Geology topics

Allen Jeffrey Herbst

Publications and source records attributed to Allen Jeffrey Herbst.

5 recordsLinked to original sources

USGS2026

Malady in motion: Chronic wasting disease effects on host movement

Pathogens can have significant impacts on host movement and behavior with consequences for ongoing transmission. For example, chronic wasting disease (CWD) causes severe nutritional deficiencies and neurologic changes, which may alter white-tailed deer ( Odocoileus virginianus ) movement and subsequent transmission risk. Our objectives were to test for changes in movement and habitat selection in deer affected by CWD, and determine the timing of any changes we observed. We leveraged comprehensive movement and mortality data from a large study of free-ranging deer in southwest Wisconsin, a region with high prevalence of CWD. We used necropsy data to identify end stage CWD cases with movement data leading up to death ( n = 44), and sex-, date-, and age-matched test-negative controls. Using GPS collar data, we identified extra-home range excursions and tested for differences in excursion rates, distances, and durations between cases and controls. We evaluated movement characteristics (e.g., movement rates, weekly range sizes) and habitat selection for the two groups, using change point analysis to determine when behavior changes occurred during disease progression. Excursion distances were reduced for CWD cases but were otherwise largely unaffected by infection status. However, CWD cases moved at slower rates and maintained smaller ranges than controls. Habitat selection varied minimally between cases and controls, though CWD cases had an increased preference for proximity to forest edges. While changes in case movement rates and range sizes were detected at or before 6 months prior to death, other movement and habitat selection changes appeared about 2 months prior to death. In addition, CWD cases were frequently in good body condition even within 6 months prior to death, implying that clinically apparent changes occur very late in the disease progression. Our results suggest the occurrence of subclinical and clinical phases of infection, beginning around 6 and 2 months prior to death, respectively. Public communication may therefore benefit from emphasizing that CWD-infected deer are infectious long before they appear sick. Further, because most movement changes occur for very short periods relative to the infectious period of CWD, typical healthy deer movement is likely adequate for representing transmission dynamics for surveillance and management planning.

Wisconsin↗

USGS2026

Digging into soil: Effects of soil texture on RT-QuIC performance for environmental prion surveillance.

Chronic wasting disease (CWD) is a fatal neurodegenerative disease caused by infectious prions affecting wild and captive cervids. Transmission occurs directly between hosts or indirectly through contact with prion-contaminated environments. Soils, particularly those rich in clay, are hypothesized to enhance prion stability, retention, and bioavailability. Accurate detection of prions is therefore important for understanding environmental transmission risks. Real-time quaking-induced conversion (RT-QuIC) is a sensitive assay used to detect PrP CWD in tissue, excreta, and environmental materials. However, RT-QuIC performance across soil textures has not been evaluated. This study assessed RT-QuIC sensitivity and specificity using laboratory-prepared soils spiked with CWD-positive brain homogenate or water controls under a standardized extraction method. Conditional on the extraction method used, results suggest that RT-QuIC performance depends on soil texture, and thus, an optimal time-to-threshold (TTT) cutoff required to balance sensitivity and specificity will also vary with soil texture. RT-QuIC exhibited higher sensitivity and moderate specificity in soils with low clay (<20%) and moderate to high silt content, whereas high-clay soils (>20%) with low to moderate silt content (2%–60%) reduced both sensitivity and specificity, and required shorter TTT cutoffs. These findings highlight the importance of accounting for soil texture in environmental CWD surveillance.

Environmental Science and Technology↗

USGS2025

Overview of North American isolates of chronic wasting disease used for strain research

Chronic Wasting Disease (CWD) is a prion disease that affects Cervidae species, and is the only known prion disease transmitted among wildlife species. The key pathological feature is the conversion of the normal prion protein (PrP C ) misfolding into abnormal forms (PrP Sc ), triggering the onset of CWD infections. The misfolding can generate distinct PrP Sc conformations (strains) giving rise to diverse disease phenotypes encompassing pathology, incubation period, and clinical signs. These phenotypes operationally define distinct prion strains, a pivotal element in monitoring CWD spread and zoonotic potential—a complex endeavor compounded by defining and tracking CWD strains. This review pursues a tripartite objective: 1. to address the intricate challenges inherent in ongoing CWD strain classification; 2. to provide an overview of the known CWD-infected isolates, the strains they represent and their passage history; and 3. to describe the spatial diversity of CWD strains in North America, enriching our understanding of CWD strain dynamics. By delving into these dimensions, this review sheds light on the intricate interplay among polymorphisms, biochemical properties, and clinical expressions of CWD. This endeavor aims to elevate the trajectory of CWD research, advancing our insight into prion disease.

Pathogens↗

USGS2024

Chronic wasting disease: State of the science

Chronic wasting disease (CWD) is a prion disease affecting cervid species, both free-ranging and captive populations. As the geographic range continues to expand and disease prevalence continues to increase, CWD will have an impact on cervid populations, local economies, and ecosystem health. Mitigation of this “wicked” disease will require input from many different stakeholders including hunters, landowners, research biologists, wildlife managers, and others, working together. The NC1209 (North American interdisciplinary chronic wasting disease research consortium) is composed of scientists from different disciplines involved with investigating and managing CWD. Leveraging this broad breadth of expertise, the Consortium has created a state-of-the-science review of five key aspects of CWD, including current diagnostic capabilities for detecting prions, requirements for validating these diagnostics, the role of environmental transmission in CWD dynamics, and potential zoonotic risks associated with CWD. The goal of this review is to increase stakeholders’, managers’, and decision-makers’ understanding of this disease informed by current scientific knowledge.

Pathogens↗

USGS2022

Susceptibility of beavers to chronic wasting disease

Chronic wasting disease (CWD) is a contagious, fatal, neurodegenerative prion disease of cervids. The expanding geographical range and rising prevalence of CWD are increasing the risk of pathogen transfer and spillover of CWD to non-cervid sympatric species. As beavers have close contact with environmental and food sources of CWD infectivity, we hypothesized that they may be susceptible to CWD prions. We evaluated the susceptibility of beavers to prion diseases by challenging transgenic mice expressing beaver prion protein (tgBeaver) with five strains of CWD, four isolates of rodent-adapted prions and one strain of Creutzfeldt–Jakob disease. All CWD strains transmitted to the tgBeaver mice, with attack rates highest from moose CWD and the 116AG and H95+ strains of deer CWD. Mouse-, rat-, and especially hamster-adapted prions were also transmitted with complete attack rates and short incubation periods. We conclude that the beaver prion protein is an excellent substrate for sustaining prion replication and that beavers are at risk for CWD pathogen transfer and spillover.

Biology↗