinning study was installed in four 70- to 90-year-old stands that previously had been commercially thinned. Each study stand was split into two parts: one part as an untreated control and the other part as a rethinning (30-60 TPA). The riparian buffer study was nested within the moderate density retention treatment at each of the eight initial thinning study sites and two rethinning sites. Alternative riparian buffer widths included: (1) streamside retention (one tree canopy width, or 20-25 feet), (2) variable width (follows topographic and vegetative breaks, 50 feet slope distance minimum), (3) one full site-potential tree height (approximately 220 feet), and (4) two full tree heights (approximately 440 feet). A second round of density management manipulations are now being planned for implementation beginning in 2009. Stem density will be reduced in the high, moderate, and variable density treatments and most existing riparian buffers, leave islands, and patch cuts will remain in place. Remeasurement, data management, and analysis are ongoing for three long-term, core components of the DMS: vegetation, microclimate, and aquatic vertebrates. In addition, several short-term collaborative studies have been completed on these sites, including leave island effectiveness as refugia, treatment response of terrestrial and aquatic arthropods, and smaller-scale studies of fungal, lichen, and bryophyte community response. Additional collaborative studies are encouraged on DMS sites.

Scientific Investigations Report↗

USGS1999

DNA repair and resistance to UV-B radiation in western spotted frogs

We assessed DNA repair and resistance to solar radiation in eggs of members of the western spotted frog complex ( Rana pretiosa and R. luteiventris ), species whose populations are suffering severe range reductions and declines. Specifically, we measured the activity of photoreactivating enzyme (photolyase) in oocytes of spotted frogs. In some species, photoreactivation is the most important mechanism for repair of UV-damaged DNA. Using field experiments, we also compared the hatching success of spotted frog embryos at natural oviposition sites at three elevations, where some embryos were subjected to ambient levels of UV-B radiation and others were shielded from UV-B radiation. Compared with other amphibians, photolyase activities in spotted frogs were relatively high. At all sites, hatching success was unaffected by UV-B. Our data support the interpretation that amphibian embryos with relatively high levels of photolyase are more resistant to UV-B radiation than those with lower levels of photolyase. At the embryonic stage, UV-B radiation does not presently seem to be contributing to the population declines of spotted frogs.

Ecological Applications↗