Geology topics

Bingqing Liu

Publications and source records attributed to Bingqing Liu.

9 recordsLinked to original sources

USGS2026

Short-term estuarine phytoplankton dynamics in response to hurricanes along the Gulf Coast of America: A Variational Autoencoder (VAE) approach with satellite and bio-optical observations

Hurricanes drive diverse estuarine phytoplankton responses and can trigger cascading ecological and physicochemical impacts. Capturing these short-term dynamics requires high spatiotemporal resolution. Here, we applied a globally-applicable coastal ocean color algorithm, Variational Autoencoder (VAE), to Sentinel-2 MSI imagery for chlorophyll- a (Chl- a ) estimation and validated its strong performance across the northern Gulf coast of America (GoA) estuaries, including Galveston Bay (TX), Barataria-Terrebonne Estuary (LA), Apalachicola Estuary (FL) and Tampa Bay (FL). The test set showed strong performance (MAE: 1.44 mg m −3 ; RMSE: 17.7 mg m −3 ; slope: 0.86; median symmetric accuracy: 30.33%). The validated VAE was then applied to 76 Sentinel-2 MSI images to assess phytoplankton biomass responses to hurricanes Harvey (2017), Michael (2018), Ida (2021), Francine (2024), Helene (2024), and Milton (2024) in the GoA estuaries. Results showed that hurricane disturbances on Chl- a typically lasted 3–5 weeks. Estuarine waters west (left) of hurricane tracks showed a rapid decline in Chl- a (∼5 mg m −3 ) due to elevated turbidity from heavy rainfall, and wind-driven flushing in the estuary, followed by a rebound over about two weeks, with Chl- a increasing approximately 10–15 mg m −3 above pre-storm levels. In contrast, right-side waters showed a slower response, likely from oligotrophic seawater intrusion driven by the hurricane's counterclockwise rotation. Post-storm observations showed increased freshwater phytoplankton like chlorophytes and cyanobacteria dominating estuaries, while shelf-waters exhibited elevated dinoflagellates (e.g., Karenia brevis bloom after Hurricane Milton). These results highlight the spatial heterogeneity of hurricane impacts on estuarine phytoplankton dynamics, which may trigger cascading effects on biogeochemical cycling and food webs, potentially prolonging ecosystem recovery.

Alabama, Florida, Louisiana, Mississippi, Texas↗

USGS2026

Hyperspectral retrieval of phytoplankton absorption and community composition from NASA’s PACE-OCI in estuarine–coastal waters using a hybrid framework combining mixture-of-experts and Variational Autoencoder

Retrieving the phytoplankton absorption coefficient (a phy ; m−1), one of the most spectrally rich inherent optical properties, remains challenging in optically complex coastal waters worldwide. Leveraging NASA's new hyperspectral mission, PACE, we introduce Hyper-MoE-VAE, a deep-learning architecture that integrates a Mixture-of-Experts with a Variational Autoencoder to retrieve high-dimensional a phy and subsequent estimation of phytoplankton community composition (PCC) from PACE-OCI hyperspectral remote sensing reflectance (R rs ). Pre-trained on global hyperspectral bio-optical datasets and fine-tuned using regional field R rs –a phy pairings from inland– estuarine–coastal waters, Hyper-MoE-VAE demonstrated strong transferability and effective adaptation across regions. Validation with in-situ Rrs showed accurate aphy retrievals in Lake Erie (NRMSE = 0.12, ε = 17.10), Lake Pontchartrain (NRMSE = 0.11, ε = 37.12), and the Barataria–Terrebonne Estuary (NRMSE = 0.14, ε = 38.89). Using same-day PACE-OCI Level 2 Rrs, the model achieved comparable performance in Lake Erie (NRMSE = 0.19, ε = 55.19), Lake Pontchartrain (NRMSE = 0.14, ε = 51.39), and the Barataria–Terrebonne Estuary (NRMSE = 0.17, ε = 47.92). Hyper-MoE-VAE derived PACE-OCI hyperspectral aphy was further decomposed against mass-specific absorption spectra to estimate group-specific contributions to total chlorophyll a. The resulting PCC showed strong agreement with HPLC–CHEMTAX in Lake Erie ( R 2 = 0.692) and Gulf estuarine–coastal systems ( R 2 = 0.732). Monte Carlo noise experiments further revealed group-dependent sensitivities, with diatoms and dinoflagellates showing moderate susceptibility to noise, while cyanobacteria and cryptophytes exhibited narrow uncertainty distributions. These results demonstrate Hyper-MoE-VAE's capability for regional, operational water-quality monitoring with PACE-OCI and its adaptability to current and future hyperspectral missions.

Great Lakes, Lake Pontchartrain↗

USGS2025

Phytoplankton biomass dynamics in wet (2019) and dry (2023) years in Lake Pontchartrain estuary, Louisiana from Sentinel 2-MSI and PACE-OCI observations

This study provides a comprehensive assessment of phytoplankton biomass dynamics in Lake Pontchartrain, Louisiana, by combining monthly water quality data with multispectral and hyperspectral satellite observations using a machine learning algorithm. A machine learning model based on Variational Autoencoder (VAE), globally applicable, was used to estimate phytoplankton biomass via chlorophyll- a (Chl- a ) from Sentinel 2-MSI and NASA's new hyperspectral mission, PACE-OCI, enabling the first direct comparison between the two sensors. The model performed well in this complex estuarine system, with higher accuracy from PACE-OCI (MAE: 1.48, RMSE: 10.40, slope: 0.87) than Sentinel 2-MSI (MAE: 1.57, RMSE: 11.08, slope: 0.83). This approach enabled continuous high-resolution monitoring of phytoplankton biomass across space and time. Comparative analysis of 2019, a wet year with Bonnet Carré Spillway (BCS) openings, and 2023, a dry year with extremely low riverine inputs, revealed distinct biomass dynamics. In 2019, BCS discharge initially suppressed Chl- a within turbid waters (<5 mg Chl- a m −3 ) but later acted as a nutrient and hydrodynamic driver, transporting nutrients toward the lake outlet and Mississippi coast, promoting high biomass (25–45 mg Chl- a m −3 ) near the entrance. In contrast, dry conditions in 2023 led to more frequent-than-expected high biomass (>35 mg Chl- a m −3 ), persisting in the lake center. Similar spatial patterns were observed again in 2024, revealed for the first time by PACE-OCI. This study demonstrates the value of satellite-derived observations for capturing transient phytoplankton biomass events and highlights the potential of PACE-OCI's hyperspectral capabilities to better distinguish phytoplankton communities and improve understanding of their responses to freshwater inflows and associated processes driving pulses into estuaries.

Louisiana↗

USGS2025

Advancing the implementation of coastal restoration in Louisiana through a co-production of science framework

Coastal Louisiana faces complex challenges from the compounding effects of coastal land loss and climate change. The State of Louisiana’s Coastal Protection and Restoration Authority (CPRA) and the RESTORE Act Center of Excellence for Louisiana (LA-COE) have adopted a co-production of science framework to help ensure that scientific research funded through the LA-COE supports the research needs of CPRA and the Louisiana Coastal Master Plan (CMP), a large-scale coastal restoration plan that outlines activities needed to restore and protect Louisiana’s coast. In this paper, we describe the co-production of science framework established between the LA-COE, CPRA, and research projects funded by the LA-COE. Through an iterative process, the Louisiana CMP is revised every 6 years with improved model and scientific information. The LA-COE leverages the cyclical nature of the CMP by working with CPRA to identify research needs for each Request for Proposals solicited by the LA-COE. The LA-COE proposal review process is structured to include anonymous CPRA review of projects to promote the production of actionable science, and once funded, multiple mechanisms are in place to support collaboration between researchers and CPRA staff. We highlight these mechanisms and provide examples of four LA-COE-funded projects where co-produced science is being used by CPRA to inform the CMP and its implementation. Finally, we discuss challenges of co-production within the confines of funding requirements and review restrictions, highlighting how the LA-COE continues to adapt to navigate these challenges and enhance the implementation of co-production throughout the research funding lifecycle.

Louisiana↗

USGS2025

Lower trophic level monitoring implementation plan for Barataria Basin: Protocols and programmatic management

Prior work completed by Kiskaddon et al. (2021, 2022b, 2022a) identified critical data gaps for Lower Trophic Level (LTL) organisms in Barataria Basin, Louisiana. A Monitoring and Adaptive Management (MAM) Activity Implementation Plan (MAIP) was subsequently developed to describe a MAM Activity that would address and fill these critical data gaps (hereafter termed the “LTL project”). As the lead implementing Trustee of the LTL project, the National Oceanic and Atmospheric Administration (NOAA), in collaboration with the Louisiana Trustee Implementation Group (LA TIG), is charged with implementing the LTL project (NOAA, 2022). The Water Institute (the Institute), in cooperation with federal, state, and private entities including NOAA, the U.S. Geological Survey (USGS), Louisiana State University (LSU), University of Louisiana at Lafayette (UL Lafayette), University of California (UC) Santa Cruz, and Dynamic Solutions, LLC developed this implementation plan to further detail LTL data collection in Barataria Basin that will fulfill the MAIP. This monitoring implementation plan describes procedures and protocols critical for data collection and project management.

Louisiana↗

USGS2024

Identifying and filling critical knowledge gaps can optimize financial viability of blue carbon projects in tidal wetlands

One of the world’s largest “blue carbon” ecosystems, Louisiana’s tidal wetlands on the US Gulf of Mexico coast, is rapidly being lost. Louisiana’s strong legal, regulatory, and monitoring framework, developed for one of the world’s largest tidal wetland systems, provides an opportunity for a programmatic approach to blue carbon accreditation to support restoration of these ecologically and economically important tidal wetlands. Louisiana’s coastal wetlands span ∼1.4 million ha and accumulate 5.5–7.3 Tg yr −1 of blue carbon (organic carbon), ∼6%–8% of tidal marsh blue carbon accumulation globally. Louisiana has a favorable governance framework to advance blue carbon accreditation, due to centralized restoration planning, long term coastal monitoring, and strong legal and regulatory frameworks around carbon. Additional restoration efforts, planned through Louisiana’s Coastal Master Plan, over 50 years are projected to create, or avoid loss of, up to 81,000 ha of wetland. Current restoration funding, primarily from Deepwater Horizon oil spill settlements, will be fully committed by the early 2030s and additional funding sources are required. Existing accreditation methodologies have not been successfully applied to coastal Louisiana’s ecosystem restoration approaches or herbaceous tidal wetland types. Achieving financial viability for accreditation of these restoration and wetland types will require expanded application of existing blue carbon crediting methodologies. It will also require expanded approaches for predicting the future landscape without restoration, such as numerical modeling, to be validated. Additional methodologies (and/or standards) would have many common elements with those currently available but may be beneficial, depending on the goals and needs of both the state of Louisiana and potential purchasers of Louisiana tidal wetland carbon credits. This study identified twenty targeted needs that will address data and knowledge gaps to maximize financial viability of blue carbon accreditation for Louisiana’s tidal wetlands. Knowledge needs were identified in five categories: legislative and policy, accreditation methodologies and standards, soil carbon flux, methane flux, and lateral carbon flux. Due to the large spatial scale and diversity of tidal wetlands, it is expected that progress in coastal Louisiana has high potential to be generalized to similar wetland ecosystems across the northern Gulf of Mexico and globally.

Louisiana↗

USGS2024

Current and future potential net greenhouse gas sinks of existing, converted, and restored marsh and mangrove forest habitats

Marsh and mangrove forest habitats are productive at capturing and storing carbon, thus actions to protect and create coastal blue carbon sinks could help mitigate global warming. Dredged material is often used to create coastal habitats and evaluating the carbon impact of placement alternatives (PA) could help inform restoration and climate policies. Output from a Delft3D-FM morphodynamics and hydrodynamics model informed a Coastal Wetlands Carbon Model at years 2020, 2025, 2030, and 2050. Three model simulations were used and included (1) no restoration (PA1), (2) restoration dominated with mangroves (PA2), and (3) restoration dominated with marshes (PA3) at a different location. Habitats of brackish marsh, saline marsh, mangrove forest, and saline open water that surround Port Fourchon, Louisiana, U.S.A., were evaluated to estimate the net greenhouse gas (GHG) flux of the study area with and without restoration. In years 2020 and 2025, the study area was estimated to be a net GHG sink (−1.1 ± 0.2 MMT CO 2 e) with or without mangrove and marsh-dominated restoration. At years 2030 and 2050, even with habitat loss due to sea-level rise, the study area for all simulations was projected to remain a net GHG sink. At year 2050, +0.1 ± 0.04 MMT CO 2 e could be avoided with restoration. At the restoration project scale, mangrove-dominated restoration (PA2) had net GHG sinks (−0.07 to −0.09 MMT CO 2 e) near the marsh-dominated restoration (PA3, −0.09 to −0.13 MMT CO 2 e). Thus, these modeled results could help inform future restoration planning and climate policies.

Louisiana↗

USGS2023

Dissolved organic carbon dynamics and fluxes in Mississippi-Atchafalaya deltaic system impacted by an extreme flood event and hurricanes: A multi-satellite approach using Sentinel-2/3 and Landsat-8/9 data

Transport of riverine and wetland-derived dissolved organic carbon (DOC) spanning tidal wetlands, estuaries, and continental shelf waters functionally connects terrestrial and aquatic carbon reservoirs, yet the magnitude and ecological significance of this variable and its spatiotemporal linkage remains uncertain for coastal deltaic regions, such as Mississippi River Delta Plain, which includes Mississippi (MR) and Atchafalaya (AR) rivers and estuaries with vast expanses of wetlands and coastal forests. We examined DOC dynamics and fluxes in this large river-dominated wetland-estuarine system for the period between 2019 and 2021 that included an extreme river flood event in 2019, two major hurricanes (Barry in 2019 and Ida in 2021), and cold front passage using an improved adaptive quasi-analytical algorithm (QAA-AD) applied to multi-satellite sensors (Sentinel 3A/B OLCI, Landsat-8/OLI and Sentinel-2A/B MSI) with varying spectral and spatial (10/30/300 m) resolutions. The DOC estimates from multi-satellite sensors in combination with water fluxes were used to assess DOC fluxes from two large rivers (MR and AR) and small channels across the delta plain. Overall, this system delivered a total of 6.7 Tg C yr -1 (1 Tg = 10 12 g) into the estuarine zone and the northern Gulf of Mexico (nGoM) during 2019. High DOC fluxes from the AR (1.3 Tg C yr -1 ) and MR (4.5 Tg C yr -1 ) were associated with the extreme flood event in 2019. Hurricanes that occurred in the study period also contributed to the wetland and estuarine DOC fluxes into continental shelf waters; for example, the passage of Hurricane Barry in July 2019, delivered over a 3-day period ~1.33 ×10 9 g DOC from Barataria Basin into the nGoM. Sentinel 2-MSI land and water classification revealed that Hurricane Ida eroded a total of 1.34×10 8 m 2 of marshes in middle Barataria Basin, converting those habitats into open water with 3.0 m inundation depth and high DOC concentrations (16.4 mg L -1 ), a potentially large DOC source to the coastal waters. Overall, storms and flood events are major sources of DOC flux that facilitate transport of upstream carbon as well as transformation of carbon in the wetlands, through the conversion of vegetated wetland to open water.

Louisiana↗

USGS2023

Climate change mitigation potential of Louisiana's coastal area: Current estimates and future projections

Coastal habitats can play an important role in climate change mitigation. As Louisiana implements its climate action plan and the restoration and risk-reduction projects outlined in its 2017 Louisiana Coastal Master Plan, it is critical to consider potential greenhouse gas (GHG) fluxes in coastal habitats. This study estimated the potential climate mitigation role of existing, converted, and restored coastal habitats for years 2005, 2020, 2025, 2030, and 2050, which align with the Governor of Louisiana's GHG reduction targets. An analytical framework was developed that considered (1) available scientific data on net ecosystem carbon balance fluxes per habitat and (2) habitat areas projected from modeling efforts used for the 2017 Louisiana Coastal Master Plan to estimate the net GHG flux of coastal area. The coastal area was estimated as net GHG sinks of −38.4 ± 10.6 and −43.2 ± 12.0 Tg CO 2 equivalents (CO 2 e) in 2005 and 2020, respectively. The coastal area was projected to remain a net GHG sink in 2025 and 2030, both with and without the implementation of Coastal Master Plan projects (means ranged from −25.3 to −34.2 Tg CO 2 e). By 2050, with model-projected wetland loss and conversion of coastal habitats to open water due to coastal erosion and relative sea level rise, Louisiana's coastal area was projected to become a net source of GHG emissions both with and without the Coastal Master Plan projects. However, in the year 2050, the Louisiana Coastal Master Plan project implementation was projected to avoid the release of +8.8 ± 1.3 Tg CO 2 e compared with an alternative with no action. Reduction in current and future stressors to coastal habitats, including impacts from sea level rise, as well as the implementation of restoration projects could help to ensure coastal areas remain a natural climate solution.

Louisiana↗