Geology topics

Christopher G. Smith

Publications and source records attributed to Christopher G. Smith.

At least 19 recordsLinked to original sources

USGS2026

Towards a refined definition of “tidal influence” for the coastal wetland sciences

The astronomical tide relates to lunar (and to a lesser extent solar) influences on rising and falling water bodies, and is a key control of many coastal processes. However, tides manifest along coastal margins in different ways to muddle application beyond Sir Isaac Newton’s first descriptions. Here, we argue that tide, or specifically “tidal,” has not been adequately defined for the coastal wetland sciences to facilitate contemporary interdisciplinary distinction for rapidly changing coastlines and future climate adaptation planning. We provide a brief history of the tidal concept, and we describe tides in a diversity of uncommonly recognized marginal coastal environments. Common astronomical tide manifestations are described through hydrographic examples, then expanded to include those tidal environments exposed additionally to fluvial, meteorological (wind), or groundwater influences. Our expanded definition of “tidal” is intended to be a forward-looking construct as environments will inevitably change with sea-level rise, water extraction, and anthropogenic flow alteration. Our definition of wetland tidal influence, which we broaden, includes those “wetlands affected by astronomic water level fluctuations within coastally restricted environments causing frequent or infrequent surface inundation or groundwater tidal variation that affects the biogeochemistry of the soil (e.g., ion exchange capacity, oxygen state, mineralization processes)”. Astronomic water level fluctuations are often amplified or dampened by non-astronomical events, such as wind. Expanding the definition of what is considered tidal by the scientific community is critical for improved understanding of coastal wetland function and the suite of ecosystem services they provide people and society, including climate mitigation opportunity, management, and adaptation.

Wetlands↗

USGS2025

Evaluating the influence of constructed subtidal reefs on marsh shoreline erosion, sediment deposition, and wave energy

Salt marshes play a critical role in providing economic and ecological benefits but are susceptible to shoreline erosion. Natural and nature-based features (NNBF), such as breakwater reefs, are often used to reduce shoreline exposure to wave action and provide biogenic benefits. However, waves and water level are also responsible for the sediment supply necessary for marsh accretion, a critical component of marsh resilience to sea level rise. The goal of this study was to evaluate the effects of two subtidal breakwater reefs on wave energy, marsh shoreline erosion, and sediment deposition onto the marsh platform. As a restoration intervention, oyster shell and limestone gravel reefs were constructed within the nearshore zone of a high-energy shoreline where active shoreline erosion is causing marsh habitat loss. Although both sediment deposition and shoreline erosion were reduced after reef installation at all sites, the reefs demonstrated a statistically significant reduction in sediment deposition, whereas its effect on decreasing shoreline erosion was less pronounced. This variability in erosion reduction may be partly influenced by the physical dimensions of the reefs, affecting wave attenuation and leeward circulation. Wave measurements indicate that the reef reduced wave energy, particularly during south and southeast winds that could lead to the largest onshore waves. Given that these strong onshore winds are seasonal, extending the duration of data collection could provide deeper insights into the reef's influence on marsh shoreline erosion. This study is novel in that there are limited experimental or observational studies quantifying the wave reduction capacity and effects of subtidal reefs on marsh shoreline erosion and sediment dynamics. Studies such as these are critical to evaluate the capacity of subtidal reefs to protect marsh shorelines from erosion, but also to measure their impact on accretion processes necessary for the marsh to maintain elevation under future sea level rise.

Mississippi↗

USGS2025

Predictive regressive models of recent marsh sediment thickness improve the quantification of coastal marsh sediment budgets

Coastal marsh wetlands experience variations in vertical gains and losses through time, which have allowed them to infill relict topography and record variations in drivers. The stratigraphic unit associated with the development of the marsh also reflects the long-term importance of key ecosystem services supplied by the marsh environment, including carbon storage and storm mitigation. Mapping these coastal wetland sediments and the marsh unit thickness is challenging as traditional coastal geophysical tools are not easily deployable (acoustic methods) or are unreliable in saline-soil environments (e.g., ground-penetrating radar), leaving core-based methods the most viable mapping method. In the present study, we utilized prior information on the geologic architecture of the region to select spatial and physical metrics that likely persisted throughout evolution of the marsh during the late Holocene. We then assessed the individual and collective power of these metrics to predict marsh thickness observed from cores. Employing regressive predictive models powered by these data, we improve the quantification of marsh thickness for a coastal fringing marsh within the Grand Bay estuary in Mississippi and Alabama (USA). The information gained from this approach yields improved estimates of the carbon stocks in this environment. Additionally, the stored sediment masses reflect the past, and potential future, persistence of the Grand Bay marsh under historical and present marsh-estuarine sediment exchange fluxes. Such improvements to both the sediment budget of recent marsh stratigraphic units and the spatial extent provide new resources for comparison with large-scale landscape models, the latter of which may be used, when validated, to predict future change and ecosystem transformations.

Alabama. Mississippi↗

USGS2025

Shifts in marsh erosion, migration, and wave exposure over nearly two centuries of sea-level rise in the Gulf of Mexico

Coastal wetlands are economically important ecosystems, but are at risk to erosion from waves, storms, and sea level rise. However, marshes can persist under rising sea level through vertical accretion and migration into adjacent higher-elevation habitats. We measured rates of marsh shoreline change and migration and compared the results for historical and modern periods in a largely undeveloped and marine-dominated estuary within the Mississippi-Alabama coast of the Northern Gulf of Mexico. Mean shoreline change rate for the modern (post-1957) period was higher than historical rates (pre-1957) at −1.55 ± 0.11 m yr −1 and -0.84 ± 0.07 m yr −1 , respectively. Shoreline change rates were highest in regions where exposure to wind-driven waves increased due to barrier island migration and land loss. Marsh migration (modern 1.25 ± 0.37 m yr −1 and historical 1.01 ± 0.13 m yr −1 ) occurred at similar rates as shoreline erosion except for the highest erosive shorelines, leading to an overall 15% marsh loss. Upland-to-marsh conversion occurred in forested areas and may have been encouraged by changes in management practices. In the Grand Bay estuary, our data show that marsh migration is not occurring at sufficient rates to compensate for marsh loss, resulting in overall loss in marsh habitat. Overall, migration may allow marsh to persist under rising sea levels but can lead to an overall reduction in forested or freshwater habitats if steep slopes or other barriers prevent their migration.

Alabama, Mississippi↗

USGS2024

Model sensitivity analysis for coastal morphodynamics: Investigating sediment parameters and bed composition in Delft3D

Numerical simulation of sediment transport and subsequent morphological evolution rely on accurate parameterizations of sediment characteristics. However, these data are often not available or are spatially and/or temporally limited. This study approaches the problem of limited sediment grain-size data with a series of simulations assessing model sensitivity to sediment parameters and initial bed composition configurations in Delft3D, leading to improved modeling practices. A previously validated Delft3D sediment transport and morphology model for Dauphin Island, Alabama, USA, is used as the benchmark case. A method for the generation of representative sediment grain sizes and their spatially varying distributions is presented via end-member analysis of in situ surficial sediment samples. Derived sediment classes and their spatial distributions are applied to two sensitivity case simulations with increasing bed composition complexity. First, multiple sediment classes are applied in a single fully mixed layer, regardless of sediment type. Second, multiple sediment classes are applied in a thin, fully mixed transport layer with underlayers containing only the non-cohesive sediment classes below. Simulations were carried out in a probabilistic, Delft3D MorMerge configuration to capture long-term morphology change for 10 years. We found there is sensitivity to the inclusion of additional sediment classes and sediment distribution made evident in bed level and morphology change. Inclusion of highly mobile fine sediments altered model results in each sensitivity case. The model was also found to be sensitive to initial bed composition in terms of bed level and morphology change, with notable differences between sensitivity cases on decadal timescales, indicating an armoring effect in the second sensitivity case, which used the transport and underlayer bed configuration. The results of this study offer guidance for numerical modelers concerned with sediment behavior in coastal and estuarine environments.

Alabama↗

USGS2024

Identifying and constraining marsh-type transitions in response to increasing erosion over the past century

Marsh environments, characterized by their flora and fauna, change laterally in response to shoreline erosion, water levels and inundation, and anthropogenic activities. The Grand Bay coastal system (USA) has undergone multiple large-scale geomorphic and hydrologic changes resulting in altered sediment supply, depositional patterns, and degraded barrier islands, leaving wetland salt marshes vulnerable to increased wave activity. Two shore-perpendicular transect sites, one along a low-activity shoreline and the other in a high activity area of the same bay-marsh complex, were sampled to investigate how the marshes within 50 m of the modern shoreline have responded to different levels of increased wave activity over the past century. Surface sediments graded finer and more organic with increased distance from the shoreline while cores generally exhibited a coarsening upwards grain-size trend; all cores contained multiple large sedimentological shifts. 210 Pb-based mass accumulation rates over the last two decades were greater than the long-term (centurial) average at each site with the fastest accumulation rates of 7.81 ± 1.58 and 7.79 ± 1.63 kg/m 2 /year at the sites nearest the shoreline. A shoreline change analysis of three time-slices (1848–2017, 1957–2017, 2016–2017) shows increased erosion at both sites since 1848 with modern rates of −0.95 and −0.88 m/year. Downcore sedimentology, mass accumulation rates, and shoreline change rates paired with foraminiferal biofacies and identification of local estuarine indicator species, Paratrochammina simplissima , aided in identifying paleo marsh types, their relative proximity to the shoreline, and sediment provenance. The high-energy marsh site transitioned from middle marsh to low marsh in the 1960s, and the low-energy marsh site transitioned later, at the end of the twentieth and early twenty-first century, due to its more protected location. Marsh type transition corresponds chronologically with the coarsening upwards grain-size trend observed and the degradation of Grand Batture Island; since its submergence, signatures of multiple storm event have been preserved downcore.

Mississippi↗

USGS2023

Modeling the effects of interior headland restoration on estuarine sediment transport processes in a marine-dominant estuary

The effects of interior headland restoration on estuarine sediment transport processes were assessed through process-based numerical modeling. Three proposed interior headland restoration scenarios in the Grand Bay estuary (Mississippi/Alabama) were modeled using Delft3D to understand impacts on suspended sediment concentrations, bed level morphology, and sediment fluxes under present-day conditions and a sea level rise (SLR) of 0.5 m, representing a high projection of SLR by the year 2050. Model results showed localized differences in bed levels near the restored features after a year of simulated morphologic change. The restored headland features acted as a sediment source to the immediate surroundings while also providing some non-significant sheltering effect of backshore shoals and marsh shorelines. Sediment fluxes were sensitive to wind directions and the presence of the restored headlands. However, regardless of wind direction, mean sea level, or restoration action, the greatest sediment fluxes were always export fluxes from the estuary, which were further increased with increased sea level. Suspended sediment concentrations were highly influenced by SLR in a non-linear manner. Sediment concentrations both increased and decreased depending on depth under SLR. Furthermore, SLR allowed for the suspension and deposition of sediments on the marsh platform. Overall, the influence of SLR was more impactful to changing sediment dynamics than the influence of the restoration features.

Alabama↗

USGS2023

Source contributions to suspended sediment and particulate selenium export from the Loutsenhizer Arroyo and Sunflower Drain watersheds in Colorado

Selenium in aquatic ecosystems of the lower Gunnison River Basin in Colorado is affecting the recovery of populations of endangered, native fish species. Dietary exposure is the primary pathway for bioaccumulation of selenium in fish, and particulate selenium can be consumed directly by fish or by the invertebrates on which fish feed. Although selenium can be incorporated into particulate matter via biogeochemical processes, particulate selenium can also enter aquatic ecosystems of the lower Gunnison River Basin from sediments derived from the selenium-rich Mancos Shale. The U.S. Geological Survey, in cooperation with the Colorado Water Conservation Board, conducted this study during 2018–19 to identify sources of selenium-rich suspended sediments from two watersheds underlain by Mancos Shale: Loutsenhizer Arroyo and Sunflower Drain, which is a locally known agricultural drainage near the municipality of Delta, Colorado. A multipronged approach (fieldwork, laboratory work, and computer modeling) referred to as “sediment fingerprinting” was used to evaluate sources of suspended sediments in the streams flowing out of the two studied watersheds. Four potential source types for suspended sediments were identified and sampled (using soil plugs) within the watersheds: rangelands, agricultural fields, arroyo walls, and streambanks. The sediment fingerprinting approach used elemental concentrations and naturally occurring fallout radionuclides as tracers to apportion percent contributions from the four source types of suspended sediments found in streamflow from both watersheds. To determine the dominant sources of suspended sediment in streamflow from both watersheds, a mathematical “unmixing” model was used. Unmixing models apportion source percentages to samples of material in which those sources are mixed. These models used elemental and isotopic data in the suspended sediments to unmix them into proportional contributions from source types. The results indicated that arroyo walls and streambanks generally dominated as sources of the suspended sediment. Arroyo walls and streambanks were channel-adjacent sources, with sediments mobilized by water flowing within the stream channel. These sources accounted for greater than 50 percent of suspended sediment in all but one sample and accounted for 100 percent of suspended sediment in 5 of the 11 samples collected. Rangeland and agricultural field sources were located in uplands outside of stream channels and were detected more often during the non-irrigation season. Rangeland and agricultural field sources each were found in 5 of the 11 samples collected. Concentrations of selenium in sediment-source samples were comparatively greater in streambanks and lower in rangelands, with agricultural fields and arroyo walls being intermediate. As a result, source apportionments for particulate selenium skewed towards sources adjacent to stream channels more than for suspended sediments. Water imports for irrigation have changed the hydrology of the watersheds, and a notable fraction of imported water passes through the watersheds rapidly. The rapid flowthrough water during the irrigation season likely contributes heavily to sediment erosion and transport in Loutsenhizer Arroyo and Sunflower Drain, particularly from channel-adjacent sources of sediment. Decreases in irrigation season streamflow, at least in Loutsenhizer Arroyo, may have decreased sediment erosion and transport during the 2018–20 irrigation seasons compared to the 2015–17 seasons.

Colorado↗

USGS2023

Mode and provenance of sediment deposition on a transgressive marsh

In this study, we use foraminifera as environmental indicators to aid in computing the historical volumetric inputs of estuarine sediments to adjacent marsh. These data can help assess the importance of estuarine sediment inputs to marsh accretion. The Grand Bay system (GBS), located on the southern coast of Alabama and Mississippi, has been described as a “self-cannibalizing bay-marsh complex” due to the disproportionately large amount of suspended sediment exported from the GBS relative to the amount of sediment imported into tidal channels and available to the marsh. Despite this sediment limitation in the marshes, mass sediment budgets along shoreline-proximal marsh sites suggest depositional fluxes on the marsh are nearly equivalent to erosional losses at decadal scales. Geochronologies and foraminiferal census data for two shore-normal transects show that estuarine sediment contributes significant portions (28-65%) of this depositional flux. Contrast in shoreline morphology (i.e., orientation, irregularity, and exposure) and adjacent environments (i.e., tidal creeks and mud flats) may influence the proportion of estuarine sediment delivered to marsh. Improvements of sediment provenance tracers in these environments will continually improve the understanding of sediment reworking and transport in transgressive marsh-estuarine systems such as GBS and the role they play in marsh resiliency to sea-level change.

Alabama, Mississippi↗

USGS2022

Reconciling models and measurements of marsh vulnerability to sea level rise

Tidal marsh survival in the face of sea level rise (SLR) and declining sediment supply often depends on the ability of marshes to build soil vertically. However, numerical models typically predict survival under rates of SLR that far exceed field-based measurements of vertical accretion. Here, we combine novel measurements from seven U.S. Atlantic Coast marshes and data from 70 additional marshes from around the world to illustrate that—over continental scales—70% of variability in marsh accretion rates can be explained by suspended sediment concentratin (SSC) and spring tidal range (TR). Apparent discrepancies between models and measurements can be explained by differing responses in high marshes and low marshes, the latter of which accretes faster for a given SSC and TR. Together these results help bridge the gap between models and measurements, and reinforce the paradigm that sediment supply is the key determinant of wetland vulnerability at continental scales.

Limnology and Oceanography Letters↗

USGS2021

Impacts of sediment removal from and placement in coastal barrier island systems

Executive Summary On June 24, 2019, Congressman Raul Grijalva of Arizona, Chair of the House Committee on Natural Resources, sent a letter to the directors of the U.S. Fish and Wildlife Service and the U.S. Geological Survey to request their assistance in answering questions regarding coastal sediment resource management within the Coastal Barrier Resources System as defined by the Coastal Barrier Resources Act (Public Law 97–348; 96 Stat. 1653; 16 U.S.C. 3501 et seq.). For the purposes of this response, coastal sediment resource management refers to the removal of sediment from one part of a barrier island system for placement in another part of the coastal system, for either hazard mitigation (for example, erosion or flood control) or coastal restoration (for example, expansion or restoration of beach, dune, and [or] marsh habitats). The specific topics of concern are as follows (paraphrased from Congressman Grijalva’s letter): 1. Disruption of coastal sediment supply resulting from sediment removal and placement, including the replenishment rate of removed sediments and impacts to other components of the barrier island system (discussed in sec. 3). 2. Physical and biological impacts of sediment removal and placement on benthic habitats (discussed in sec. 4). 3. Impacts of sediment removal and placement on fish and other marine species (discussed in sec. 5). 4. Changes in migratory bird nesting and foraging habitats resulting from sediment removal and placement (discussed in sec. 6). 5. Long-term impacts of sediment removal and placement on physical coastal resiliency (discussed in sec. 7).

Open-File Report↗

USGS2021

Gulf of Mexico blue hole harbors high levels of novel microbial lineages

Exploration of oxygen-depleted marine environments has consistently revealed novel microbial taxa and metabolic capabilities that expand our understanding of microbial evolution and ecology. Marine blue holes are shallow karst formations characterized by low oxygen and high organic matter content. They are logistically challenging to sample, and thus our understanding of their biogeochemistry and microbial ecology is limited. We present a metagenomic and geochemical characterization of Amberjack Hole on the Florida continental shelf (Gulf of Mexico). Dissolved oxygen became depleted at the hole’s rim (32 m water depth), remained low but detectable in an intermediate hypoxic zone (40–75 m), and then increased to a secondary peak before falling below detection in the bottom layer (80–110 m), concomitant with increases in nutrients, dissolved iron, and a series of sequentially more reduced sulfur species. Microbial communities in the bottom layer contained heretofore undocumented levels of the recently discovered phylum Woesearchaeota (up to 58% of the community), along with lineages in the bacterial Candidate Phyla Radiation (CPR). Thirty-one high-quality metagenome-assembled genomes (MAGs) showed extensive biochemical capabilities for sulfur and nitrogen cycling, as well as for resisting and respiring arsenic. One uncharacterized gene associated with a CPR lineage differentiated hypoxic from anoxic zone communities. Overall, microbial communities and geochemical profiles were stable across two sampling dates in the spring and fall of 2019. The blue hole habitat is a natural marine laboratory that provides opportunities for sampling taxa with under-characterized but potentially important roles in redox-stratified microbial processes.

Interational Society of Microbial Ecology (ISME) J↗

USGS2021

Emerging dominance of Paratrochammina simplissima (Cushman and McCulloch) in the northern Gulf of Mexico following hydrologic and geomorphic changes

Grand Bay estuary in coastal Mississippi and Alabama (USA) has undergone significant geomorphic changes over the last few centuries as a result of anthropogenic (bridge, road, and hardened shoreline construction) and climatic (extreme storm events) processes, which reduce freshwater input, sediment supply, and degrade barrier islands. To investigate how geomorphic changes may have altered the Grand Bay estuary, sediment push cores were collected for foraminiferal, sedimentological (organic matter content, grain-size distribution), and radiochemical ( 210 Pb, 137 Cs, and 7 Be) analyses. Clay normalized geochronologies were determined with a constant rate of supply model. Based on downcore age-depth relationships, select intervals were analyzed for foraminifera in order to assess alterations in the microfossil assemblage in Grand Bay estuary over the 20th Century. All estuarine samples were low diversity (species richness: 1–10; Fisher's alpha diversity: 0.14–1.75); two species, Ammotium salsum and Paratrochammina simplissima, dominated all downcore assemblages. Paratrochammina simplissima increased in abundance up-core from a minor subsidiary species (median = 4.7% at 19–20 cm) to dominant or co-dominant with A. salsum over the 20th and early 21st Centuries in six cores, comprising up to 60.7% of a single sample. The emerging dominance of P. simplissima since ~1950 along with the reduction of brackish-estuarine taxa and introduction of calcareous species signifies increased salinity and less marsh organic matter preserved in the sediments. While seasonal dissolution limits our ability to chronologically constrain the introduction of calcareous species, P. simplissima , a species not referenced in taxonomic data from the northern Gulf of Mexico until 2012, is well constrained, following its first occurrence in the 1930s.

Mississippi↗

USGS2021

Lateral shoreline erosion and shore-proximal sediment deposition on a coastal marsh from seasonal, storm and decadal measurements

The persistence of coastal marsh is dependent on its ability to maintain elevation relative to sea level, particularly for marshes experiencing high rates of shoreline erosion due to wave-attack, storms, and sea level rise. Sediments eroded at the marsh edge are either delivered onto the marsh platform or into the estuary, the latter resulting in a net loss of marsh sediments and soil carbon. Knowledge on the timing, pattern, and quantity of sediment deposition versus shoreline erosion along the marsh-estuary interface is critical for evaluating the overall health and vulnerability of coastal marshes to future scenarios of sea level rise and for estimating sediment budgets . Here we examined marsh shoreline erosion and sediment deposition for marsh sites experiencing a range of shoreline erosion rates and different levels of wind-wave exposure within the Grand Bay National Estuarine Research Reserve and Wildlife Refuge in Mississippi. We developed a method for calculating an erosion-deposition sediment budget using marsh elevation profiles, shoreline erosion rate, and sediment deposition measurements. Sediment budgets were calculated at four sites with varying shoreline erosion rates. Much of the sediment eroded at the marsh edge can be accounted for as marsh platform deposition, except at the most erosive site, suggesting a possible erosion threshold where eroded sediment mass is greater than platform deposition. Consistent with other studies of marsh creeks, sediment delivery to the marsh platform appears to be largely driven by wave climate. These data suggest that for erosive bay-estuarine shorelines, sediment delivered into the marsh is largely concentrated near the marsh shoreline, although shoreline erosion does not always result in a net loss of sediments from the marsh system in either decadal or annual assessments.

Mississippi↗

USGS2020

Using multiple environmental proxies and hydrodynamic modeling to investigate Late Holocene climate and coastal change within a large Gulf of Mexico estuarine system (Mobile Bay, Alabama, USA)

A high degree of uncertainty exists for understanding and predicting coastal estuarine response to changing climate, land-use, and sea-level conditions, leaving geologic records as a best-proxy for constraining potential outcomes. With the majority of the world's population focused in coastal regions, understanding how local systems respond to global, regional, and even local pressures is key in developing mitigation, adaptation, and management plans. The geomorphology of Mobile Bay in southeast Alabama (USA) has evolved considerably (e.g., bayhead delta back-stepping) over the late Holocene in response to global and regional sea-level and climate change. Smaller-scale geomorphic changes (e.g., spit and beach ridge development) have also had a significant influence on the evolution of the estuary. Organic matter characteristics, inorganic sediment geochemistry, benthic microfossils, and pollen in a ~ 3500 cal yr BP sediment sequence recovered in a gravity core (20GC) from Bon Secour Bay, a small sub-bay in the southeast corner of Mobile Bay, record time-varying marine influence. Increases in marine influence during ~3500 to 2300 cal yr BP and 1930 to 1160 cal yr BP are defined as zones with high-density and pre-dominantly calcareous foraminiferal species, abundant sand (>10%) and more marine-like geochemical signatures, which contrast the low-density and pre-dominantly agglutinated foraminiferal and more terrestrially influenced estuarine muds observed in other intervals of the sedimentary record (2300–1930 and 1160–400 cal yr BP) and the modern bay. Hydrodynamic models constrained by geomorphic boundary conditions for the time ~ 3500 cal yr BP, consistent with the most prominent marine-influenced sediment, provide insight to potential coastal configuration that might have permitted such marine water intrusion into the bay. Of several scenarios evaluated, a breach in Morgan Peninsula produces tidal circulation within the basin supportive of persistent marine incursions in the bay between ~3500 to 2300 cal yr BP. The findings show that slight variations in coastal configuration can have broad-scale effects on bays and estuaries with consequences that may relate to water quality, vertebrate and invertebrate habitat, and coastal vulnerability to episodic events like (extra)tropical storms.

Alabama, Mississippi↗

USGS2019

Temperature mediates secondary dormancy in resting cysts of Pyrodinium bahamense (Dinophyceae)

High‐biomass blooms of the toxic dinoflagellate Pyrodinium bahamense occur most summers in Tampa Bay, Florida, USA, posing a recurring threat to ecosystem health. Like many dinoflagellates, P. bahamense forms immobile resting cysts that can be deposited on the seafloor—creating a seed bank that can retain the organism within the ecosystem and initiate future blooms when cysts germinate. In this study, we examined changes in the dormancy status of cysts collected from Tampa Bay and applied lessons from plant ecology to explore dormancy controls. Pyrodinium bahamense cysts incubated immediately after field collection displayed a seasonal pattern in dormancy and germination that matched the pattern of cell abundance in the water column. Newly deposited (surface) cysts and older (buried) cysts exhibited similar germination patterns, suggesting that a common mechanism regulates dormancy expression in new and mature cysts. Extended cool‐ and warm‐temperature conditioning of field‐collected cysts altered the cycle of dormancy compared with that of cysts in nature, with the duration of cool temperature exposure being the best predictor of when cysts emerged from dormancy. Extended warm conditioning, on the other hand, elicited a return to dormancy, or secondary dormancy, in nondormant cysts. These results directly demonstrate environmental induction of secondary dormancy in dinoflagellates—a mechanism common and thoroughly documented in higher plants with seasonal growth cycles. Our findings support the hypothesis that a seasonal cycle in cyst germination drives P. bahamense bloom periodicity in Tampa Bay and point to environmentally induced secondary dormancy as an important regulatory factor of that cycle.

Florida↗

USGS2019

Recent outer-shelf foraminiferal assemblages on the Carnarvon Ramp and Northwestern Shelf of Western Australia

The carbonate sediments of the Western Australian shelf in the Indian Ocean host diverse assemblages of benthic foraminifera. Environments of the shelf are dominated by the southward-flowing Leeuwin Current, which impacts near-surface circulation and influences biogeographic ranges of Indo-Pacific warm-water foraminifera. Analyses of outer ramp to upper slope sediments (127–264 m water depth) at four different sites (some with replicates) revealed 185 benthic species. A shift from benthic to planktonic foraminifera was accompanied by the decrease of “larger” benthic foraminifera below the lowermost euphotic zone. Fisher α and proportions of buliminid and textularid taxa increased with water depth, as miliolids and rotalids decreased in proportion. Cluster analyses on the 125–250 μm and 250–850 μm size fractions revealed distinct assemblages, with the former distinguishing between deeper and shallower sites, and the latter distinguishing between the Carnarvon Ramp-site in the south and the three sites on the Northwestern Shelf (NWS). The assemblage shift with depth was likely caused by rapidly changing physical conditions in the upper thermocline. The assemblage differences between the NWS and the Carnarvon Ramp indicate limited horizontal transport and migration rates on the outer shelf below the influence of the Leeuwin Current. Similarity in bottom-water temperature at the studied sites indicates that water mass characteristics, biogeographic history or possibly diversity in benthic shelf habitats rather than temperature and depth are responsible for differences between the two regions.

Carnarvon Ramp, Northwestern Shelf↗

USGS2019

Distribution of modern salt-marsh Foraminifera from the eastern Mississippi Sound, U.S.A.

This study documented surface distributions of live and dead foraminiferal assemblages in the low-gradient tidal marshes of the barrier island and estuarine complex of the eastern Mississippi Sound (Grand Bay, Pascagoula River, Fowl River, Dauphin Island). A total of 71,833 specimens representing 38 species were identified from a gradient of different elevation zones across the study area. We identified five live assemblages and nine biofacies for the dead assemblages from estuarine, low marsh, middle marsh, high marsh, and upland transition environments. Although dissolution of calcareous tests was observed in the dead assemblages, characteristic species and abundance patterns dependent on elevation in the intertidal zone were similar between living assemblages and dead biofacies. The assemblages from the eastern Mississippi Sound estuaries were dominated by Ammonia tepida, Cribroelphidium poeyanum, C. excavatum, and Paratrochammina simplissima. The low marshes were dominated by Ammotium salsum, Ammobaculites exiguus, and Miliammina fusca. The dominant species in the middle marshes was Arenoparrella mexicana. The most abundant species in the high marshes was Entzia macrescens. The upland–marsh transition zones were dominated by Trochamminita irregularis and Pseudothurammina limnetis. Canonical correspondence analysis was applied to assess the relationship between a priori defined biofacies and measured environmental data (elevation, grain size, organic matter, and salinity) to test the hypothesis that distribution of foraminiferal assemblages is driven by elevation and hence flooding frequency. Salinity was the second most important explanatory variable of dead assemblages. Riverine freshwater from the Pascagoula River markedly influenced the live and dead assemblages in the Pascagoula River marsh, which was represented by low diversity and densities and dominance by Ammoastuta inepta. The relationship between the measured environmental variables and assemblage distributions can be used in future Mississippi Sound paleo-environmental studies.

Mississippi↗